Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G163900 Carya illinoinensis HOM05D005060 ORTHO05D005975 4.0e-57 224.6 114 100.0
QL07p014517 Quercus lobata HOM05D005060 ORTHO05D005975 9.9e-32 140.2 108 71.3
Haze_20302 Corylus avellana HOM05D005060 ORTHO05D005975 9.2e-30 133.7 112 67.9
Potri.006G029500 Populus trichocarpa HOM05D005060 ORTHO05D005975 1.3e-15 86.7 106 50.0
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 4.6e-13 78.2 106 43.4
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 8.7e-12 73.9 109 40.4
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 3.3e-11 72.0 113 38.1
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 1.3e-10 70.1 113 38.1
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 1.6e-10 69.7 113 38.9
Atru.chr1.1518 Acer truncatum HOM05D005060 ORTHO05D005975 2.1e-10 69.3 108 44.4
Cfa019939 Carpinus fangiana HOM05D005060 ORTHO05D005975 2.8e-10 68.9 56 64.3
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 4.8e-10 68.2 112 41.1
Potri.006G028500 Populus trichocarpa HOM05D005060 ORTHO05D005975 1.1e-09 67.0 106 43.4
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 1.8e-09 66.2 90 42.2
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 1.8e-09 66.2 112 38.4
Sed0011991 Sechium edule HOM05D005060 ORTHO05D005975 1.8e-09 66.2 111 37.8
Manes.08G066600 Manihot esculenta HOM05D005060 ORTHO05D005975 3.1e-09 65.5 111 42.3
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 6.9e-09 64.3 110 41.8
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 1.5e-08 63.2 109 37.6
FvH4_7g05170 Fragaria vesca HOM05D005060 ORTHO05D005975 4.5e-08 61.6 105 41.0
FAN06G0894 Fragaria x ananassa HOM05D005060 ORTHO05D005975 4.5e-08 61.6 105 41.0
FAN06G1820 Fragaria x ananassa HOM05D002241 ORTHO05D002458 4.5e-08 61.6 105 41.0
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 5.8e-08 61.2 104 39.4
Sabra06G0020700 Salix brachista HOM05D005060 ORTHO05D005975 7.6e-08 60.8 106 42.5
Psat0s2745g0280 Pisum sativum HOM05D005060 ORTHO05D005975 1.3e-07 60.1 113 38.9
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 1.3e-07 60.1 111 36.0
Lalb_Chr24g0400621 Lupinus albus HOM05D005060 ORTHO05D005975 2.2e-07 59.3 81 45.7
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 2.2e-07 59.3 108 34.3
FAN10G4368 Fragaria x ananassa HOM05D002241 ORTHO05D002458 2.9e-07 58.9 107 39.3
FAN01G1650 Fragaria x ananassa HOM05D005060 ORTHO05D005975 4.9e-07 58.2 106 36.8
FAN03G0591 Fragaria x ananassa HOM05D005060 ORTHO05D005975 4.9e-07 58.2 99 37.4
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 6.4e-07 57.8 112 35.7
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 6.4e-07 57.8 97 38.1
Prupe.2G065900 Prunus persica HOM05D005060 ORTHO05D005975 1.1e-06 57.0 113 32.7
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 1.1e-06 57.0 112 33.9
GSVIVG01025849001 Vitis vinifera HOM05D005060 ORTHO05D005975 1.1e-06 57.0 110 36.4
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 1.9e-06 56.2 58 51.7
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 1.9e-06 56.2 83 38.6
Sopen10g031600 Solanum pennellii HOM05D005060 ORTHO05D005975 1.9e-06 56.2 109 34.9
Lalb_Chr22g0358011 Lupinus albus HOM05D005060 ORTHO05D005975 4.2e-06 55.1 70 47.1
Manes.13G072000 Manihot esculenta HOM05D005060 ORTHO05D005975 4.2e-06 55.1 110 35.5
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 4.2e-06 55.1 109 34.9
Solyc10g081100.3 Solanum lycopersicum HOM05D005060 ORTHO05D005975 5.5e-06 54.7 109 33.9
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 7.1e-06 54.3 110 31.8
TPR.G27972 Trifolium pratense HOM05D005060 ORTHO05D005975 9.3e-06 53.9 101 37.6
VMungo1383G0657 Vigna mungo HOM05D005060 ORTHO05D005975 9.3e-06 53.9 101 37.6


User provided reference genes

Program Settings