Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G112600 Carya illinoinensis HOM05D008403 ORTHO05D010317 8.3e-94 347.1 179 100.0
QL05p066293 Quercus lobata HOM05D008403 ORTHO05D010317 8.2e-41 171.0 185 56.8
QL05p066264 Quercus lobata HOM05D008403 ORTHO05D010317 9.1e-40 167.5 180 55.6
COL.COLO4_27522 Corchorus olitorius HOM05D008403 ORTHO05D010317 3.6e-36 155.6 179 51.4
CiPaw.08G030100 Carya illinoinensis HOM05D008403 ORTHO05D010317 1.4e-35 153.7 169 52.1
RcHm_v2.0_Chr5g0000141 Rosa chinensis HOM05D008403 ORTHO05D010317 2.0e-34 149.8 179 50.3
Duzib268G1784 Durio zibethinus HOM05D008403 ORTHO05D010317 5.7e-34 148.3 169 50.9
TWI31G1421 Tripterygium wilfordii HOM05D008403 ORTHO05D010317 9.7e-34 147.5 171 50.9
CANSAT56G1928 Cannabis sativa HOM05D008403 ORTHO05D010317 1.8e-32 143.3 158 52.5
Prupe.4G001200 Prunus persica HOM05D008403 ORTHO05D010317 2.4e-32 142.9 179 50.8
FvH4_3g00110 Fragaria vesca HOM05D008403 ORTHO05D010317 5.3e-32 141.7 178 48.3
Cpa.g.sc27.190 Carica papaya HOM05D008403 ORTHO05D010317 7.0e-32 141.4 167 49.1
Lj6g0020324 Lotus japonicus HOM05D008403 ORTHO05D010317 9.1e-32 141.0 177 47.5
Aqoxy4G02379 Aquilegia oxysepala HOM05D008403 ORTHO05D010317 6.5e-30 134.8 173 45.1
FAN25G0691 Fragaria x ananassa HOM05D000186 ORTHO05D001124 1.9e-29 133.3 179 44.7
Manes.08G015200 Manihot esculenta HOM05D008403 ORTHO05D010317 5.5e-29 131.7 169 48.5
Potri.016G001600 Populus trichocarpa HOM05D008403 ORTHO05D010317 5.5e-29 131.7 174 46.6
Rhsim02G0087900 Rhododendron simsii HOM05D008403 ORTHO05D010317 5.5e-29 131.7 160 47.5
Atru.chr2.423 Acer truncatum HOM05D008403 ORTHO05D010317 2.7e-28 129.4 175 43.4
Potri.008G013400 Populus trichocarpa HOM05D008403 ORTHO05D010317 1.0e-27 127.5 168 44.6
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 1.4e-27 127.1 176 42.6
Sabra08G0008100 Salix brachista HOM05D008403 ORTHO05D010317 2.3e-27 126.3 169 45.0
Atru.chr1.2232 Acer truncatum HOM05D008403 ORTHO05D010317 7.4e-26 121.3 171 43.3
Atru.chr2.427 Acer truncatum HOM05D008403 ORTHO05D010317 1.3e-25 120.6 175 40.0
Lalb_Chr20g0119681 Lupinus albus HOM05D008403 ORTHO05D010317 4.8e-25 118.6 169 43.8
PGR004G1348 Punica granatum HOM05D008403 ORTHO05D010317 6.3e-25 118.2 160 43.8
Eucgr.D00968 Eucalyptus grandis HOM05D008403 ORTHO05D010317 1.6e-23 113.6 176 43.2
Atru.chr2.1377 Acer truncatum HOM05D008403 ORTHO05D010317 1.5e-21 107.1 174 39.7
Ciclev10017450m.g Citrus clementina HOM05D008403 ORTHO05D010317 4.2e-21 105.5 160 41.9
Actinidia04549 Actinidia chinensis HOM05D008403 ORTHO05D010317 1.6e-20 103.6 116 50.0
Oeu016936.1 Olea europaea HOM05D008403 ORTHO05D010317 1.6e-20 103.6 178 37.6
PGR004G1501 Punica granatum HOM05D008403 ORTHO05D010317 1.8e-19 100.1 181 40.3
PSO675G4416 Papaver somniferum HOM05D008403 ORTHO05D010317 3.4e-18 95.9 185 40.0
PSO732G0094 Papaver somniferum HOM05D008403 ORTHO05D010317 9.8e-18 94.4 170 38.8
Thecc.06G243800 Theobroma cacao HOM05D014554 ORTHO05D010317 2.4e-16 89.7 172 38.4
Rhsim02G0088000 Rhododendron simsii HOM05D008403 ORTHO05D010317 3.1e-16 89.4 177 36.2
PSO732G0610 Papaver somniferum HOM05D008403 ORTHO05D010317 1.2e-15 87.4 149 37.6
PSO541G3674 Papaver somniferum HOM05D008403 ORTHO05D010317 1.6e-15 87.0 160 40.6
Lalb_Chr15g0088411 Lupinus albus HOM05D008403 ORTHO05D010317 2.0e-15 86.7 79 55.7
SGA_v2.0_scaffold186G40151 Striga asiatica HOM05D008403 ORTHO05D010317 4.5e-15 85.5 175 34.3
PSO732G0092 Papaver somniferum HOM05D008403 ORTHO05D010317 5.9e-15 85.1 170 35.3
Thecc.05G027500 Theobroma cacao HOM05D014554 ORTHO05D036092 2.2e-14 83.2 173 37.6
PSO732G0597 Papaver somniferum HOM05D008403 ORTHO05D010317 2.9e-14 82.8 155 37.4
PSO675G0961 Papaver somniferum HOM05D008403 ORTHO05D010317 5.0e-14 82.0 167 35.3
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 3.2e-13 79.3 147 34.7
Gohir.A06G202800 Gossypium hirsutum HOM05D014554 ORTHO05D010317 9.4e-13 77.8 175 37.1
Gorai.010G247400 Gossypium raimondii HOM05D014554 ORTHO05D010317 3.6e-12 75.9 175 36.6
SGA_v2.0_scaffold7G03659 Striga asiatica HOM05D008403 ORTHO05D010317 6.1e-12 75.1 183 32.2
Gohir.D06G218900 Gossypium hirsutum HOM05D014554 ORTHO05D010317 8.0e-12 74.7 175 36.6
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 8.0e-12 74.7 143 32.2
Thecc.02G296800 Theobroma cacao HOM05D008403 ORTHO05D010317 8.0e-12 74.7 84 52.4
Oeu017922.1 Olea europaea HOM05D008403 ORTHO05D010317 1.0e-11 74.3 135 33.3
TAR627G0557 Trochodendron aralioides HOM05D008403 ORTHO05D010317 1.0e-11 74.3 175 33.7
Migut.F01664 Erythranthe guttata HOM05D008403 ORTHO05D010317 1.4e-11 73.9 163 33.1
PSO732G0418 Papaver somniferum HOM05D008403 ORTHO05D010317 2.3e-11 73.2 175 33.1
Migut.M01476 Erythranthe guttata HOM05D008403 ORTHO05D010317 6.8e-11 71.6 182 31.3
TAR627G0317 Trochodendron aralioides HOM05D008403 ORTHO05D010317 2.0e-10 70.1 173 32.9
Oeu002789.2 Olea europaea HOM05D008403 ORTHO05D010317 4.4e-10 68.9 148 29.1
PSO017G6871 Papaver somniferum HOM05D001445 ORTHO05D001261 9.8e-10 67.8 182 30.2
COL.COLO4_14675 Corchorus olitorius HOM05D014554 ORTHO05D010317 2.2e-09 66.6 150 32.7
Lj6g0019770 Lotus japonicus HOM05D000001 ORTHO05D010775 3.7e-09 65.9 84 44.0
PGR004G2081 Punica granatum HOM05D003146 ORTHO05D001819 1.4e-08 63.9 175 29.1
MBI11_g10522_MAGBIO Magnolia biondii HOM05D020019 ORTHO05D003404 2.4e-08 63.2 177 29.4
TAR636G1790 Trochodendron aralioides HOM05D004113 ORTHO05D005233 2.4e-08 63.2 147 30.6
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 4.1e-08 62.4 155 29.0
Nn1g00650 Nelumbo nucifera HOM05D001445 ORTHO05D001261 1.2e-07 60.8 134 30.6
TAR636G0184 Trochodendron aralioides HOM05D004113 ORTHO05D005233 1.2e-07 60.8 180 27.8
Ciclev10003770m.g Citrus clementina HOM05D004894 ORTHO05D005689 1.6e-07 60.5 132 34.8
Sabra01G0098200 Salix brachista HOM05D003556 ORTHO05D003404 1.6e-07 60.5 178 29.2
CiPaw.01G135600 Carya illinoinensis HOM05D001578 ORTHO05D001207 2.7e-07 59.7 161 28.0
MD03G1290800 Malus domestica HOM05D003556 ORTHO05D003404 2.7e-07 59.7 145 29.7
ClCG10G011070 Citrullus lanatus HOM05D003556 ORTHO05D003404 4.5e-07 58.9 147 29.9
CiPaw.01G135900 Carya illinoinensis HOM05D001578 ORTHO05D001207 5.9e-07 58.5 180 28.3
MD13G1150400 Malus domestica HOM05D001578 ORTHO05D001207 5.9e-07 58.5 177 28.8
Manes.03G207000 Manihot esculenta HOM05D001578 ORTHO05D001207 5.9e-07 58.5 176 29.0
MD13G1150200 Malus domestica HOM05D001578 ORTHO05D001207 7.7e-07 58.2 182 29.1
Potri.001G127500 Populus trichocarpa HOM05D003556 ORTHO05D003404 7.7e-07 58.2 178 29.2
CiPaw.08G093400 Carya illinoinensis HOM05D003556 ORTHO05D003404 1.3e-06 57.4 172 25.6
Migut.G01351 Erythranthe guttata HOM05D022792 ORTHO05D001819 1.7e-06 57.0 144 30.6
ATR1149G037 Amborella trichopoda HOM05D003556 ORTHO05D003404 2.9e-06 56.2 179 29.1
DCAR_001364 Daucus carota HOM05D004113 ORTHO05D005233 2.9e-06 56.2 151 27.8
MBI07_g43317_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D001261 2.9e-06 56.2 133 25.6
MBI19_g26316_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D010317 2.9e-06 56.2 169 27.8
TAR636G3366 Trochodendron aralioides HOM05D004113 ORTHO05D005233 2.9e-06 56.2 179 27.4
CsaV3_4G000950 Cucumis sativus L. HOM05D003556 ORTHO05D003404 3.8e-06 55.8 163 27.0
Migut.I00083 Erythranthe guttata HOM05D011410 ORTHO05D013015 3.8e-06 55.8 146 26.0
MBI07_g46097_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D013640 3.8e-06 55.8 133 24.8
MBI19_g08236_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D010044 3.8e-06 55.8 166 27.1
MBI19_g19941_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D010317 3.8e-06 55.8 171 28.7
QL05p060436 Quercus lobata HOM05D012615 ORTHO05D010044 5.0e-06 55.5 146 26.0
Haze_04964 Corylus avellana HOM05D003556 ORTHO05D003404 6.6e-06 55.1 171 26.9
MBI19_g19942_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D010317 6.6e-06 55.1 171 28.7
PSO724G1245 Papaver somniferum HOM05D008191 ORTHO05D010044 8.6e-06 54.7 160 23.8
SGA_v2.0_scaffold186G40153 Striga asiatica HOM05D008403 ORTHO05D010317 8.6e-06 54.7 121 33.9


User provided reference genes

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