Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G136400 Carya illinoinensis HOM05D007852 ORTHO05D009916 5.4e-58 227.6 130 100.0
Sed0006029 Sechium edule HOM05D007852 ORTHO05D009916 8.1e-14 80.9 86 50.0
Hma1.2p1_1749F.1_g300710 Hydrangea macrophylla HOM05D007852 ORTHO05D009916 1.4e-13 80.1 81 50.6
GSVIVG01021272001 Vitis vinifera HOM05D007852 ORTHO05D009916 6.9e-13 77.8 75 49.3
COL.COLO4_31211 Corchorus olitorius HOM05D007852 ORTHO05D009916 1.5e-12 76.6 80 50.0
RcHm_v2.0_Chr5g0011991 Rosa chinensis HOM05D007852 ORTHO05D009916 2.0e-12 76.3 58 60.3
Prupe.4G068400 Prunus persica HOM05D007852 ORTHO05D009916 2.6e-12 75.9 90 46.7
QL05p050225 Quercus lobata HOM05D007852 ORTHO05D009916 4.4e-12 75.1 80 50.0
TWI09G0702 Tripterygium wilfordii HOM05D007852 ORTHO05D009916 4.4e-12 75.1 54 57.4
Atru.chr10.1525 Acer truncatum HOM05D007852 ORTHO05D009916 5.8e-12 74.7 76 44.7
ClCG03G007370 Citrullus lanatus HOM05D007852 ORTHO05D009916 5.8e-12 74.7 62 59.7
Dinv12735 Davidia involucrata HOM05D007852 ORTHO05D009916 7.6e-12 74.3 60 55.0
Duzib235G0245 Durio zibethinus HOM05D007852 ORTHO05D009916 1.7e-11 73.2 90 47.8
MELO3C002684.2 Cucumis melo HOM05D007852 ORTHO05D009916 2.2e-11 72.8 65 56.9
FAN21G2050 Fragaria x ananassa HOM05D007852 ORTHO05D009916 2.9e-11 72.4 63 50.8
Ciclev10018381m.g Citrus clementina HOM05D007852 ORTHO05D009916 6.4e-11 71.2 82 47.6
Gohir.D06G206100 Gossypium hirsutum HOM05D007852 ORTHO05D009916 6.4e-11 71.2 46 60.9
Gorai.010G240500 Gossypium raimondii HOM05D007852 ORTHO05D009916 6.4e-11 71.2 46 60.9
Manes.16G043700 Manihot esculenta HOM05D007852 ORTHO05D009916 8.4e-11 70.9 51 56.9
Thecc.06G163700 Theobroma cacao HOM05D007852 ORTHO05D009916 1.1e-10 70.5 62 51.6
Gohir.A06G198800 Gossypium hirsutum HOM05D007852 ORTHO05D009916 1.4e-10 70.1 58 55.2
Potri.004G062700 Populus trichocarpa HOM05D007852 ORTHO05D009916 1.4e-10 70.1 48 56.2
MELO3C017616.2 Cucumis melo HOM05D007852 ORTHO05D009916 1.9e-10 69.7 65 55.4
Nn3g21053 Nelumbo nucifera HOM05D007852 ORTHO05D009916 4.2e-10 68.6 84 47.6
FAN16G0821 Fragaria x ananassa HOM05D007852 ORTHO05D009916 5.4e-10 68.2 63 49.2
Ciclev10006937m.g Citrus clementina HOM05D007852 ORTHO05D009916 7.1e-10 67.8 77 49.4
AUR62041804 Chenopodium quinoa HOM05D007852 ORTHO05D009916 1.6e-09 66.6 49 55.1
MSTRG.16177 Avicennia marina HOM05D007852 ORTHO05D009916 2.1e-09 66.2 44 61.4
Medtr8g087660 Medicago truncatula HOM05D007852 ORTHO05D009916 2.1e-09 66.2 60 48.3
Actinidia39528 Actinidia chinensis HOM05D007852 ORTHO05D009916 2.7e-09 65.9 80 46.2
Glyma.13G225200 Glycine max HOM05D007852 ORTHO05D009916 3.5e-09 65.5 83 44.6
Psat7g067600 Pisum sativum HOM05D007852 ORTHO05D009916 3.5e-09 65.5 63 49.2
AUR62039495 Chenopodium quinoa HOM05D007852 ORTHO05D009916 4.6e-09 65.1 49 53.1
Ciclev10002903m.g Citrus clementina HOM05D007852 ORTHO05D009916 6.0e-09 64.7 77 46.8
Glyma.08G120000 Glycine max HOM05D007852 ORTHO05D009916 7.8e-09 64.3 45 57.8
TAR626G0530 Trochodendron aralioides HOM05D007852 ORTHO05D009916 1.0e-08 63.9 62 50.0
Sabra04G0041600 Salix brachista HOM05D007852 ORTHO05D009916 1.3e-08 63.5 75 40.0
Lj6g0024251 Lotus japonicus HOM05D007852 ORTHO05D009916 2.3e-08 62.8 46 56.5
BcaB03g12179 Brassica carinata HOM05D007852 ORTHO05D009916 3.0e-08 62.4 46 54.3
Glyma.05G162400 Glycine max HOM05D007852 ORTHO05D009916 3.0e-08 62.4 42 59.5
Phvul.002G242100 Phaseolus vulgaris HOM05D007852 ORTHO05D009916 3.0e-08 62.4 42 59.5
VMungo0540G1707 Vigna mungo HOM05D007852 ORTHO05D009916 3.0e-08 62.4 58 48.3
A07p10220 Brassica napus HOM05D007852 ORTHO05D009916 3.9e-08 62.0 52 48.1
Carub.0001s2803 Capsella rubella HOM05D007852 ORTHO05D009916 3.9e-08 62.0 43 55.8
Phvul.006G171300 Phaseolus vulgaris HOM05D007852 ORTHO05D009916 5.1e-08 61.6 75 41.3
A08p24840 Brassica napus HOM05D007852 ORTHO05D009916 6.6e-08 61.2 46 52.2
BolC3t19875H Brassica oleracea HOM05D007852 ORTHO05D009916 6.6e-08 61.2 46 52.2
BraA08t34439Z Brassica rapa HOM05D007852 ORTHO05D009916 6.6e-08 61.2 46 52.2
Lalb_Chr18g0054901 Lupinus albus HOM05D007852 ORTHO05D009916 6.6e-08 61.2 61 47.5
Ah.14g086910 Amaranthus hybridus HOM05D000275 ORTHO05D009916 8.7e-08 60.8 75 38.7
DCAR_003974 Daucus carota HOM05D007852 ORTHO05D009916 8.7e-08 60.8 62 48.4
Lalb_Chr15g0086451 Lupinus albus HOM05D007852 ORTHO05D009916 8.7e-08 60.8 59 45.8
Sp1g25680 Schrenkiella parvula HOM05D007852 ORTHO05D009916 8.7e-08 60.8 43 53.5
Solyc02g071940.1 Solanum lycopersicum HOM05D007852 ORTHO05D009916 8.7e-08 60.8 62 46.8
BcaC06g35465 Brassica carinata HOM05D007852 ORTHO05D009916 1.1e-07 60.5 43 53.5
C07p15740 Brassica napus HOM05D007852 ORTHO05D009916 1.1e-07 60.5 49 49.0
BolC7t42066H Brassica oleracea HOM05D007852 ORTHO05D009916 1.1e-07 60.5 49 49.0
Hund21452 Selenicereus undatus HOM05D007852 ORTHO05D009916 1.1e-07 60.5 88 35.2
EL10Ac8g19876 Beta vulgaris HOM05D007852 ORTHO05D009916 1.5e-07 60.1 49 49.0
BcaC01g00138 Brassica carinata HOM05D007852 ORTHO05D009916 1.5e-07 60.1 46 52.2
C03p76190 Brassica napus HOM05D007852 ORTHO05D009916 1.5e-07 60.1 46 52.2
Thhalv10009162m.g Eutrema salsugineum HOM05D007852 ORTHO05D009916 1.5e-07 60.1 43 51.2
SGA_v2.0_scaffold1G00101 Striga asiatica HOM05D007852 ORTHO05D009916 1.9e-07 59.7 43 53.5
Nitab4.5_0008572g0040 Nicotiana tabacum HOM05D007852 ORTHO05D009916 3.3e-07 58.9 60 43.3
AL1G43620 Arabidopsis lyrata HOM05D007852 ORTHO05D009916 4.3e-07 58.5 41 53.7
CARHR029160 Cardamine hirsuta HOM05D007852 ORTHO05D009916 4.3e-07 58.5 41 53.7
BraA07t28818Z Brassica rapa HOM05D007852 ORTHO05D009916 5.6e-07 58.2 41 53.7
Lsat_1_v5_gn_4_49360 Lactuca sativa HOM05D007852 ORTHO05D009916 5.6e-07 58.2 42 52.4
Oeu001067.1 Olea europaea HOM05D007852 ORTHO05D009916 5.6e-07 58.2 44 52.3
Sopen02g020930 Solanum pennellii HOM05D007852 ORTHO05D009916 5.6e-07 58.2 62 45.2
Zm00001eb094410 Zea mays HOM05D007852 ORTHO05D009916 5.6e-07 58.2 61 44.3
BcaC05g26993 Brassica carinata HOM05D007852 ORTHO05D009916 7.3e-07 57.8 43 51.2
C05p28530 Brassica napus HOM05D007852 ORTHO05D009916 7.3e-07 57.8 43 51.2
BolC5t31577H Brassica oleracea HOM05D007852 ORTHO05D009916 7.3e-07 57.8 43 51.2
Migut.M00995 Erythranthe guttata HOM05D007852 ORTHO05D009916 7.3e-07 57.8 42 54.8
PGSC0003DMG400028458 Solanum tuberosum HOM05D007852 ORTHO05D009916 9.6e-07 57.4 46 50.0
arahy.Tifrunner.gnm1.ann1.4JXB6U Arachis hypogaea HOM05D007852 ORTHO05D009916 1.6e-06 56.6 77 41.6
Mapoly0042s0091 Marchantia polymorpha HOM05D007852 ORTHO05D009916 4.8e-06 55.1 54 40.7
Sc05g0006790 Simmondsia chinensis HOM05D007852 ORTHO05D009916 4.8e-06 55.1 62 41.9


User provided reference genes

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