Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 3.6e-51 204.5 96 100.0
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 5.8e-33 144.1 92 72.8
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 9.8e-33 143.3 74 79.7
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 2.9e-32 141.7 91 67.0
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 3.7e-32 141.4 103 59.2
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 1.1e-31 139.8 103 58.3
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 1.9e-31 139.0 103 58.3
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 7.0e-31 137.1 93 63.4
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 2.0e-30 135.6 104 60.6
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 3.5e-30 134.8 96 61.5
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.3e-29 132.9 92 65.2
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 1.3e-29 132.9 84 66.7
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 3.0e-29 131.7 105 58.1
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 8.6e-29 130.2 93 62.4
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 8.6e-29 130.2 90 62.2
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 1.5e-28 129.4 88 64.8
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 1.5e-28 129.4 90 63.3
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 2.5e-28 128.6 101 59.4
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 5.6e-28 127.5 90 64.4
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 9.5e-28 126.7 72 66.7
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 9.5e-28 126.7 89 62.9
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 1.2e-27 126.3 97 59.8
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 1.8e-26 122.5 88 61.4
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 2.3e-26 122.1 94 56.4
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 4.0e-26 121.3 88 54.5
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 6.8e-26 120.6 86 59.3
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 8.9e-26 120.2 100 58.0
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 1.2e-25 119.8 87 58.6
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.5e-25 119.4 97 59.8
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 1.5e-25 119.4 97 59.8
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 1.5e-25 119.4 87 56.3
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 2.6e-25 118.6 91 57.1
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 9.8e-25 116.7 101 53.5
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 1.3e-24 116.3 92 57.6
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 1.7e-24 115.9 95 52.6
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.7e-24 115.9 97 57.7
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 1.1e-23 113.2 89 56.2
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 2.4e-23 112.1 87 50.6
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 2.4e-23 112.1 87 50.6
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 4.1e-23 111.3 99 56.6
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 5.4e-23 110.9 86 55.8
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 7.1e-23 110.5 85 55.3
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 1.2e-22 109.8 88 55.7
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 1.2e-22 109.8 87 49.4
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 1.2e-22 109.8 89 50.6
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 4.6e-22 107.8 95 50.5
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 5.1e-21 104.4 70 61.4
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.5e-20 102.8 88 48.9
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 1.5e-20 102.8 69 62.3
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 5.6e-20 100.9 83 54.2
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 7.3e-20 100.5 98 50.0
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 7.3e-20 100.5 100 49.0
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 2.1e-19 99.0 70 58.6
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 4.7e-19 97.8 97 48.5
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 6.2e-19 97.4 97 50.5
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 8.1e-19 97.1 94 51.1
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 1.8e-18 95.9 94 47.9
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 3.1e-18 95.1 97 49.5
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 3.1e-18 95.1 100 44.0
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 3.1e-18 95.1 100 44.0
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 3.1e-18 95.1 100 44.0
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 8.9e-18 93.6 100 44.0
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 8.9e-18 93.6 100 44.0
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 1.5e-17 92.8 79 55.7
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 1.5e-17 92.8 79 55.7
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 1.5e-17 92.8 79 55.7
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 2.6e-17 92.0 67 55.2
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 3.4e-17 91.7 95 49.5
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 3.4e-17 91.7 97 48.5
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 1.7e-16 89.4 69 53.6
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 6.4e-16 87.4 65 55.4
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 6.4e-16 87.4 91 46.2
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 7.1e-15 84.0 65 53.8
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 7.1e-15 84.0 65 53.8
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 1.2e-14 83.2 92 44.6
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 2.1e-14 82.4 78 46.2
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 2.7e-14 82.0 56 55.4
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 3.5e-14 81.6 94 40.4
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 1.3e-13 79.7 71 47.9
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 3.9e-13 78.2 97 43.3
BcaB02g06429 Brassica carinata HOM05D007926 ORTHO05D009983 1.7e-08 62.8 65 47.7


User provided reference genes

Program Settings