Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.1e-22 108.2 53 100.0
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.7e-12 75.9 44 86.4
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 6.4e-12 73.9 44 77.3
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 1.1e-11 73.2 44 75.0
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 1.1e-11 73.2 44 79.5
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 1.4e-11 72.8 44 81.8
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 1.4e-11 72.8 44 77.3
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 2.4e-11 72.0 43 74.4
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.2e-11 71.6 44 77.3
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 3.2e-11 71.6 44 75.0
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 5.4e-11 70.9 44 72.7
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 9.2e-11 70.1 44 72.7
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 9.2e-11 70.1 43 76.7
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.2e-10 69.7 43 74.4
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.2e-10 69.7 43 74.4
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.2e-10 69.7 43 74.4
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 1.6e-10 69.3 44 70.5
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 1.6e-10 69.3 43 72.1
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 2.7e-10 68.6 43 67.4
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 2.7e-10 68.6 44 70.5
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 2.7e-10 68.6 43 69.8
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 2.7e-10 68.6 44 70.5
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 3.5e-10 68.2 44 70.5
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 3.5e-10 68.2 43 74.4
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 3.5e-10 68.2 44 70.5
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 4.6e-10 67.8 44 70.5
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 4.6e-10 67.8 44 70.5
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 4.6e-10 67.8 44 70.5
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 6.0e-10 67.4 44 72.7
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 6.0e-10 67.4 44 72.7
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 7.8e-10 67.0 44 68.2
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 1.0e-09 66.6 44 70.5
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.3e-09 66.2 44 68.2
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.3e-09 66.2 44 68.2
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.7e-09 65.9 44 68.2
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 2.3e-09 65.5 43 62.8
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 2.3e-09 65.5 43 65.1
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.0e-09 65.1 44 68.2
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 3.9e-09 64.7 44 68.2
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 5.1e-09 64.3 44 68.2
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 5.1e-09 64.3 44 65.9
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 5.1e-09 64.3 44 65.9
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 6.6e-09 63.9 44 68.2
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 6.6e-09 63.9 44 68.2
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 8.7e-09 63.5 44 61.4
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.1e-08 63.2 43 65.1
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.1e-08 63.2 43 65.1
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.1e-08 63.2 43 65.1
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.1e-08 63.2 43 65.1
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 1.5e-08 62.8 44 65.9
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.3e-08 61.6 44 63.6
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 5.6e-08 60.8 44 63.6
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 9.6e-08 60.1 44 59.1
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 9.6e-08 60.1 43 62.8
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.6e-07 59.3 44 61.4
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 1.6e-07 59.3 47 57.4
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 2.8e-07 58.5 44 61.4
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 2.8e-07 58.5 44 61.4
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 2.8e-07 58.5 44 65.9
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 3.6e-07 58.2 44 54.5
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 4.7e-07 57.8 43 62.8
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 4.7e-07 57.8 40 65.0
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 1.8e-06 55.8 38 60.5
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 3.1e-06 55.1 44 56.8
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 9.0e-06 53.5 44 59.1


User provided reference genes

Program Settings