Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 2.3e-160 568.9 306 100.0
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 5.9e-140 501.1 304 89.5
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 3.8e-139 498.4 304 90.1
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 1.2e-132 476.9 307 86.6
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 3.6e-129 465.3 305 82.3
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.4e-128 463.4 306 82.0
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 1.4e-128 463.4 306 82.0
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 3.0e-128 462.2 301 83.7
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 2.0e-127 459.5 304 81.9
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 2.0e-127 459.5 304 80.6
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 7.5e-127 457.6 300 83.0
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 2.8e-126 455.7 306 81.0
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 6.3e-126 454.5 300 82.3
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 2.4e-125 452.6 303 82.5
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 4.5e-124 448.4 302 82.5
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 4.5e-124 448.4 298 80.2
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 3.8e-123 445.3 305 81.0
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 1.5e-122 443.4 305 79.3
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 2.8e-121 439.1 309 79.6
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 3.6e-121 438.7 303 77.9
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 1.0e-120 437.2 290 82.1
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 1.4e-120 436.8 309 79.0
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 1.4e-120 436.8 303 80.5
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 1.5e-119 433.3 312 78.5
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 3.4e-119 432.2 293 79.9
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 9.8e-119 430.6 294 81.3
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 6.4e-118 427.9 299 79.3
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 4.1e-117 425.2 302 78.8
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 9.2e-117 424.1 308 77.6
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 1.6e-116 423.3 293 79.5
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 1.6e-116 423.3 308 76.6
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 2.0e-116 422.9 294 79.6
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 3.5e-116 422.2 311 75.2
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 4.6e-116 421.8 304 78.3
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 4.6e-116 421.8 304 78.3
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 1.7e-115 419.9 308 76.9
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 1.7e-115 419.9 304 78.0
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 3.0e-115 419.1 310 74.8
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 6.6e-115 417.9 314 75.2
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 1.5e-114 416.8 303 75.9
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 2.1e-113 412.9 303 75.9
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 2.1e-113 412.9 294 77.9
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 2.8e-113 412.5 294 77.6
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 2.8e-113 412.5 307 75.9
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 6.2e-113 411.4 296 77.4
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 2.3e-112 409.5 306 75.2
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 6.8e-112 407.9 300 75.0
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 3.4e-111 405.6 306 76.1
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 3.4e-111 405.6 302 75.5
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 4.4e-111 405.2 310 74.8
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 5.8e-111 404.8 306 73.5
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 9.8e-111 404.1 306 75.2
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 1.3e-110 403.7 302 74.2
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 1.7e-110 403.3 304 76.0
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 4.9e-110 401.7 302 74.8
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 6.4e-110 401.4 306 74.8
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 1.1e-109 400.6 288 77.4
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 1.4e-109 400.2 304 75.3
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 4.1e-109 398.7 304 75.0
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 2.7e-108 396.0 300 74.0
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 1.3e-107 393.7 296 75.0
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 1.1e-106 390.6 305 72.5
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 3.3e-106 389.0 294 73.5
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 6.2e-105 384.8 282 77.7
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 1.8e-104 383.3 255 81.6
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 1.8e-104 383.3 297 71.0
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 1.2e-103 380.6 289 72.3
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 1.3e-102 377.1 296 74.0
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 3.5e-100 369.0 295 68.5
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 1.9e-98 363.2 304 67.8
AUR62030238 Chenopodium quinoa HOM05D007650 ORTHO05D009695 5.6e-98 361.7 307 68.1
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 7.3e-98 361.3 261 75.1
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 4.7e-97 358.6 247 76.9
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 1.8e-96 356.7 286 69.2
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 9.0e-88 327.8 249 71.5
AUR62027602 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.7e-86 323.6 307 63.2
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 1.1e-85 320.9 260 65.0
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 5.6e-82 308.5 236 71.2
Sed0021228 Sechium edule HOM05D007650 ORTHO05D009695 1.3e-78 297.4 221 74.7
Pp3c2_34550 Physcomitrium patens HOM05D007650 ORTHO05D009695 3.5e-68 262.7 204 69.6
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 8.7e-67 258.1 174 80.5
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 9.0e-64 248.1 165 81.8
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 3.2e-61 239.6 234 60.3
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 1.0e-59 234.6 192 74.0
CBR_g31268 Chara braunii HOM05D007650 ORTHO05D009695 1.1e-58 231.1 243 54.7
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 5.9e-55 218.8 149 83.2
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 5.0e-54 215.7 142 84.5
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 1.9e-53 213.8 297 51.2
Manes.15G119900 Manihot esculenta HOM05D007650 ORTHO05D009695 3.9e-43 179.5 175 62.3
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 7.7e-39 165.2 118 78.8
HanXRQChr09g0241981 Helianthus annuus HOM05D007650 ORTHO05D009695 1.1e-32 144.8 97 78.4
CAN.G637.51 Capsicum annuum HOM05D007650 ORTHO05D009695 1.8e-24 117.5 119 59.7
CAN.G84.7 Capsicum annuum HOM05D007650 ORTHO05D009695 2.7e-20 103.6 130 53.8
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 1.8e-16 90.9 60 80.0
Zm00001eb089160 Zea mays HOM05D000666 ORTHO05D001431 1.2e-10 71.6 47 74.5


User provided reference genes

Program Settings