Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G113200 Carya illinoinensis HOM05D007436 ORTHO05D009398 1.4e-134 483.0 255 100.0
Haze_07065 Corylus avellana HOM05D007436 ORTHO05D009398 1.5e-83 313.5 236 71.2
TAR627G0530 Trochodendron aralioides HOM05D007436 ORTHO05D009398 2.6e-72 276.2 226 65.5
GSVIVG01002756001 Vitis vinifera HOM05D007436 ORTHO05D009398 4.4e-72 275.4 231 66.7
Prupe.4G000400 Prunus persica HOM05D007436 ORTHO05D009398 7.5e-72 274.6 210 68.6
Dinv04377 Davidia involucrata HOM05D007436 ORTHO05D009398 1.3e-71 273.9 223 67.3
Ciclev10016151m.g Citrus clementina HOM05D007436 ORTHO05D009398 6.3e-71 271.6 209 68.9
QL05p066185 Quercus lobata HOM05D007436 ORTHO05D009398 8.3e-71 271.2 220 67.3
TWI38G0239 Tripterygium wilfordii HOM05D007436 ORTHO05D009398 8.3e-71 271.2 191 73.3
Rhsim13G0138000 Rhododendron simsii HOM05D007436 ORTHO05D009398 1.4e-70 270.4 217 66.8
FvH4_3g00011 Fragaria vesca HOM05D007436 ORTHO05D009398 2.4e-70 269.6 181 72.4
RcHm_v2.0_Chr5g0000011 Rosa chinensis HOM05D007436 ORTHO05D009398 2.4e-70 269.6 181 74.0
Oeu016929.1 Olea europaea HOM05D007436 ORTHO05D009398 3.2e-70 269.2 180 75.6
MBI14_g12730_MAGBIO Magnolia biondii HOM05D007436 ORTHO05D009398 5.4e-70 268.5 195 69.7
Actinidia01458 Actinidia chinensis HOM05D007436 ORTHO05D009398 7.0e-70 268.1 195 72.8
MD10G1342400 Malus domestica HOM05D007436 ORTHO05D009398 1.2e-69 267.3 207 69.1
MSTRG.14579 Avicennia marina HOM05D007436 ORTHO05D009398 5.9e-69 265.0 185 72.4
COL.COLO4_31969 Corchorus olitorius HOM05D007436 ORTHO05D009398 5.9e-69 265.0 158 79.1
Thecc.06G244700 Theobroma cacao HOM05D007436 ORTHO05D009398 5.9e-69 265.0 157 81.5
Nitab4.5_0000147g0110 Nicotiana tabacum HOM05D007436 ORTHO05D009398 1.0e-68 264.2 216 63.4
FAN21G3717 Fragaria x ananassa HOM05D007436 ORTHO05D009398 1.3e-68 263.8 181 71.3
Medtr2g028000 Medicago truncatula HOM05D007436 ORTHO05D009398 2.9e-68 262.7 155 80.0
Nitab4.5_0001663g0200 Nicotiana tabacum HOM05D007436 ORTHO05D009398 3.9e-68 262.3 216 63.4
Hma1.2p1_0394F.1_g143390 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 1.1e-67 260.8 187 70.6
Lalb_Chr15g0088471 Lupinus albus HOM05D007436 ORTHO05D009398 1.1e-67 260.8 154 80.5
Gohir.D05G180600 Gossypium hirsutum HOM05D007436 ORTHO05D009398 1.5e-67 260.4 156 79.5
Gorai.009G185600 Gossypium raimondii HOM05D007436 ORTHO05D009398 1.5e-67 260.4 156 79.5
Aqoxy5G00546 Aquilegia oxysepala HOM05D007436 ORTHO05D009398 2.5e-67 259.6 155 81.9
Ca_24687_v3 Cicer arietinum L. HOM05D007436 ORTHO05D009398 2.5e-67 259.6 196 66.3
Glyma.09G017600 Glycine max HOM05D007436 ORTHO05D009398 2.5e-67 259.6 187 69.0
Migut.H01642 Erythranthe guttata HOM05D007436 ORTHO05D009398 3.3e-67 259.2 194 70.1
Sabra06G0000900 Salix brachista HOM05D002163 ORTHO05D002386 3.3e-67 259.2 163 78.5
Glyma.15G123400 Glycine max HOM05D007436 ORTHO05D009398 4.3e-67 258.8 191 68.6
Potri.016G000900 Populus trichocarpa HOM05D007436 ORTHO05D009398 7.3e-67 258.1 158 78.5
Cpa.g.sc27.183 Carica papaya HOM05D007436 ORTHO05D009398 9.5e-67 257.7 191 69.1
PGR004G2900 Punica granatum HOM05D007436 ORTHO05D009398 9.5e-67 257.7 203 65.5
Psat1g171240 Pisum sativum HOM05D007436 ORTHO05D009398 2.8e-66 256.1 158 76.6
Lj6g0025098 Lotus japonicus HOM05D007436 ORTHO05D009398 3.6e-66 255.8 187 67.9
Phvul.006G134500 Phaseolus vulgaris HOM05D007436 ORTHO05D009398 3.6e-66 255.8 195 66.7
Potri.006G000600 Populus trichocarpa HOM05D007436 ORTHO05D009398 3.6e-66 255.8 158 77.2
ECA247G4131 Erigeron canadensis HOM05D007436 ORTHO05D009398 4.7e-66 255.4 152 79.6
VMungo0540G0488 Vigna mungo HOM05D007436 ORTHO05D009398 1.0e-65 254.2 195 65.6
Solyc04g015330.3 Solanum lycopersicum HOM05D007436 ORTHO05D009398 1.8e-65 253.4 160 77.5
PGSC0003DMG400027262 Solanum tuberosum HOM05D007436 ORTHO05D009398 1.8e-65 253.4 160 76.9
TPR.G10477 Trifolium pratense HOM05D007436 ORTHO05D009398 1.8e-65 253.4 155 79.4
EL10Ac6g14103 Beta vulgaris HOM05D007436 ORTHO05D009398 5.2e-65 251.9 226 58.8
Lsat_1_v5_gn_7_12720 Lactuca sativa HOM05D007436 ORTHO05D009398 8.9e-65 251.1 153 77.1
Sopen04g007390 Solanum pennellii HOM05D007436 ORTHO05D009398 1.2e-64 250.8 160 76.9
ATR0751G013 Amborella trichopoda HOM05D007436 ORTHO05D009398 1.5e-64 250.4 157 73.2
CAN.G1905.6 Capsicum annuum HOM05D007436 ORTHO05D009398 1.5e-64 250.4 184 68.5
CsaV3_6G047980 Cucumis sativus L. HOM05D007436 ORTHO05D009398 1.5e-64 250.4 183 67.2
HanXRQChr05g0129051 Helianthus annuus HOM05D007436 ORTHO05D009398 2.0e-64 250.0 152 77.0
Cc09_g00050 Coffea canephora HOM05D007436 ORTHO05D009398 4.4e-64 248.8 193 66.3
Ah.02g128250 Amaranthus hybridus HOM05D007436 ORTHO05D009398 7.5e-64 248.1 159 73.0
vmacro03584 Vaccinium macrocarpon HOM05D007436 ORTHO05D009398 2.9e-63 246.1 193 67.9
Sed0017957 Sechium edule HOM05D007436 ORTHO05D009398 6.4e-63 245.0 202 60.9
arahy.Tifrunner.gnm1.ann1.61UQ0U Arachis hypogaea HOM05D007436 ORTHO05D009398 8.3e-63 244.6 246 56.5
ClCG01G021000 Citrullus lanatus HOM05D007436 ORTHO05D009398 8.3e-63 244.6 202 62.9
Hund25779 Selenicereus undatus HOM05D007436 ORTHO05D009398 8.3e-63 244.6 178 69.1
DCAR_015316 Daucus carota HOM05D007436 ORTHO05D009398 1.9e-62 243.4 155 76.1
AUR62002774 Chenopodium quinoa HOM05D007436 ORTHO05D009398 5.4e-62 241.9 160 72.5
AUR62028431 Chenopodium quinoa HOM05D007436 ORTHO05D009398 2.7e-61 239.6 160 70.6
Atru.chr1.2207 Acer truncatum HOM05D002163 ORTHO05D002386 3.5e-61 239.2 202 65.8
CDE06G2435 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 4.6e-61 238.8 192 61.5
Nn3g16606 Nelumbo nucifera HOM05D007436 ORTHO05D009398 1.0e-60 237.7 139 81.3
Sc24g0002050 Simmondsia chinensis HOM05D007436 ORTHO05D009398 1.0e-60 237.7 231 54.5
CDE03G0161 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 1.7e-60 236.9 152 72.4
Thhalv10010705m.g Eutrema salsugineum HOM05D007436 ORTHO05D009398 1.7e-60 236.9 161 70.8
AT3G52155 Arabidopsis thaliana HOM05D007436 ORTHO05D009398 2.3e-60 236.5 162 70.4
Sp5g10120 Schrenkiella parvula HOM05D007436 ORTHO05D009398 6.6e-60 235.0 161 70.2
AL5G32730 Arabidopsis lyrata HOM05D007436 ORTHO05D009398 1.9e-59 233.4 161 70.8
Peaxi162Scf00563g00525 Petunia axillaris HOM05D007436 ORTHO05D009398 3.3e-59 232.6 140 80.0
HPP92_000124 Vanilla planifolia HOM05D007436 ORTHO05D009398 5.6e-59 231.9 155 71.0
Carub.0005s1851 Capsella rubella HOM05D007436 ORTHO05D009398 7.3e-59 231.5 161 69.6
Zm00001eb097480 Zea mays HOM05D007436 ORTHO05D009398 9.5e-59 231.1 176 68.8
CARHR161900 Cardamine hirsuta HOM05D007436 ORTHO05D009398 2.8e-58 229.6 161 68.9
Aa31LG10G7250 Aethionema arabicum HOM05D007436 ORTHO05D009398 1.1e-57 227.6 156 69.9
BcaC06g33383 Brassica carinata HOM05D007436 ORTHO05D009398 1.1e-57 227.6 161 67.1
C07p46820 Brassica napus HOM05D007436 ORTHO05D009398 1.1e-57 227.6 161 67.1
BolC7t45199H Brassica oleracea HOM05D007436 ORTHO05D009398 1.1e-57 227.6 161 67.1
A03p48730 Brassica napus HOM05D007436 ORTHO05D009398 2.3e-57 226.5 161 67.1
THA.LOC104813862 Tarenaya hassleriana HOM05D007436 ORTHO05D009398 2.3e-57 226.5 162 66.7
BraA03t13973Z Brassica rapa HOM05D007436 ORTHO05D009398 4.0e-57 225.7 161 66.5
Zm00001eb309010 Zea mays HOM05D007436 ORTHO05D009398 4.0e-57 225.7 177 65.5
Os09g0287300 Oryza sativa ssp. japonica HOM05D007436 ORTHO05D009398 2.0e-56 223.4 203 59.6
Mapoly0056s0036 Marchantia polymorpha HOM05D007436 ORTHO05D009398 7.8e-53 211.5 153 65.4
Pp3c4_8570 Physcomitrium patens HOM05D007436 ORTHO05D009398 5.2e-49 198.7 156 60.9
SMO358G0652 Selaginella moellendorffii HOM05D007436 ORTHO05D009398 3.2e-46 189.5 155 54.2
Lj1A1250G60 Lonicera japonica HOM05D007436 ORTHO05D009398 9.2e-46 188.0 116 79.3
Hma1.2p1_0394F.1_g143400 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 2.1e-45 186.8 145 66.9
Manes.09G072800 Manihot esculenta HOM05D007436 ORTHO05D009398 7.8e-45 184.9 145 69.0
CBR_g31519 Chara braunii HOM05D007436 ORTHO05D009398 1.0e-44 184.5 159 58.5
AagrBONN_evm.TU.Sc2ySwM_228.5510 Anthoceros agrestis HOM05D007436 ORTHO05D009398 2.3e-44 183.3 152 57.9
Sabra16G0007700 Salix brachista HOM05D002163 ORTHO05D002386 1.5e-43 180.6 116 76.7
Gohir.A05G177200 Gossypium hirsutum HOM05D007436 ORTHO05D009398 1.9e-43 180.3 117 73.5
MELO3C007986.2 Cucumis melo HOM05D007436 ORTHO05D009398 1.1e-41 174.5 156 60.3
Eucgr.D00973 Eucalyptus grandis HOM05D007436 ORTHO05D009398 1.7e-31 140.6 187 45.5
MCO14G290 Micromonas commoda HOM05D007436 ORTHO05D009398 8.7e-28 128.3 218 37.6
SGA_v2.0_scaffold49G18215 Striga asiatica HOM05D007436 ORTHO05D009398 3.3e-27 126.3 203 39.9
Cre10.g431850 Chlamydomonas reinhardtii HOM05D007436 ORTHO05D009398 7.3e-27 125.2 138 42.0
SEGI_34845 Sequoiadendron giganteum HOM05D007436 ORTHO05D009398 1.4e-22 110.9 64 76.6
PRCOL_00004330 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 5.1e-20 102.4 142 37.3
PRCOL_00006376 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 4.8e-18 95.9 163 35.0
Lj1A1250G59 Lonicera japonica HOM05D007436 ORTHO05D009398 3.5e-13 79.7 39 87.2


User provided reference genes

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