Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 8.2e-140 500.4 249 100.0
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 2.1e-95 352.8 249 68.7
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 1.3e-92 343.6 246 67.9
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 4.6e-90 335.1 251 64.5
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 1.5e-85 320.1 247 64.0
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 9.9e-85 317.4 247 63.6
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 2.9e-84 315.8 249 60.2
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 2.9e-84 315.8 252 63.5
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 1.1e-83 313.9 242 64.9
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 1.9e-83 313.2 250 61.2
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 2.4e-83 312.8 241 64.3
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 6.0e-82 308.1 250 60.0
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 1.3e-81 307.0 244 61.9
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 2.5e-80 302.8 246 63.8
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 2.8e-79 299.3 250 61.2
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 2.8e-79 299.3 249 58.2
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 4.7e-79 298.5 251 58.2
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 1.4e-78 297.0 250 58.8
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 1.4e-78 297.0 251 60.2
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 1.4e-78 297.0 251 57.4
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 2.4e-78 296.2 229 65.1
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 3.1e-78 295.8 226 62.8
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 4.0e-78 295.4 252 59.5
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 8.9e-78 294.3 229 65.1
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 8.9e-78 294.3 252 59.9
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.2e-77 293.9 252 59.9
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 2.6e-77 292.7 239 59.4
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.6e-77 292.7 252 59.5
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 2.6e-77 292.7 224 62.9
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.4e-77 292.4 252 59.5
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 9.9e-77 290.8 249 58.2
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 2.9e-76 289.3 236 58.9
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 4.9e-76 288.5 235 57.4
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 6.4e-76 288.1 250 56.0
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 8.4e-76 287.7 244 58.2
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 1.1e-75 287.3 248 57.3
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 1.9e-75 286.6 225 64.0
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 1.2e-74 283.9 252 56.7
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 2.1e-74 283.1 250 54.8
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 2.7e-74 282.7 244 57.4
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 3.9e-73 278.9 248 58.5
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 5.6e-72 275.0 249 55.4
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 9.6e-72 274.2 217 61.3
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 1.2e-71 273.9 249 55.0
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.6e-71 273.5 217 60.8
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 2.8e-71 272.7 239 55.6
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 8.1e-71 271.2 219 58.9
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 8.1e-71 271.2 221 58.8
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 1.8e-70 270.0 225 59.1
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 6.9e-70 268.1 251 53.4
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 9.0e-70 267.7 212 60.8
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 2.0e-69 266.5 221 60.2
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 3.4e-69 265.8 209 59.8
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 2.9e-68 262.7 226 57.1
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 8.4e-68 261.2 239 52.7
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.1e-67 260.8 244 52.0
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 1.1e-67 260.8 218 59.6
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.4e-67 260.4 236 52.5
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 7.1e-67 258.1 243 53.5
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 9.3e-67 257.7 251 53.4
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.6e-66 256.9 249 50.6
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 2.1e-66 256.5 251 53.0
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 1.3e-63 247.3 244 52.0
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 1.1e-59 234.2 239 49.4
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 3.2e-59 232.6 244 50.0
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 4.2e-59 232.3 249 49.4
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 4.6e-58 228.8 203 57.6
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 7.9e-58 228.0 236 46.6
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 1.0e-57 227.6 236 48.3
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 1.0e-57 227.6 245 51.0
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 6.7e-57 224.9 240 50.0
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 8.7e-57 224.6 235 51.1
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 9.6e-56 221.1 185 63.8
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.6e-55 220.3 239 45.2
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.4e-54 217.2 197 55.8
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 4.9e-52 208.8 229 45.9
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 5.5e-51 205.3 213 50.7
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 7.9e-50 201.4 160 62.5
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 8.7e-49 198.0 220 45.9
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 7.4e-48 194.9 226 42.9
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 2.4e-46 189.9 224 41.5
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 2.4e-46 189.9 241 44.4
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 2.4e-46 189.9 189 50.8
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 6.3e-39 165.2 154 53.2
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 3.4e-37 159.5 147 53.1
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 1.4e-30 137.5 168 45.8
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 1.0e-25 121.3 102 59.8
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 7.4e-24 115.2 80 65.0
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 3.4e-21 106.3 94 48.9
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 1.6e-13 80.9 171 27.5


User provided reference genes

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