Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G090200 Carya illinoinensis HOM05D007895 ORTHO05D010017 2.4e-181 638.6 304 100.0
QL05p073549 Quercus lobata HOM05D007895 ORTHO05D010017 2.8e-158 562.0 303 88.1
QL05p073789 Quercus lobata HOM05D007895 ORTHO05D010017 2.8e-158 562.0 303 88.1
Cfa000239 Carpinus fangiana HOM05D007895 ORTHO05D010017 7.6e-156 553.9 303 88.4
GSVIVG01002953001 Vitis vinifera HOM05D007895 ORTHO05D010017 1.0e-147 526.9 303 80.9
Thecc.06G218400 Theobroma cacao HOM05D007895 ORTHO05D010017 5.0e-147 524.6 303 79.5
Duzib235G1140 Durio zibethinus HOM05D007895 ORTHO05D010017 1.1e-146 523.5 303 79.2
Prupe.4G023000 Prunus persica HOM05D007895 ORTHO05D010017 2.5e-146 522.3 303 80.2
MD05G1343800 Malus domestica HOM05D007895 ORTHO05D010017 1.6e-145 519.6 303 79.5
MD10G1319500 Malus domestica HOM05D007895 ORTHO05D010017 4.6e-145 518.1 303 78.2
Gohir.D05G172500 Gossypium hirsutum HOM05D007895 ORTHO05D010017 3.9e-144 515.0 303 78.2
TAR627G0668 Trochodendron aralioides HOM05D007895 ORTHO05D010017 3.9e-144 515.0 303 78.9
Gorai.009G177700 Gossypium raimondii HOM05D007895 ORTHO05D010017 1.1e-143 513.5 303 78.2
Potri.011G001800 Populus trichocarpa HOM05D007895 ORTHO05D010017 1.5e-143 513.1 303 77.9
Gohir.A05G169300 Gossypium hirsutum HOM05D007895 ORTHO05D010017 9.7e-143 510.4 303 77.6
Glyma.13G205700 Glycine max HOM05D007895 ORTHO05D010017 2.8e-142 508.8 305 78.4
Sabra11G0000700 Salix brachista HOM05D007895 ORTHO05D010017 3.7e-142 508.4 303 77.9
Dinv13880 Davidia involucrata HOM05D007895 ORTHO05D010017 8.2e-142 507.3 303 78.5
Glyma.15G106800 Glycine max HOM05D007895 ORTHO05D010017 1.1e-141 506.9 305 79.0
VMungo0540G0331 Vigna mungo HOM05D007895 ORTHO05D010017 6.9e-141 504.2 305 78.0
TPR.G7647 Trifolium pratense HOM05D007895 ORTHO05D010017 9.1e-141 503.8 305 76.7
Hma1.2p1_0057F.1_g031900 Hydrangea macrophylla HOM05D007895 ORTHO05D010017 1.5e-140 503.1 303 75.9
FvH4_3g02321 Fragaria vesca HOM05D007895 ORTHO05D010017 2.6e-140 502.3 306 75.5
RcHm_v2.0_Chr5g0003541 Rosa chinensis HOM05D007895 ORTHO05D010017 7.7e-140 500.7 306 76.1
Manes.17G037900 Manihot esculenta HOM05D007895 ORTHO05D010017 1.1e-138 496.9 303 76.9
Lalb_Chr18g0056281 Lupinus albus HOM05D007895 ORTHO05D010017 5.5e-138 494.6 305 76.4
Phvul.006G150500 Phaseolus vulgaris HOM05D007895 ORTHO05D010017 2.7e-137 492.3 305 76.7
Medtr2g022910 Medicago truncatula HOM05D007895 ORTHO05D010017 6.1e-137 491.1 305 74.8
Rhsim13G0155200 Rhododendron simsii HOM05D007895 ORTHO05D010017 1.4e-136 490.0 304 74.3
TWI63G1238 Tripterygium wilfordii HOM05D007895 ORTHO05D010017 4.8e-134 481.5 303 73.9
Psat1g181720 Pisum sativum HOM05D007895 ORTHO05D010017 1.1e-133 480.3 306 72.9
Oeu033195.1 Olea europaea HOM05D007895 ORTHO05D010017 3.5e-132 475.3 311 71.4
PGR004G2409 Punica granatum HOM05D007895 ORTHO05D010017 1.2e-129 466.8 304 71.7
CSS0036667 Camellia sinensis var. sinensis HOM05D007895 ORTHO05D010017 3.3e-127 458.8 303 71.9
EL10Ac8g20029 Beta vulgaris HOM05D007895 ORTHO05D010017 6.3e-126 454.5 303 67.3
COL.COLO4_31754 Corchorus olitorius HOM05D007895 ORTHO05D010017 7.0e-125 451.1 262 79.0
Nitab4.5_0003254g0060 Nicotiana tabacum HOM05D007895 ORTHO05D010017 2.6e-124 449.1 303 67.7
Cc09_g01830 Coffea canephora HOM05D007895 ORTHO05D010017 3.5e-124 448.7 303 69.0
Nitab4.5_0007482g0010 Nicotiana tabacum HOM05D007895 ORTHO05D010017 3.8e-123 445.3 303 67.0
Lj6g0014344 Lotus japonicus HOM05D007895 ORTHO05D010017 2.5e-122 442.6 275 75.3
CAN.G569.16 Capsicum annuum HOM05D007895 ORTHO05D010017 7.2e-122 441.0 303 65.3
Ciclev10017921m.g Citrus clementina HOM05D007895 ORTHO05D010017 2.7e-121 439.1 303 68.6
CANSAT56G1122 Cannabis sativa HOM05D007895 ORTHO05D010017 3.0e-120 435.6 275 75.6
MBI18_g12452_MAGBIO Magnolia biondii HOM05D007895 ORTHO05D010017 4.0e-120 435.3 305 67.2
DCAR_004211 Daucus carota HOM05D007895 ORTHO05D010017 2.7e-116 422.5 304 64.8
THA.LOC104806298 Tarenaya hassleriana HOM05D007895 ORTHO05D010017 1.3e-115 420.2 305 66.9
Ah.09g235010 Amaranthus hybridus HOM05D007895 ORTHO05D010017 1.6e-113 413.3 303 62.7
MSTRG.7225 Avicennia marina HOM05D007895 ORTHO05D010017 6.1e-113 411.4 271 72.0
Cpa.g.sc189.18 Carica papaya HOM05D007895 ORTHO05D010017 6.8e-112 407.9 244 77.9
ATR0752G052 Amborella trichopoda HOM05D007895 ORTHO05D010017 1.7e-110 403.3 310 63.5
BolC1t01543H Brassica oleracea HOM05D007895 ORTHO05D010017 1.7e-107 393.3 309 61.8
Carub.0007s1948 Capsella rubella HOM05D007895 ORTHO05D010017 8.6e-107 391.0 304 62.5
Lsat_1_v5_gn_7_17681 Lactuca sativa HOM05D007895 ORTHO05D010017 8.6e-107 391.0 306 62.1
Cc00_g03030 Coffea canephora HOM05D007895 ORTHO05D010017 2.5e-106 389.4 263 68.4
A01p13190 Brassica napus HOM05D007895 ORTHO05D010017 3.3e-106 389.0 309 61.2
BraA01t01263Z Brassica rapa HOM05D007895 ORTHO05D010017 3.3e-106 389.0 309 61.2
BcaNung02255 Brassica carinata HOM05D007895 ORTHO05D010017 7.2e-106 387.9 314 60.2
CDE05G3159 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 7.2e-106 387.9 293 63.1
CDE02G0632 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 2.8e-105 386.0 303 61.1
Lalb_Chr15g0087521 Lupinus albus HOM05D007895 ORTHO05D010017 4.7e-105 385.2 224 80.8
BcaC09g51191 Brassica carinata HOM05D007895 ORTHO05D010017 1.8e-104 383.3 309 60.5
C01p15890 Brassica napus HOM05D007895 ORTHO05D010017 1.8e-104 383.3 309 60.5
AUR62021973 Chenopodium quinoa HOM05D007895 ORTHO05D010017 4.0e-104 382.1 272 64.7
AUR62012684 Chenopodium quinoa HOM05D007895 ORTHO05D010017 1.5e-103 380.2 272 64.3
Thhalv10026963m.g Eutrema salsugineum HOM05D007895 ORTHO05D010017 1.3e-99 367.1 256 67.2
CARHR228650 Cardamine hirsuta HOM05D007895 ORTHO05D010017 6.6e-99 364.8 256 68.0
AT4G21890 Arabidopsis thaliana HOM05D007895 ORTHO05D010017 4.7e-97 358.6 252 67.1
Sp7g20040 Schrenkiella parvula HOM05D007895 ORTHO05D010017 8.0e-97 357.8 302 58.6
Aa31LG6G3880 Aethionema arabicum HOM05D007895 ORTHO05D010017 5.0e-91 338.6 255 64.7
Aqoxy1G03251 Aquilegia oxysepala HOM05D007895 ORTHO05D010017 4.4e-79 298.9 204 71.6
Mapoly0063s0045 Marchantia polymorpha HOM05D007895 ORTHO05D010017 3.5e-60 236.1 309 42.4
AagrBONN_evm.TU.Sc2ySwM_117.3222 Anthoceros agrestis HOM05D007895 ORTHO05D010017 5.1e-59 232.3 306 41.8
SalBow8G0130 Salvia bowleyana HOM05D007895 ORTHO05D010017 1.2e-55 221.1 170 62.9
Sc05g0009090 Simmondsia chinensis HOM05D007895 ORTHO05D010017 7.1e-53 211.8 169 59.2
SMO351G0184 Selaginella moellendorffii HOM05D007895 ORTHO05D010017 2.5e-50 203.4 312 38.1
Mapoly0021s0002 Marchantia polymorpha HOM05D007895 ORTHO05D010017 3.8e-38 162.9 316 33.5
HPP92_001781 Vanilla planifolia HOM05D007895 ORTHO05D010017 8.2e-33 145.2 129 58.9
CAN.G328.16 Capsicum annuum HOM05D007895 ORTHO05D010017 1.7e-25 120.9 152 42.8
Lalb_Chr15g0087511 Lupinus albus HOM05D007895 ORTHO05D010017 2.6e-10 70.5 51 62.7


User provided reference genes

Program Settings