Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 6.3e-163 577.4 296 100.0
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 9.8e-140 500.4 297 87.2
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 3.5e-137 491.9 301 83.4
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 3.6e-134 481.9 294 84.0
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 1.0e-133 480.3 297 82.5
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 1.8e-133 479.6 297 82.5
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 1.8e-133 479.6 341 75.1
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 2.3e-133 479.2 295 82.4
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.3e-133 479.2 298 80.9
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.3e-133 479.2 298 80.9
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 8.8e-133 477.2 298 81.5
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 8.8e-133 477.2 296 82.4
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 1.5e-132 476.5 297 80.5
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 1.5e-132 476.5 297 82.5
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 3.4e-132 475.3 296 82.4
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 1.7e-131 473.0 297 81.1
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 2.8e-131 472.2 296 81.8
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 4.9e-131 471.5 297 79.8
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 1.1e-130 470.3 298 78.9
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 1.4e-130 469.9 297 80.1
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 2.4e-130 469.2 305 79.0
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 3.1e-130 468.8 305 79.0
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 4.1e-130 468.4 297 81.1
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 9.2e-130 467.2 296 80.7
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 9.2e-130 467.2 297 78.8
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 1.2e-129 466.8 297 78.8
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 2.0e-129 466.1 297 78.5
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 2.7e-129 465.7 297 80.5
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 2.7e-129 465.7 296 80.4
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 3.5e-129 465.3 297 79.8
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 4.5e-129 464.9 294 81.0
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 5.9e-129 464.5 297 79.8
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 5.9e-129 464.5 297 80.1
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 7.7e-129 464.2 297 78.8
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 1.3e-128 463.4 296 79.4
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 2.9e-128 462.2 297 80.5
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 6.6e-128 461.1 295 77.3
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 6.6e-128 461.1 294 77.6
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 6.6e-128 461.1 294 77.6
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 8.6e-128 460.7 296 79.4
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 1.1e-127 460.3 297 77.1
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 1.1e-127 460.3 297 78.8
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.5e-127 459.9 297 77.1
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 1.5e-127 459.9 297 79.1
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 1.5e-127 459.9 298 78.2
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 1.9e-127 459.5 296 78.0
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 3.3e-127 458.8 296 80.7
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 7.3e-127 457.6 296 76.4
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 1.2e-126 456.8 298 78.5
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 2.8e-126 455.7 297 77.4
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 3.6e-126 455.3 299 78.3
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 4.7e-126 454.9 315 73.7
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 8.0e-126 454.1 296 77.0
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.0e-125 453.8 315 74.0
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 1.4e-125 453.4 292 77.4
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 2.3e-125 452.6 297 77.1
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 5.2e-125 451.4 297 78.5
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 6.8e-125 451.1 314 72.6
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 1.5e-124 449.9 297 78.1
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 1.5e-124 449.9 297 77.4
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 9.8e-124 447.2 295 76.6
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 9.8e-124 447.2 294 76.2
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 1.3e-123 446.8 297 75.1
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 1.3e-123 446.8 294 75.9
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 1.3e-123 446.8 294 75.9
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 1.7e-123 446.4 297 76.8
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 3.7e-123 445.3 297 76.8
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 6.4e-123 444.5 296 75.3
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 8.3e-123 444.1 298 76.8
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 1.1e-122 443.7 297 75.8
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 2.4e-122 442.6 296 75.7
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 4.1e-122 441.8 292 75.7
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 5.4e-122 441.4 294 74.8
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 1.6e-121 439.9 293 74.4
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 2.0e-121 439.5 295 77.3
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 1.3e-120 436.8 282 79.1
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 1.7e-120 436.4 297 74.7
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 1.1e-119 433.7 296 74.0
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 1.1e-119 433.7 294 74.8
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 1.5e-119 433.3 294 74.8
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 1.9e-119 433.0 297 73.7
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 3.3e-119 432.2 297 73.7
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 3.3e-119 432.2 262 82.4
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 3.3e-119 432.2 296 73.6
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 4.3e-119 431.8 294 74.1
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 9.5e-119 430.6 297 73.7
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 9.5e-119 430.6 297 75.1
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 1.2e-118 430.3 277 80.1
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 1.6e-118 429.9 294 73.5
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 2.1e-118 429.5 294 73.8
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 2.1e-118 429.5 282 77.0
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 3.6e-118 428.7 294 73.5
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 4.7e-118 428.3 299 73.2
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 8.0e-118 427.6 294 72.8
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 8.0e-118 427.6 294 72.4
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 8.0e-118 427.6 296 73.0
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.0e-117 427.2 297 74.4
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 1.0e-117 427.2 295 74.2
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 2.3e-117 426.0 298 72.8
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 1.2e-116 423.7 294 72.8
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 1.2e-116 423.7 294 72.8
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 1.5e-116 423.3 289 74.4
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 7.5e-116 421.0 281 75.1
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 1.3e-115 420.2 294 72.1
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 1.9e-114 416.4 294 71.8
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 7.8e-113 411.0 296 72.6
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.3e-112 409.5 250 82.0
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 5.0e-112 408.3 294 71.1
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 2.3e-109 399.4 297 73.4
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.7e-105 386.0 320 65.0
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 1.3e-99 367.1 219 83.6
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.7e-96 356.7 293 58.7
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 7.3e-95 351.3 223 79.8
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 9.6e-95 350.9 296 62.2
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 4.7e-94 348.6 222 78.4
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 2.6e-92 342.8 222 77.5
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 1.4e-90 337.0 293 58.0
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 3.2e-90 335.9 279 64.2
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 5.4e-90 335.1 216 75.5
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 6.0e-89 331.6 289 58.8
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 6.6e-88 328.2 293 57.3
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.1e-87 327.4 293 57.0
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 7.3e-87 324.7 275 64.0
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 1.6e-86 323.6 262 59.5
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 2.7e-81 306.2 220 69.1
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 4.6e-81 305.4 295 54.6
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 7.1e-74 281.6 175 81.1
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 1.0e-72 277.7 252 60.3
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 1.7e-67 260.4 256 52.7
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 2.5e-66 256.5 223 60.5
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 6.9e-61 238.4 150 80.7
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 4.5e-60 235.7 203 63.5
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 1.0e-56 224.6 165 66.7
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 2.5e-55 219.9 149 73.2
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 1.1e-53 214.5 143 69.2
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.4e-53 214.2 135 77.8
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 3.1e-45 186.4 266 37.6
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 5.5e-42 175.6 181 53.6
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 1.0e-40 171.4 138 63.8
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 1.4e-37 161.0 105 74.3
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 6.7e-32 142.1 302 32.1
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 1.5e-31 141.0 106 67.9
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 5.7e-31 139.0 99 65.7
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 1.3e-30 137.9 132 59.1
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 4.7e-25 119.4 270 28.5
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 3.7e-22 109.8 81 69.1
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 4.8e-22 109.4 116 54.3
Cc09_g04070 Coffea canephora HOM05D004415 ORTHO05D005198 2.7e-20 103.6 66 78.8
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 4.5e-20 102.8 126 49.2
arahy.Tifrunner.gnm1.ann1.LII2ER Arachis hypogaea HOM05D004415 ORTHO05D005198 4.0e-16 89.7 106 49.1
arahy.Tifrunner.gnm1.ann1.8SCZ96 Arachis hypogaea HOM05D004415 ORTHO05D005198 9.8e-15 85.1 106 47.2
BcaB03g15995 Brassica carinata HOM05D004415 ORTHO05D005198 8.6e-11 72.0 94 47.9
HanXRQChr04g0119531 Helianthus annuus HOM05D004415 ORTHO05D005198 7.3e-10 68.9 39 82.1
GSVIVG01003362001 Vitis vinifera HOM05D004415 ORTHO05D005198 3.6e-09 66.6 52 65.4
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 1.8e-08 64.3 45 64.4
GSVIVG01005645001 Vitis vinifera HOM05D004415 ORTHO05D005198 4.0e-08 63.2 52 61.5
GSVIVG01032305001 Vitis vinifera HOM05D004415 ORTHO05D005198 4.0e-08 63.2 52 61.5


User provided reference genes

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