Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 4.2e-82 308.5 226 100.0
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 1.4e-58 230.3 137 86.9
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 1.4e-58 230.3 139 84.2
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 6.7e-56 221.5 135 83.0
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 4.3e-55 218.8 139 79.1
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 4.8e-54 215.3 137 82.5
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 4.8e-54 215.3 137 79.6
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 4.8e-54 215.3 137 79.6
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.1e-53 214.2 131 82.4
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 4.1e-53 212.2 139 76.3
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 6.9e-53 211.5 135 79.3
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 1.2e-52 210.7 135 77.8
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 1.5e-52 210.3 135 76.3
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 1.5e-52 210.3 137 79.6
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 1.5e-52 210.3 135 80.0
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 1.5e-52 210.3 137 78.1
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 2.6e-52 209.5 139 77.7
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 1.0e-51 207.6 137 76.6
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 1.7e-51 206.8 137 79.6
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 1.7e-51 206.8 135 77.0
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 3.8e-51 205.7 139 78.4
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 8.4e-51 204.5 134 75.4
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 8.4e-51 204.5 138 78.3
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 8.4e-51 204.5 134 75.4
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 8.4e-51 204.5 137 73.0
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 1.1e-50 204.1 135 76.3
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 1.1e-50 204.1 135 76.3
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 1.4e-50 203.8 137 72.3
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 2.5e-50 203.0 139 77.0
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 7.2e-50 201.4 137 75.9
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 9.3e-50 201.1 135 77.0
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 9.3e-50 201.1 135 77.0
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 9.3e-50 201.1 139 74.1
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 1.6e-49 200.3 137 75.9
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 1.6e-49 200.3 139 76.3
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 2.1e-49 199.9 136 75.0
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 2.1e-49 199.9 137 75.9
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 7.9e-49 198.0 137 74.5
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.0e-48 197.6 135 71.9
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 1.3e-48 197.2 137 72.3
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 1.3e-48 197.2 139 73.4
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 2.3e-48 196.4 138 74.6
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.3e-48 196.4 138 74.6
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 2.3e-48 196.4 138 75.4
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.0e-48 196.1 138 74.6
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 3.0e-48 196.1 137 75.9
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 3.0e-48 196.1 231 54.5
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 3.9e-48 195.7 135 71.9
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 6.7e-48 194.9 138 73.9
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 6.7e-48 194.9 133 73.7
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 6.7e-48 194.9 135 72.6
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 6.7e-48 194.9 136 72.8
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 8.7e-48 194.5 135 74.1
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 1.5e-47 193.7 135 75.6
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 1.9e-47 193.4 137 70.8
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.5e-47 193.0 138 73.2
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 5.7e-47 191.8 137 75.9
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 5.7e-47 191.8 138 72.5
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 7.4e-47 191.4 137 74.5
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 1.3e-46 190.7 136 72.8
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 1.6e-46 190.3 133 75.9
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 2.8e-46 189.5 135 70.4
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 8.2e-46 188.0 135 71.1
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 1.8e-45 186.8 137 69.3
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 3.1e-45 186.0 137 70.1
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 1.3e-43 180.6 137 67.2
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.3e-43 180.6 138 71.0
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 1.3e-43 180.6 126 71.4
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.7e-43 180.3 135 68.9
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 2.2e-43 179.9 137 65.7
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 2.9e-43 179.5 135 63.7
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 2.9e-43 179.5 135 68.1
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 3.8e-43 179.1 131 69.5
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 5.0e-43 178.7 135 67.4
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 5.0e-43 178.7 134 70.1
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 6.5e-43 178.3 131 71.0
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 8.5e-43 177.9 137 65.7
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.1e-42 177.6 135 68.9
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 1.9e-42 176.8 135 65.2
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 5.5e-42 175.3 135 67.4
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 7.2e-42 174.9 132 67.4
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 9.4e-42 174.5 135 67.4
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-41 174.1 135 65.2
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 1.2e-41 174.1 135 65.2
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 1.2e-41 174.1 135 65.2
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 1.2e-41 174.1 135 65.2
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 1.2e-41 174.1 135 65.2
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 1.2e-41 174.1 131 67.9
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 1.2e-41 174.1 137 63.5
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 1.6e-41 173.7 135 63.0
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 2.7e-41 172.9 135 63.7
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 2.7e-41 172.9 135 63.7
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 3.6e-41 172.6 137 66.4
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 4.6e-41 172.2 135 63.7
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 4.6e-41 172.2 135 63.0
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 6.1e-41 171.8 135 63.0
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 1.4e-40 170.6 131 67.2
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 2.3e-40 169.9 135 62.2
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 2.3e-40 169.9 135 63.7
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 3.9e-40 169.1 132 65.9
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 3.3e-39 166.0 130 69.2
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 1.3e-38 164.1 131 64.9
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 2.8e-38 162.9 133 62.4
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 2.8e-38 162.9 133 62.4
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.4e-37 160.6 116 71.6
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 5.3e-37 158.7 135 61.5
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 7.7e-36 154.8 131 61.8
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 6.5e-35 151.8 141 61.0
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 8.5e-35 151.4 135 59.3
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.4e-34 150.6 135 61.5
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 9.4e-34 147.9 131 59.5
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.1e-33 146.7 135 59.3
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 6.1e-33 145.2 139 56.1
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 1.4e-32 144.1 139 56.1
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 1.4e-32 144.1 139 56.1
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 1.8e-32 143.7 139 55.4
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.8e-32 143.7 103 69.9
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 3.0e-32 142.9 139 55.4
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 3.9e-32 142.5 137 54.7
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 3.9e-32 142.5 137 54.7
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 3.9e-32 142.5 137 54.7
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 8.8e-32 141.4 137 54.0
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 8.8e-32 141.4 137 54.0
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 8.8e-32 141.4 137 54.0
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 2.0e-31 140.2 138 56.5
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 7.0e-29 131.7 139 52.5
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.6e-28 130.6 98 67.3
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 2.0e-28 130.2 131 51.9
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 4.2e-26 122.5 115 61.7
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 2.1e-25 120.2 137 52.6
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 1.4e-24 117.5 135 51.9
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 6.7e-24 115.2 132 52.3
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 2.0e-23 113.6 138 50.7
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 2.0e-23 113.6 138 50.7
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 4.4e-23 112.5 70 80.0
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 4.5e-20 102.4 113 58.4
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 1.9e-18 97.1 69 72.5
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 1.4e-08 64.3 133 34.6
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 4.4e-07 59.3 58 53.4
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 4.4e-07 59.3 69 49.3


User provided reference genes

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