Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 4.3e-164 581.3 293 100.0
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 1.6e-81 307.0 301 59.8
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 9.2e-74 281.2 284 56.3
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 7.8e-73 278.1 284 56.0
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 4.0e-61 239.2 282 57.8
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 2.6e-60 236.5 290 52.4
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 5.1e-56 222.2 280 50.7
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.5e-55 220.7 277 49.5
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 9.6e-55 218.0 276 49.3
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 1.8e-53 213.8 262 52.7
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 6.9e-53 211.8 284 47.5
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 6.9e-53 211.8 270 50.4
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.6e-52 209.9 281 49.8
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 4.4e-52 209.1 270 49.6
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 7.6e-52 208.4 276 47.8
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.3e-51 207.6 296 46.3
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.3e-47 193.0 270 48.5
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 4.3e-47 192.6 268 48.5
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 8.1e-46 188.3 278 47.1
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 1.8e-45 187.2 277 45.5
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 1.8e-45 187.2 255 48.2
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 2.4e-45 186.8 280 45.4
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.4e-45 186.8 280 45.4
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.1e-45 186.4 274 46.4
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 6.9e-45 185.3 257 52.1
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 1.2e-44 184.5 307 43.3
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 5.8e-44 182.2 271 46.5
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.3e-43 181.0 252 49.2
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 2.2e-43 180.3 272 46.0
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 2.9e-43 179.9 275 44.7
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 2.9e-43 179.9 275 45.8
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 6.4e-43 178.7 290 46.9
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 1.9e-42 177.2 274 46.7
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 5.4e-42 175.6 269 46.1
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.7e-41 173.3 269 45.4
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 6.0e-41 172.2 261 48.7
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 6.0e-41 172.2 267 46.4
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 1.0e-40 171.4 274 44.2
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 3.9e-40 169.5 258 46.1
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 6.7e-40 168.7 219 49.8
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 1.6e-38 164.1 256 46.9
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 3.7e-38 162.9 261 45.6
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 4.8e-38 162.5 266 45.5
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 1.1e-37 161.4 290 43.4
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.4e-37 161.0 269 43.9
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.8e-37 160.6 281 44.8
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 2.4e-37 160.2 254 43.7
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 5.3e-37 159.1 255 46.3
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.3e-37 159.1 251 46.6
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 9.0e-37 158.3 268 42.2
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 2.9e-35 153.3 271 43.5
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.8e-35 152.9 251 45.4
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 4.9e-35 152.5 251 45.4
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 1.9e-34 150.6 257 41.2
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 2.5e-34 150.2 246 45.9
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 7.1e-34 148.7 223 42.6
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 7.1e-34 148.7 261 42.1
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 2.1e-33 147.1 284 40.5
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.8e-32 144.1 258 41.5
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 3.0e-32 143.3 289 39.4
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 6.7e-32 142.1 248 42.7
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 1.1e-31 141.4 257 39.3
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 1.1e-31 141.4 264 41.7
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 1.9e-31 140.6 272 42.3
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 5.7e-31 139.0 284 40.5
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 1.3e-30 137.9 151 50.3
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 3.1e-29 133.3 269 38.3
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 5.3e-29 132.5 254 41.3
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 2.0e-28 130.6 269 37.5
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 4.5e-28 129.4 258 41.1
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 7.6e-28 128.6 272 37.9
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 1.3e-27 127.9 259 37.1
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 1.3e-27 127.9 251 40.2
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 5.0e-27 125.9 274 35.8
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 1.4e-26 124.4 262 37.8
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 3.2e-26 123.2 337 33.5
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 4.2e-26 122.9 266 36.8
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 5.5e-26 122.5 268 38.4
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.2e-25 121.3 269 37.5
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 1.6e-25 120.9 293 35.8
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 2.7e-25 120.2 265 40.0
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.7e-25 120.2 280 38.6
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 2.7e-25 120.2 244 36.9
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.0e-24 118.2 273 34.4
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 1.0e-24 118.2 133 54.1
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.8e-24 117.5 265 38.9
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 5.1e-24 115.9 267 39.3
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.1e-23 114.8 284 37.0
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 1.5e-23 114.4 268 38.1
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.5e-23 114.4 265 38.5
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 3.3e-23 113.2 257 40.1
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 7.4e-23 112.1 263 36.9
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 9.7e-23 111.7 265 35.1
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 2.2e-22 110.5 264 36.0
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.7e-22 109.8 259 37.1
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.7e-22 109.8 245 39.2
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 8.2e-22 108.6 264 35.6
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 1.4e-21 107.8 251 37.8
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 1.8e-21 107.5 271 36.5
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 2.6e-20 103.6 263 34.6
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 1.0e-19 101.7 268 35.1
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 1.3e-19 101.3 254 34.3
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.3e-19 101.3 268 34.7
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 3.8e-19 99.8 362 29.8
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.0e-19 99.4 256 36.7
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 5.0e-19 99.4 256 36.7
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.2e-17 94.7 134 43.3
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 1.6e-17 94.4 227 38.3
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 2.1e-17 94.0 135 45.9
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 2.3e-16 90.5 171 41.5
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 2.0e-15 87.4 220 34.1
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 5.7e-15 85.9 245 33.9
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 2.2e-14 84.0 303 32.0
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 7.7e-12 75.5 82 51.2
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 2.2e-11 73.9 163 41.7
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.0e-08 65.1 219 31.5
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 4.4e-07 59.7 72 48.6


User provided reference genes

Program Settings