Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 0.0e+00 1088.6 540 100.0
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 1.2e-257 892.9 540 80.0
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 4.4e-255 884.4 567 76.5
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 1.6e-241 839.3 542 75.8
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 8.3e-222 773.9 540 68.3
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 7.8e-220 767.3 540 69.6
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 4.0e-216 755.0 540 67.0
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 1.7e-214 749.6 540 66.3
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 9.2e-213 743.8 542 67.7
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 2.7e-212 742.3 540 65.6
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 3.3e-210 735.3 540 66.9
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 7.3e-210 734.2 542 65.7
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 1.4e-208 729.9 540 65.0
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.2e-207 726.9 540 65.0
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.2e-207 726.9 542 65.9
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 2.0e-207 726.1 540 65.0
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 4.4e-207 724.9 540 62.8
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 5.8e-207 724.5 540 64.8
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 3.2e-205 718.8 540 62.2
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 4.6e-204 714.9 543 65.2
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 6.0e-204 714.5 542 65.3
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 1.7e-203 713.0 540 63.3
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 1.1e-202 710.3 541 64.3
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 3.3e-202 708.8 541 64.1
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 8.1e-201 704.1 540 62.8
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 1.8e-200 703.0 544 63.1
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 4.0e-200 701.8 540 62.6
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.2e-199 700.3 540 62.6
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 2.6e-199 699.1 543 63.0
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 5.8e-199 698.0 540 62.4
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 1.7e-198 696.4 540 62.4
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 6.4e-198 694.5 542 61.3
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 1.9e-197 693.0 542 60.7
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 2.7e-196 689.1 541 62.1
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 7.9e-196 687.6 541 61.4
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 1.8e-195 686.4 541 60.6
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 2.3e-195 686.0 542 61.8
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 2.5e-194 682.6 542 58.3
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 9.6e-194 680.6 540 62.0
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 2.1e-193 679.5 541 61.7
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 1.1e-192 677.2 542 59.2
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 3.1e-192 675.6 543 58.6
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 2.0e-191 672.9 540 59.3
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 2.6e-191 672.5 542 58.9
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 2.9e-190 669.1 543 59.1
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 4.9e-190 668.3 543 58.0
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 8.4e-190 667.5 542 58.9
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 1.9e-189 666.4 540 59.8
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 7.1e-189 664.5 543 57.8
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 1.2e-188 663.7 540 59.3
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 3.9e-187 658.7 573 55.8
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 5.1e-187 658.3 542 61.1
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.1e-186 657.1 541 60.1
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 2.5e-186 656.0 541 59.9
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 3.1e-184 649.0 542 57.9
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 1.5e-183 646.7 542 57.7
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 2.6e-183 646.0 564 56.4
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 4.5e-183 645.2 541 57.7
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 1.0e-182 644.0 545 59.1
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 2.1e-180 636.3 542 58.5
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.5e-180 635.6 635 52.9
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 1.0e-179 634.0 470 65.1
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 1.3e-179 633.6 540 56.7
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 3.9e-179 632.1 541 59.0
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 5.1e-179 631.7 541 57.1
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.5e-178 630.2 540 54.8
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 3.3e-178 629.0 542 55.7
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 4.3e-178 628.6 541 58.6
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 1.3e-177 627.1 540 58.1
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 2.8e-177 625.9 540 57.0
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 1.1e-176 624.0 542 57.0
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 9.0e-176 620.9 537 55.3
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 1.5e-175 620.2 542 58.7
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 2.0e-175 619.8 542 56.1
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 2.2e-174 616.3 541 57.7
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 1.4e-173 613.6 429 69.9
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 4.6e-172 608.6 536 56.0
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 4.6e-172 608.6 544 57.4
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 6.1e-172 608.2 548 55.8
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 1.0e-171 607.4 491 60.9
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 1.3e-171 607.1 540 56.1
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 2.3e-171 606.3 548 55.7
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 1.1e-170 604.0 603 53.9
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 1.1e-170 604.0 541 54.7
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 2.2e-169 599.7 536 55.4
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 5.0e-166 588.6 489 59.1
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 4.2e-157 558.9 463 55.7
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 8.0e-156 554.7 471 56.9
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 6.3e-153 545.0 592 49.2
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 7.0e-152 541.6 540 53.7
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 3.2e-149 532.7 447 58.6
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 3.2e-149 532.7 559 52.1
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 1.5e-146 523.9 543 49.7
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 5.3e-144 515.4 553 50.1
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 5.5e-141 505.4 489 54.0
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 4.0e-131 472.6 558 47.1
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 2.0e-130 470.3 555 47.2
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.3e-121 441.0 311 68.5
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 4.1e-120 436.0 400 53.8
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 1.6e-111 407.5 490 43.7
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.2e-90 338.2 558 34.9
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.9e-89 333.6 560 36.4
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 6.0e-79 299.3 578 32.4
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 1.1e-75 288.5 470 36.2
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 2.6e-74 283.9 577 34.8
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 9.9e-74 282.0 223 61.0
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 8.4e-73 278.9 569 34.6
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 8.2e-68 262.3 207 60.9
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 9.4e-56 222.2 182 61.0
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 3.6e-47 193.7 109 81.7
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 1.1e-45 188.7 250 40.8
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 2.8e-36 157.5 197 45.7
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 2.2e-28 131.3 114 51.8
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.4e-27 128.6 76 78.9
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 4.7e-23 113.6 125 46.4
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 5.4e-19 100.1 129 48.1
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 8.6e-17 92.8 59 69.5
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 1.2e-07 62.4 56 53.6
ATR0370G001 Amborella trichopoda HOM05D006698 ORTHO05D008415 3.6e-07 60.8 52 59.6
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 2.3e-06 58.2 97 35.1
Cpa.g.sc14.103 Carica papaya HOM05D006698 ORTHO05D120905 8.9e-06 56.2 50 58.0


User provided reference genes

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