Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G150900 Carya illinoinensis HOM05D008798 ORTHO05D011016 1.1e-218 763.1 393 100.0
Cfa000742 Carpinus fangiana HOM05D008798 ORTHO05D011016 2.7e-161 572.4 374 77.8
Duzib160G0760 Durio zibethinus HOM05D008798 ORTHO05D011016 1.5e-127 460.3 397 58.7
Atru.chr5.2787 Acer truncatum HOM05D008798 ORTHO05D011016 1.2e-124 450.7 397 59.7
Dinv15940 Davidia involucrata HOM05D008798 ORTHO05D011016 1.5e-124 450.3 398 59.5
Ciclev10015548m.g Citrus clementina HOM05D008798 ORTHO05D011016 9.3e-122 441.0 392 55.6
Potri.003G149300 Populus trichocarpa HOM05D008798 ORTHO05D011016 1.0e-120 437.6 395 57.7
Manes.16G054300 Manihot esculenta HOM05D008798 ORTHO05D011016 1.3e-118 430.6 400 57.8
Potri.001G081100 Populus trichocarpa HOM05D008798 ORTHO05D011016 4.8e-118 428.7 401 57.4
Gorai.011G050900 Gossypium raimondii HOM05D008798 ORTHO05D011016 3.1e-117 426.0 393 54.7
GSVIVG01013644001 Vitis vinifera HOM05D008798 ORTHO05D011016 6.9e-117 424.9 398 55.8
Gohir.D10G047800 Gossypium hirsutum HOM05D008798 ORTHO05D011016 3.4e-116 422.5 393 54.5
TAR626G1932 Trochodendron aralioides HOM05D008798 ORTHO05D011016 1.9e-114 416.8 368 56.8
Gohir.A10G046500 Gossypium hirsutum HOM05D008798 ORTHO05D011016 2.7e-113 412.9 401 53.4
Dinv15941 Davidia involucrata HOM05D008798 ORTHO05D011016 6.1e-113 411.8 337 61.1
TWI09G1085 Tripterygium wilfordii HOM05D008798 ORTHO05D011016 9.7e-111 404.4 361 57.3
CSS0041632 Camellia sinensis var. sinensis HOM05D008798 ORTHO05D011016 5.3e-109 398.7 376 55.1
DCAR_003802 Daucus carota HOM05D008798 ORTHO05D011016 1.7e-107 393.7 390 52.6
Eucgr.E04362 Eucalyptus grandis HOM05D008798 ORTHO05D011016 1.4e-106 390.6 371 54.4
Eucgr.E02024 Eucalyptus grandis HOM05D008798 ORTHO05D011016 2.5e-106 389.8 371 54.4
vmacro03488 Vaccinium macrocarpon HOM05D008798 ORTHO05D011016 5.3e-93 345.5 398 49.0
Rhsim13G0127600 Rhododendron simsii HOM05D008798 ORTHO05D011016 5.9e-92 342.0 392 47.4
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 1.8e-85 320.5 381 44.9
Thecc.06G136100 Theobroma cacao HOM05D008798 ORTHO05D011016 4.2e-82 309.3 263 60.5
Zm00001eb213680 Zea mays HOM05D008798 ORTHO05D011016 1.0e-64 251.5 366 38.0
SEGI_41343 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 1.5e-63 247.7 361 36.6
ATR0763G057 Amborella trichopoda HOM05D008798 ORTHO05D011016 6.4e-62 242.3 263 47.1
Hma1.2p1_1159F.1_g262420 Hydrangea macrophylla HOM05D008798 ORTHO05D011016 5.8e-55 219.2 229 52.8
Os03g0777600 Oryza sativa ssp. japonica HOM05D008798 ORTHO05D011016 8.9e-48 195.3 289 37.7
Haze_05996 Corylus avellana HOM05D008798 ORTHO05D011016 2.4e-45 187.2 144 68.8
Zm00001eb123420 Zea mays HOM05D008798 ORTHO05D011016 3.5e-44 183.3 200 44.5
Haze_05995 Corylus avellana HOM05D008798 ORTHO05D011016 1.1e-37 161.8 105 74.3
Pp3c9_12300 Physcomitrium patens HOM05D008798 ORTHO05D011016 3.3e-34 150.2 356 29.5
Pp3c9_15430 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.6e-33 147.9 369 28.5
Mapoly0044s0079 Marchantia polymorpha HOM05D008798 ORTHO05D011016 1.6e-28 131.3 372 25.8
SMO367G1240 Selaginella moellendorffii HOM05D009232 ORTHO05D013348 5.1e-27 126.3 328 28.0
AagrBONN_evm.TU.Sc2ySwM_344.179 Anthoceros agrestis HOM05D008798 ORTHO05D011016 1.1e-26 125.2 329 28.9
Pp3c23_9830 Physcomitrium patens HOM05D008798 ORTHO05D011016 9.0e-24 115.5 369 26.0
Pp3c20_17720 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.5e-23 114.8 370 25.7
Zm00001eb431530 Zea mays HOM05D008798 ORTHO05D011016 1.3e-19 101.7 115 46.1
SEGI_25661 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 7.1e-13 79.3 105 39.0
MBI01_g35739_MAGBIO Magnolia biondii HOM05D008798 ORTHO05D000004 3.5e-12 77.0 68 54.4
CBR_g6349 Chara braunii HOM05D000186 ORTHO05D000347 4.3e-10 70.1 268 23.1
ATR0168G001 Amborella trichopoda HOM05D008798 ORTHO05D011016 1.1e-08 65.5 60 50.0


User provided reference genes

Program Settings