Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 7.0e-201 703.7 357 100.0
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 1.6e-107 393.7 357 65.5
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 4.7e-104 382.1 365 62.2
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 1.5e-86 323.9 309 64.7
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 1.0e-79 301.2 374 51.3
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 3.4e-78 296.2 374 50.8
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 1.7e-77 293.9 371 49.9
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 1.7e-77 293.9 385 49.6
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 4.1e-76 289.3 365 51.0
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 1.6e-75 287.3 372 49.2
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 2.3e-74 283.5 369 50.9
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 1.9e-73 280.4 369 49.1
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 9.5e-73 278.1 369 48.5
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 2.1e-72 276.9 370 51.1
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 1.0e-71 274.6 368 48.4
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 6.4e-69 265.4 367 47.1
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 7.0e-68 261.9 379 47.5
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 2.0e-67 260.4 374 50.8
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 3.0e-66 256.5 338 50.0
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 1.5e-65 254.2 418 45.5
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 2.6e-62 243.4 372 47.0
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 3.2e-60 236.5 409 42.5
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 5.4e-60 235.7 374 43.6
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 2.7e-59 233.4 372 46.0
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 1.9e-57 227.3 407 41.8
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 1.2e-56 224.6 377 44.0
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 3.1e-55 219.9 366 43.2
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 1.5e-54 217.6 304 48.4
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 1.5e-54 217.6 372 40.9
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 2.4e-52 210.3 483 37.1
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 4.6e-51 206.1 403 39.7
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 7.8e-51 205.3 402 41.0
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 5.6e-49 199.1 370 39.5
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 3.6e-48 196.4 373 38.3
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 6.2e-48 195.7 366 40.7
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 3.1e-47 193.4 381 39.1
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 4.0e-47 193.0 358 40.8
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 1.2e-46 191.4 367 41.1
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 2.2e-45 187.2 411 38.4
Cfa010473 Carpinus fangiana HOM05D007667 ORTHO05D008033 6.4e-45 185.7 166 66.9
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 1.9e-44 184.1 431 35.7
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 1.9e-44 184.1 355 40.0
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 1.0e-42 178.3 401 37.7
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 3.9e-42 176.4 354 38.1
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 5.1e-42 176.0 472 30.7
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 1.1e-41 174.9 426 35.7
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 7.3e-41 172.2 374 36.6
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 6.2e-40 169.1 290 42.1
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 1.1e-39 168.3 416 36.3
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 3.4e-38 163.3 425 34.4
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 9.9e-38 161.8 253 45.5
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 1.1e-36 158.3 357 37.3
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 1.6e-35 154.5 241 44.0
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 5.1e-34 149.4 261 43.7
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 4.3e-33 146.4 271 44.3
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 2.1e-32 144.1 378 34.9
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 6.9e-31 139.0 355 35.2
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 2.0e-30 137.5 419 30.8
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 3.4e-30 136.7 379 31.9
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.9e-28 131.0 473 26.8
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 5.5e-28 129.4 461 29.3
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 7.1e-28 129.0 463 28.1
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 1.3e-26 124.8 341 33.7
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 7.4e-25 119.0 264 36.7
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 3.7e-24 116.7 107 56.1
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 1.4e-23 114.8 343 32.1
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 3.1e-23 113.6 245 38.0
ATR1096G118 Amborella trichopoda HOM05D007667 ORTHO05D008033 9.0e-23 112.1 437 30.0
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 1.2e-22 111.7 187 43.3
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 2.6e-22 110.5 370 30.8
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 3.4e-22 110.2 377 32.4
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 4.5e-22 109.8 188 43.1
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 4.5e-22 109.8 164 43.9
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 1.0e-21 108.6 379 33.0
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 1.0e-21 108.6 369 32.5
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 2.2e-21 107.5 271 29.5
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 5.5e-20 102.8 349 30.7
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 1.3e-18 98.2 387 28.7
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 1.9e-17 94.4 379 29.8
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea HOM05D007667 ORTHO05D008033 4.1e-15 86.7 157 42.7
arahy.Tifrunner.gnm1.ann1.8931ZB Arachis hypogaea HOM05D007667 ORTHO05D008033 4.5e-14 83.2 159 42.1
MBI13_g08647_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 1.7e-13 81.3 123 44.7
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 6.5e-13 79.3 401 27.4
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 6.5e-13 79.3 401 27.4
Cpa.g.sc33.176 Carica papaya HOM05D007667 ORTHO05D008033 1.4e-12 78.2 172 40.1
Dinv21555 Davidia involucrata HOM05D007667 ORTHO05D008033 1.4e-12 78.2 87 55.2
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 1.4e-12 78.2 258 30.6
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 1.9e-12 77.8 401 27.2
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 3.2e-12 77.0 395 26.1
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 3.2e-12 77.0 395 26.1
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea HOM05D007667 ORTHO05D008033 4.2e-12 76.6 141 41.8
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 9.3e-12 75.5 403 26.3
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 2.7e-11 73.9 395 25.8
arahy.Tifrunner.gnm1.ann1.NYTL45 Arachis hypogaea HOM05D007667 ORTHO05D008033 6.1e-11 72.8 140 40.0
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 6.1e-11 72.8 289 26.0
AUR62020980 Chenopodium quinoa HOM05D007667 ORTHO05D008033 6.1e-11 72.8 144 36.8
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 7.9e-11 72.4 410 26.3
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 1.3e-10 71.6 385 25.5
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 3.0e-10 70.5 404 25.7
arahy.Tifrunner.gnm1.ann1.48UEJW Arachis hypogaea HOM05D007667 ORTHO05D008033 3.9e-10 70.1 100 46.0
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 6.7e-10 69.3 298 27.2
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 6.7e-10 69.3 395 25.6
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 8.8e-10 68.9 385 25.5
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 8.8e-10 68.9 250 28.0
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 1.1e-09 68.6 400 25.5
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 1.1e-09 68.6 400 25.5
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.1e-09 68.6 136 39.7
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 1.5e-09 68.2 389 25.2
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 1.5e-09 68.2 89 40.4
Ah.04g150340 Amaranthus hybridus HOM05D003123 ORTHO05D003492 1.9e-09 67.8 129 36.4
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 1.9e-09 67.8 413 26.2
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 1.9e-09 67.8 403 24.6
HPP92_014340 Vanilla planifolia HOM05D007667 ORTHO05D008033 2.5e-09 67.4 205 30.7
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 4.3e-09 66.6 76 46.1
MBI13_g08646_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 4.3e-09 66.6 71 49.3
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 1.7e-08 64.7 385 24.4
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 2.2e-08 64.3 259 27.4
unitig_744.g24157 Utricularia gibba HOM05D007667 ORTHO05D008033 6.3e-08 62.8 187 32.1
arahy.Tifrunner.gnm1.ann1.W45WAC Arachis hypogaea HOM05D007667 ORTHO05D008033 8.2e-08 62.4 132 40.2
Os03g0319200 Oryza sativa ssp. japonica HOM05D043175 ORTHO05D008033 3.4e-06 57.0 239 28.0
CDE04G0047 Ceratophyllum demersum HOM05D007667 ORTHO05D008033 4.5e-06 56.6 303 25.7
MBI13_g31583_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 4.5e-06 56.6 125 40.0


User provided reference genes

Program Settings