Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.2e-81 306.6 167 100.0
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.1e-38 161.4 169 59.2
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 1.3e-24 117.1 162 54.9
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 2.5e-23 112.8 177 51.4
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 3.2e-23 112.5 135 48.9
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 4.7e-22 108.6 149 47.7
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.8e-21 106.7 134 45.5
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 3.7e-19 99.0 125 49.6
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 2.4e-18 96.3 155 42.6
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 9.1e-18 94.4 164 40.9
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 4.5e-17 92.0 145 43.4
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 1.3e-16 90.5 137 43.1
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 5.0e-16 88.6 167 38.9
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 5.0e-16 88.6 134 42.5
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 5.0e-16 88.6 132 44.7
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 8.5e-16 87.8 131 42.7
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 8.5e-16 87.8 160 41.9
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 1.1e-15 87.4 130 43.8
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.1e-15 87.4 145 44.1
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 2.5e-15 86.3 137 38.7
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 4.2e-15 85.5 152 42.1
QL05p061901 Quercus lobata HOM05D005932 ORTHO05D006213 4.2e-15 85.5 195 40.0
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 7.2e-15 84.7 108 46.3
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 1.2e-14 84.0 143 43.4
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.6e-14 83.6 123 42.3
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 1.6e-14 83.6 158 37.3
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.1e-14 83.2 127 43.3
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.7e-14 82.8 127 44.1
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 3.6e-14 82.4 127 43.3
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 3.6e-14 82.4 162 38.9
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 4.7e-14 82.0 142 42.3
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 4.7e-14 82.0 127 42.5
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 4.7e-14 82.0 127 42.5
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 4.7e-14 82.0 129 44.2
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.0e-13 80.9 146 42.5
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 1.8e-13 80.1 126 42.1
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 4.0e-13 79.0 127 42.5
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 4.0e-13 79.0 130 40.8
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 6.7e-13 78.2 128 39.8
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 6.7e-13 78.2 116 43.1
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 6.7e-13 78.2 128 40.6
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 8.8e-13 77.8 129 40.3
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.5e-12 77.0 125 44.0
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 3.3e-12 75.9 155 41.3
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 7.5e-12 74.7 132 40.2
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 1.3e-11 73.9 120 39.2
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.3e-11 73.9 108 45.4
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 8.2e-11 71.2 139 34.5
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 1.1e-10 70.9 138 36.2
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.4e-10 70.5 133 38.3
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 2.4e-10 69.7 137 38.0
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 4.1e-10 68.9 137 35.8
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 7.0e-10 68.2 125 37.6
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 9.1e-10 67.8 129 38.0
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 1.2e-09 67.4 129 38.0
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.6e-09 67.0 120 40.0
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.6e-09 67.0 130 41.5
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 2.0e-09 66.6 120 40.8
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 2.7e-09 66.2 129 41.1
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.7e-09 66.2 128 39.1
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 4.5e-09 65.5 129 38.8
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 4.5e-09 65.5 114 39.5
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 7.7e-09 64.7 131 39.7
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 7.7e-09 64.7 131 39.7
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 7.7e-09 64.7 131 39.7
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.0e-08 64.3 124 38.7
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.0e-08 64.3 143 39.2
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 1.3e-08 63.9 120 39.2
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.7e-08 63.5 123 42.3
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 1.7e-08 63.5 138 34.8
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 1.7e-08 63.5 129 38.0
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 1.7e-08 63.5 114 39.5
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 3.8e-08 62.4 133 37.6
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 3.8e-08 62.4 155 34.2
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 5.0e-08 62.0 122 37.7
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 5.0e-08 62.0 131 33.6
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 6.5e-08 61.6 143 36.4
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 8.5e-08 61.2 132 37.9
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 8.5e-08 61.2 117 36.8
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 1.5e-07 60.5 137 32.8
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 1.5e-07 60.5 167 35.3
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 1.5e-07 60.5 127 35.4
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 2.5e-07 59.7 129 36.4
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 2.5e-07 59.7 130 38.5
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 3.2e-07 59.3 111 43.2
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 3.2e-07 59.3 163 34.4
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 5.5e-07 58.5 145 34.5
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 7.2e-07 58.2 166 33.7
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 7.2e-07 58.2 128 39.8
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 1.2e-06 57.4 125 36.0
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 1.6e-06 57.0 127 37.0
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 1.6e-06 57.0 132 37.9
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 1.6e-06 57.0 126 34.1
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 2.1e-06 56.6 132 34.1
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 2.1e-06 56.6 117 32.5
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 2.1e-06 56.6 132 31.8
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 2.1e-06 56.6 126 34.1
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 4.7e-06 55.5 133 28.6
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 6.1e-06 55.1 135 34.1
Thhalv10009012m.g Eutrema salsugineum HOM05D012212 ORTHO05D006213 8.0e-06 54.7 142 34.5


User provided reference genes

Program Settings