Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 2.4e-75 285.4 144 100.0
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 3.4e-37 158.7 144 56.9
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 8.6e-33 144.1 140 51.4
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 3.3e-32 142.1 147 52.4
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 4.3e-32 141.7 137 49.6
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 1.6e-31 139.8 140 52.1
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 1.1e-30 137.1 135 52.6
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 1.8e-30 136.3 142 52.8
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 5.2e-30 134.8 134 47.8
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 5.2e-30 134.8 138 47.8
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 1.3e-28 130.2 143 46.9
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 6.4e-28 127.9 133 52.6
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 8.4e-28 127.5 139 48.9
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 1.1e-27 127.1 125 53.6
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 1.1e-27 127.1 136 50.7
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 2.4e-27 125.9 137 47.4
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 3.2e-27 125.6 133 49.6
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 4.1e-27 125.2 135 48.9
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 1.6e-26 123.2 130 43.1
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 1.6e-26 123.2 130 46.9
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 2.7e-26 122.5 134 47.0
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 1.0e-25 120.6 136 48.5
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 2.3e-25 119.4 137 43.1
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 3.9e-25 118.6 135 48.1
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 3.9e-25 118.6 135 47.4
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 5.1e-25 118.2 133 50.4
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 1.1e-24 117.1 137 42.3
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 1.1e-24 117.1 131 43.5
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 1.1e-24 117.1 141 46.1
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 1.5e-24 116.7 130 46.2
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 1.9e-24 116.3 130 46.2
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 3.3e-24 115.5 149 46.3
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 4.3e-24 115.2 130 45.4
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 5.6e-24 114.8 137 44.5
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 9.6e-24 114.0 138 42.0
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 1.2e-23 113.6 143 45.5
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 1.6e-23 113.2 130 46.9
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 4.7e-23 111.7 131 46.6
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 8.1e-23 110.9 133 42.9
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 8.1e-23 110.9 131 42.7
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 1.1e-22 110.5 138 43.5
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 2.4e-22 109.4 141 43.3
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 3.1e-22 109.0 139 43.2
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 9.9e-21 104.0 143 42.0
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 1.3e-20 103.6 132 42.4
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 1.3e-20 103.6 138 43.5
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 1.7e-20 103.2 138 44.2
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 2.2e-20 102.8 145 46.2
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 2.2e-20 102.8 138 42.0
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 2.9e-20 102.4 143 42.7
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 8.4e-20 100.9 130 40.8
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 8.4e-20 100.9 91 53.8
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 1.1e-19 100.5 134 43.3
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 4.2e-19 98.6 138 42.0
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 6.0e-18 94.7 144 41.7
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 6.0e-18 94.7 100 45.0
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 1.3e-17 93.6 144 41.0
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 1.3e-17 93.6 133 42.9
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 3.0e-17 92.4 137 42.3
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 3.0e-17 92.4 137 42.3
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 3.9e-17 92.0 137 43.1
Haze_05600 Corylus avellana HOM05D007839 ORTHO05D009924 5.1e-17 91.7 139 39.6
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 6.6e-17 91.3 71 67.6
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 1.1e-16 90.5 134 42.5
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 5.6e-16 88.2 130 40.0
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 9.6e-16 87.4 94 51.1
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 4.8e-15 85.1 72 61.1
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 1.1e-14 84.0 72 59.7
Gohir.D06G204450 Gossypium hirsutum HOM05D007839 ORTHO05D009924 1.1e-14 84.0 132 38.6
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 5.3e-14 81.6 132 37.9
Glyma.15G094000 Glycine max HOM05D007839 ORTHO05D009924 3.4e-13 79.0 129 41.1
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 3.4e-13 79.0 71 59.2
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 1.7e-12 76.6 84 53.6
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 2.2e-12 76.3 71 57.7
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 1.1e-11 73.9 156 35.9
Ciclev10016244m.g Citrus clementina HOM05D008587 ORTHO05D010485 1.1e-11 73.9 88 42.0
Potri.004G064900 Populus trichocarpa HOM05D008587 ORTHO05D010485 5.4e-11 71.6 89 42.7
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 1.6e-10 70.1 73 50.7
Atru.chr10.1227 Acer truncatum HOM05D008587 ORTHO05D010485 2.1e-10 69.7 88 44.3
Manes.17G070000 Manihot esculenta HOM05D008587 ORTHO05D010485 4.6e-10 68.6 88 38.6
QL05p058141 Quercus lobata HOM05D008587 ORTHO05D010485 2.3e-09 66.2 86 39.5
CANSAT35G1906 Cannabis sativa HOM05D007839 ORTHO05D009924 3.0e-09 65.9 112 34.8
CANSAT35G0336 Cannabis sativa HOM05D007839 ORTHO05D009924 1.1e-08 63.9 141 32.6
QL05p058191 Quercus lobata HOM05D008587 ORTHO05D010485 1.5e-08 63.5 101 35.6
Thhalv10017034m.g Eutrema salsugineum HOM05D008587 ORTHO05D010485 1.9e-08 63.2 91 36.3
AL4G30510 Arabidopsis lyrata HOM05D008587 ORTHO05D010485 2.5e-08 62.8 90 36.7
AT2G34540 Arabidopsis thaliana HOM05D008587 ORTHO05D010485 2.5e-08 62.8 90 36.7
Cpa.g.sc166.5 Carica papaya HOM05D008587 ORTHO05D010485 3.3e-08 62.4 90 34.4
Sp4g16800 Schrenkiella parvula HOM05D008587 ORTHO05D010485 3.3e-08 62.4 90 36.7
Carub.0004s1621 Capsella rubella HOM05D008587 ORTHO05D010485 5.6e-08 61.6 90 35.6
THA.LOC104814298 Tarenaya hassleriana HOM05D008587 ORTHO05D010485 5.6e-08 61.6 90 36.7
Cfa000946 Carpinus fangiana HOM05D008587 ORTHO05D010485 7.4e-08 61.2 96 35.4
CANSAT35G0142 Cannabis sativa HOM05D008587 ORTHO05D010485 9.6e-08 60.8 90 36.7
Aa31LG10G6860 Aethionema arabicum HOM05D008587 ORTHO05D010485 2.1e-07 59.7 90 35.6
Sabra04G0043200 Salix brachista HOM05D008587 ORTHO05D010485 2.1e-07 59.7 89 36.0
BcaB02g09532 Brassica carinata HOM05D008587 ORTHO05D010485 2.8e-07 59.3 90 35.6
TWI73G0910 Tripterygium wilfordii HOM05D008587 ORTHO05D010485 3.7e-07 58.9 93 30.1
BcaC02g11516 Brassica carinata HOM05D008587 ORTHO05D010485 6.2e-07 58.2 90 35.6
C04p14490 Brassica napus HOM05D008587 ORTHO05D010485 6.2e-07 58.2 90 35.6
BolC4t23032H Brassica oleracea HOM05D008587 ORTHO05D010485 6.2e-07 58.2 90 35.6
CARHR128630 Cardamine hirsuta HOM05D008587 ORTHO05D010485 6.2e-07 58.2 90 35.6
FAN11G1722 Fragaria x ananassa HOM05D014465 ORTHO05D010485 8.1e-07 57.8 89 36.0
A05p11130 Brassica napus HOM05D008587 ORTHO05D010485 1.1e-06 57.4 90 35.6
BraA05t20060Z Brassica rapa HOM05D008587 ORTHO05D010485 1.1e-06 57.4 90 35.6
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 1.1e-06 57.4 43 67.4
QL05p058149 Quercus lobata HOM05D008587 ORTHO05D010485 1.1e-06 57.4 90 33.3
Cfa000945 Carpinus fangiana HOM05D008587 ORTHO05D010485 1.8e-06 56.6 91 31.9
FAN16G1026 Fragaria x ananassa HOM05D014465 ORTHO05D010485 2.4e-06 56.2 89 37.1
FvH4_3g05550 Fragaria vesca HOM05D014465 ORTHO05D010485 3.1e-06 55.8 89 34.8
FAN16G1258 Fragaria x ananassa HOM05D014465 ORTHO05D010485 5.3e-06 55.1 89 34.8
Prupe.4G080600 Prunus persica HOM05D008587 ORTHO05D010485 9.0e-06 54.3 89 33.7


User provided reference genes

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