Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 4.9e-282 973.8 479 100.0
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 3.9e-170 602.1 488 65.6
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 1.6e-136 490.3 493 57.0
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 6.9e-127 458.4 482 55.6
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 5.8e-118 428.7 486 51.0
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 1.6e-115 420.6 497 50.3
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 2.8e-112 409.8 490 51.0
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 5.3e-111 405.6 480 51.0
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 7.9e-107 391.7 504 49.0
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 1.8e-106 390.6 450 52.9
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 1.3e-104 384.4 484 49.2
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 2.6e-102 376.7 481 49.1
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 1.1e-100 371.3 498 47.8
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 1.9e-100 370.5 505 47.1
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 2.5e-100 370.2 491 47.7
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 1.2e-99 367.9 505 46.7
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 2.7e-99 366.7 482 48.1
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 6.1e-99 365.5 490 46.5
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 2.0e-97 360.5 494 45.5
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 3.3e-97 359.8 498 47.4
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 2.8e-96 356.7 488 45.9
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 3.1e-95 353.2 483 47.0
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 4.1e-95 352.8 510 45.7
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 5.3e-95 352.4 522 45.4
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 4.5e-94 349.4 518 44.6
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 4.7e-91 339.3 481 44.7
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 1.4e-90 337.8 481 44.7
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 1.7e-88 330.9 484 46.3
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 5.3e-87 325.9 509 42.4
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 9.1e-87 325.1 401 50.1
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 2.0e-86 323.9 352 52.0
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 2.6e-86 323.6 480 43.8
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 7.7e-86 322.0 255 65.1
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 7.7e-86 322.0 226 69.0
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 2.2e-85 320.5 247 66.0
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 5.0e-85 319.3 483 44.3
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 5.5e-84 315.8 226 68.6
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 1.6e-83 314.3 258 64.3
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 2.1e-83 313.9 359 51.8
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 4.7e-83 312.8 498 43.8
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 1.8e-82 310.8 265 61.1
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 3.0e-82 310.1 238 66.0
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 5.2e-82 309.3 497 42.1
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 1.5e-81 307.8 226 67.7
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 2.0e-81 307.4 361 50.7
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 3.3e-81 306.6 311 53.4
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 4.4e-81 306.2 226 66.4
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 7.5e-81 305.4 416 48.1
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 2.2e-80 303.9 216 68.5
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 2.2e-80 303.9 501 41.1
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 2.2e-80 303.9 226 66.4
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 4.8e-80 302.8 210 69.0
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 1.1e-79 301.6 377 49.1
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 3.1e-79 300.1 210 68.1
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 7.0e-79 298.9 434 45.9
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 9.1e-79 298.5 469 41.8
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 9.1e-79 298.5 339 52.2
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 2.7e-78 297.0 507 41.6
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 4.5e-78 296.2 396 47.7
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 7.7e-78 295.4 327 52.9
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 5.0e-77 292.7 393 47.6
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 5.0e-77 292.7 265 60.0
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 1.5e-76 291.2 192 70.3
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 2.1e-75 287.3 265 58.9
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 3.6e-75 286.6 213 68.1
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 6.1e-75 285.8 220 63.6
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.0e-74 285.0 210 66.7
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 6.3e-72 275.8 206 67.0
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 8.3e-72 275.4 361 46.8
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 9.1e-71 271.9 204 66.7
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 3.5e-70 270.0 174 74.1
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 1.7e-69 267.7 204 65.7
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 1.1e-68 265.0 206 64.1
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 3.5e-62 243.4 193 61.7
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 2.3e-58 230.7 207 58.0
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 2.3e-50 204.1 189 53.4
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 1.1e-42 178.7 120 73.3
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 2.2e-40 171.0 303 39.6
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 7.1e-39 166.0 152 59.9
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 7.3e-36 156.0 366 34.2
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 2.3e-29 134.4 211 38.4
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 9.3e-23 112.5 126 52.4
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 8.1e-19 99.4 161 35.4
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 4.0e-18 97.1 55 80.0
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 6.4e-16 89.7 48 79.2
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 2.3e-13 81.3 77 51.9
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 5.1e-13 80.1 57 68.4
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 6.9e-10 69.7 309 29.4
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 2.0e-09 68.2 47 59.6
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 3.8e-08 63.9 153 30.7
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 3.8e-08 63.9 58 53.4


User provided reference genes

Program Settings