Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.8e-130 469.2 227 100.0
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 9.5e-111 403.7 226 84.5
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 2.6e-108 395.6 241 80.5
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 3.9e-104 381.7 237 79.3
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 6.6e-96 354.4 217 77.9
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 7.6e-92 340.9 232 74.1
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 2.2e-91 339.3 238 72.3
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 1.9e-90 336.3 218 74.3
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 3.9e-88 328.6 215 74.0
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 3.9e-88 328.6 218 71.1
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 5.1e-88 328.2 235 69.8
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 2.5e-87 325.9 239 70.3
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 4.3e-87 325.1 213 74.2
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 1.8e-85 319.7 264 61.4
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 5.3e-85 318.2 235 70.2
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 9.0e-85 317.4 247 68.0
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 1.5e-84 316.6 206 73.8
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 2.0e-84 316.2 232 69.4
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 4.5e-84 315.1 226 69.0
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 4.5e-84 315.1 235 68.5
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 1.3e-83 313.5 205 75.6
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.3e-83 313.5 240 67.9
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 1.3e-83 313.5 232 69.4
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 2.9e-83 312.4 210 74.8
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 8.4e-83 310.8 233 69.5
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.1e-82 310.5 247 66.4
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 1.1e-82 310.5 236 66.9
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 2.4e-82 309.3 217 72.8
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.6e-81 306.6 247 65.6
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 3.5e-81 305.4 205 73.2
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 1.3e-80 303.5 188 79.3
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 1.8e-80 303.1 239 66.5
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 3.0e-80 302.4 218 71.1
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 3.9e-80 302.0 235 66.0
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 8.7e-80 300.8 205 73.2
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 8.7e-80 300.8 246 66.3
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 1.1e-79 300.4 189 77.2
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 1.5e-79 300.1 223 68.2
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.9e-79 299.7 213 73.7
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 2.5e-79 299.3 223 67.7
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 3.3e-79 298.9 213 70.9
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 1.3e-78 297.0 208 71.6
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.3e-78 297.0 208 71.6
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 2.1e-78 296.2 218 68.8
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 2.1e-78 296.2 210 68.1
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 2.8e-78 295.8 182 79.1
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 1.1e-77 293.9 186 76.9
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 1.4e-77 293.5 219 67.6
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 1.8e-77 293.1 213 70.0
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 2.4e-77 292.7 186 76.9
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 4.0e-77 292.0 186 77.4
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 6.9e-77 291.2 212 67.9
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 6.9e-77 291.2 210 69.0
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 9.0e-77 290.8 209 71.3
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 9.0e-77 290.8 213 69.5
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 1.2e-76 290.4 230 65.7
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 2.0e-76 289.7 203 69.5
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 2.0e-76 289.7 237 63.3
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 2.0e-76 289.7 213 68.5
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 7.6e-76 287.7 213 69.0
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 1.0e-75 287.3 213 68.1
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 1.3e-75 287.0 213 68.5
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 3.8e-75 285.4 213 67.6
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 6.5e-75 284.6 213 68.5
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 1.4e-74 283.5 216 66.2
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 3.2e-74 282.3 222 65.3
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 9.3e-74 280.8 215 63.7
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 2.7e-73 279.3 235 63.8
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 9.6e-71 270.8 235 60.4
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 1.6e-70 270.0 163 79.1
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 3.7e-70 268.9 235 59.6
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 8.2e-70 267.7 140 92.1
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 3.1e-69 265.8 235 60.0
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 3.1e-69 265.8 154 82.5
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 3.1e-69 265.8 212 61.8
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 5.8e-68 261.5 233 61.4
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 1.3e-67 260.4 209 64.1
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 3.8e-67 258.8 235 59.1
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 3.2e-66 255.8 188 67.6
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 9.3e-66 254.2 194 64.9
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 2.3e-64 249.6 167 71.3
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 8.7e-64 247.7 228 58.8
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 1.9e-63 246.5 235 56.2
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 2.5e-63 246.1 143 76.2
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 1.6e-62 243.4 156 73.7
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 1.8e-61 240.0 209 58.9
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 1.2e-60 237.3 179 64.8
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 1.5e-60 236.9 189 65.1
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 1.3e-59 233.8 232 57.8
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.3e-59 233.8 169 66.9
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 8.5e-59 231.1 190 63.7
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 8.5e-59 231.1 190 63.7
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 8.5e-59 231.1 190 63.7
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 8.5e-59 231.1 234 55.6
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 3.6e-57 225.7 235 55.3
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 6.1e-57 224.9 235 55.3
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 2.3e-56 223.0 222 55.4
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 8.8e-56 221.1 238 53.4
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 5.5e-50 201.8 220 53.2
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 2.3e-48 196.4 121 75.2
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 4.5e-44 182.2 145 59.3
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 1.1e-42 177.6 154 53.9
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.5e-39 167.2 135 64.4
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 2.2e-35 153.3 94 79.8
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 1.2e-33 147.5 142 50.0
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 2.6e-31 139.8 75 88.0
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.1e-29 134.4 81 79.0
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 3.6e-25 119.4 66 87.9
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 3.0e-24 116.3 59 83.1
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 9.8e-23 111.3 84 63.1
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 5.4e-13 79.0 88 45.5
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 4.7e-09 65.9 98 41.8
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 1.4e-08 64.3 123 38.2


User provided reference genes

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