Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G090000 Carya illinoinensis HOM05D005165 ORTHO05D006361 4.7e-226 787.7 458 100.0
Cfa000241 Carpinus fangiana HOM05D005165 ORTHO05D006361 3.8e-159 565.5 489 64.8
Haze_06780 Corylus avellana HOM05D005165 ORTHO05D006361 7.7e-152 541.2 519 60.1
QL05p073800 Quercus lobata HOM05D005165 ORTHO05D006361 9.1e-145 517.7 426 66.2
RcHm_v2.0_Chr5g0003561 Rosa chinensis HOM05D005165 ORTHO05D006361 1.8e-124 450.3 551 57.2
Dinv13878 Davidia involucrata HOM05D005165 ORTHO05D006361 2.3e-124 449.9 447 65.8
Ciclev10014034m.g Citrus clementina HOM05D005165 ORTHO05D006361 1.6e-120 437.2 398 59.0
MD10G1319300 Malus domestica HOM05D005165 ORTHO05D006361 8.6e-119 431.4 451 64.7
TAR627G0931 Trochodendron aralioides HOM05D005165 ORTHO05D006361 1.6e-117 427.2 388 70.9
ClCG03G004830 Citrullus lanatus HOM05D005165 ORTHO05D006361 3.6e-117 426.0 443 64.1
Actinidia05522 Actinidia chinensis HOM05D005165 ORTHO05D006361 8.9e-116 421.4 452 55.5
GSVIVG01004517001 Vitis vinifera HOM05D005165 ORTHO05D006361 1.4e-113 414.1 420 57.1
Nn1g03565 Nelumbo nucifera HOM05D005165 ORTHO05D006361 1.9e-113 413.7 452 51.3
Cc09_g01850 Coffea canephora HOM05D005165 ORTHO05D006361 3.2e-113 412.9 402 67.7
FAN21G2432 Fragaria x ananassa HOM05D005165 ORTHO05D006361 3.2e-113 412.9 446 54.7
CsaV3_1G010870 Cucumis sativus L. HOM05D005165 ORTHO05D006361 6.0e-112 408.7 442 62.7
arahy.Tifrunner.gnm1.ann1.FU33AK Arachis hypogaea HOM05D005165 ORTHO05D006361 5.1e-111 405.6 553 53.3
COL.COLO4_31753 Corchorus olitorius HOM05D005165 ORTHO05D006361 2.5e-110 403.3 450 62.4
arahy.Tifrunner.gnm1.ann1.K6JFDD Arachis hypogaea HOM05D005165 ORTHO05D006361 4.3e-110 402.5 555 45.4
Manes.17G037700 Manihot esculenta HOM05D005165 ORTHO05D006361 5.6e-110 402.1 437 61.1
Prupe.4G023200 Prunus persica HOM05D005165 ORTHO05D006361 6.2e-109 398.7 407 62.4
Sed0027912 Sechium edule HOM05D005165 ORTHO05D006361 1.8e-108 397.1 442 57.9
Lj4g0017916 Lotus japonicus HOM05D005165 ORTHO05D006361 3.1e-108 396.4 451 60.5
Potri.004G017500 Populus trichocarpa HOM05D005165 ORTHO05D006361 4.0e-108 396.0 560 45.5
arahy.Tifrunner.gnm1.ann1.QZ1TNI Arachis hypogaea HOM05D005165 ORTHO05D006361 8.9e-108 394.8 562 44.5
Lalb_Chr01g0014921 Lupinus albus HOM05D005165 ORTHO05D006361 1.2e-107 394.4 529 54.3
Duzib235G1549 Durio zibethinus HOM05D005165 ORTHO05D006361 2.0e-107 393.7 460 56.7
MELO3C002466.2 Cucumis melo HOM05D005165 ORTHO05D006361 5.8e-107 392.1 503 55.5
Thecc.06G218200 Theobroma cacao HOM05D005165 ORTHO05D006361 7.6e-107 391.7 461 59.0
vmacro03694 Vaccinium macrocarpon HOM05D005165 ORTHO05D006361 9.9e-107 391.3 494 53.0
VMungo1215G1456 Vigna mungo HOM05D005165 ORTHO05D000002 9.9e-107 391.3 557 53.0
Atru.chr10.2199 Acer truncatum HOM05D005165 ORTHO05D006361 3.8e-106 389.4 552 51.4
Glyma.17G014900 Glycine max HOM05D005165 ORTHO05D006361 4.9e-106 389.0 536 53.4
Phvul.003G077600 Phaseolus vulgaris HOM05D005165 ORTHO05D006361 1.1e-105 387.9 529 54.1
Sabra04G0009600 Salix brachista HOM05D005165 ORTHO05D006361 2.1e-104 383.6 574 50.5
CSS0001066 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 7.8e-104 381.7 312 65.1
Lj2C270G14 Lonicera japonica HOM05D005165 ORTHO05D006361 1.7e-103 380.6 390 58.2
CSS0012929 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 3.0e-103 379.8 402 60.2
Glyma.07G259400 Glycine max HOM05D005165 ORTHO05D006361 4.7e-101 372.5 552 50.9
Medtr4g131940 Medicago truncatula HOM05D005165 ORTHO05D006361 6.2e-101 372.1 559 50.4
Oeu063907.1 Olea europaea HOM05D005165 ORTHO05D006361 9.0e-100 368.2 344 58.4
Ca_21091_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 2.0e-99 367.1 443 48.8
Ca_30199_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 2.0e-99 367.1 443 48.8
Aqoxy1G03259 Aquilegia oxysepala HOM05D005165 ORTHO05D006361 2.6e-99 366.7 451 57.0
FvH4_3g02340 Fragaria vesca HOM05D005165 ORTHO05D006361 1.3e-98 364.4 309 65.0
Cpa.g.sc198.37 Carica papaya HOM05D005165 ORTHO05D006361 3.8e-98 362.8 449 52.3
Nitab4.5_0007482g0050 Nicotiana tabacum HOM05D005165 ORTHO05D006361 4.9e-98 362.5 442 54.3
Rhsim13G0155600 Rhododendron simsii HOM05D005165 ORTHO05D006361 2.7e-96 356.7 351 57.3
Eucgr.D01308 Eucalyptus grandis HOM05D005165 ORTHO05D006361 1.3e-95 354.4 433 47.6
Gohir.A10G013700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 2.3e-95 353.6 420 58.3
CANSAT56G1527 Cannabis sativa HOM05D005165 ORTHO05D006361 5.1e-95 352.4 542 48.5
Psat4g007280 Pisum sativum HOM05D005165 ORTHO05D006361 5.1e-95 352.4 554 48.7
MSTRG.15979 Avicennia marina HOM05D005165 ORTHO05D006361 6.6e-95 352.1 310 60.6
CSS0020297 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 1.1e-94 351.3 402 51.2
TPR.G37081 Trifolium pratense HOM05D005165 ORTHO05D006361 2.5e-94 350.1 408 49.3
Hund23483 Selenicereus undatus HOM05D005165 ORTHO05D006361 4.3e-94 349.4 450 50.2
TWI63G0677 Tripterygium wilfordii HOM05D005165 ORTHO05D006361 1.3e-93 347.8 600 43.7
MBI02_g22104_MAGBIO Magnolia biondii HOM05D005165 ORTHO05D006361 2.1e-93 347.1 438 53.0
Migut.M01303 Erythranthe guttata HOM05D005165 ORTHO05D006361 8.1e-93 345.1 457 55.6
PGR004G2872 Punica granatum HOM05D005165 ORTHO05D006361 8.1e-93 345.1 385 63.1
FAN21G3214 Fragaria x ananassa HOM05D005165 ORTHO05D006361 1.8e-92 344.0 328 60.4
PSO675G7058 Papaver somniferum HOM05D005165 ORTHO05D006361 1.2e-91 341.3 483 52.0
PSO541G6479 Papaver somniferum HOM05D005165 ORTHO05D006361 1.5e-91 340.9 483 52.4
Gohir.D10G013600 Gossypium hirsutum HOM05D005165 ORTHO05D006361 2.6e-91 340.1 421 57.7
FAN25G1001 Fragaria x ananassa HOM05D005165 ORTHO05D006361 3.4e-91 339.7 356 55.9
HanXRQChr05g0129591 Helianthus annuus HOM05D005165 ORTHO05D006361 9.9e-91 338.2 277 60.6
Nitab4.5_0003254g0110 Nicotiana tabacum HOM05D005165 ORTHO05D006361 1.3e-90 337.8 417 59.2
BcaNung02250 Brassica carinata HOM05D005165 ORTHO05D006361 3.8e-90 336.3 465 51.8
Ah.09g235020 Amaranthus hybridus HOM05D005165 ORTHO05D006361 3.5e-88 329.7 452 53.5
Gorai.011G015400 Gossypium raimondii HOM05D005165 ORTHO05D006361 7.9e-88 328.6 374 54.8
AUR62012682 Chenopodium quinoa HOM05D005165 ORTHO05D006361 5.1e-87 325.9 307 56.7
Peaxi162Scf00262g00611 Petunia axillaris HOM05D005165 ORTHO05D006361 5.1e-87 325.9 544 48.3
BcaC09g51197 Brassica carinata HOM05D005165 ORTHO05D006361 8.7e-87 325.1 466 45.7
C01p15840 Brassica napus HOM05D005165 ORTHO05D006361 8.7e-87 325.1 466 45.7
AUR62021974 Chenopodium quinoa HOM05D005165 ORTHO05D006361 1.1e-86 324.7 307 57.0
BolC1t01538H Brassica oleracea HOM05D005165 ORTHO05D006361 1.5e-86 324.3 466 45.7
DCAR_004209 Daucus carota HOM05D005165 ORTHO05D006361 2.4e-84 317.0 475 44.0
Thhalv10024235m.g Eutrema salsugineum HOM05D005165 ORTHO05D006361 1.2e-83 314.7 410 53.9
Lsat_1_v5_gn_7_17640 Lactuca sativa HOM05D005165 ORTHO05D006361 3.4e-83 313.2 315 52.1
Gorai.010G179700 Gossypium raimondii HOM05D005165 ORTHO05D006361 9.9e-83 311.6 446 43.7
SGA_v2.0_scaffold4G01924 Striga asiatica HOM05D005165 ORTHO05D006361 1.7e-82 310.8 458 51.5
Carub.0007s1958 Capsella rubella HOM05D005165 ORTHO05D006361 2.2e-82 310.5 406 54.2
Gohir.D06G153700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 4.9e-82 309.3 446 43.5
AT4G21820 Arabidopsis thaliana HOM05D005165 ORTHO05D006361 8.4e-82 308.5 407 50.9
Sc17g0007260 Simmondsia chinensis HOM05D005165 ORTHO05D006361 7.9e-80 302.0 311 53.7
Sp7g19990 Schrenkiella parvula HOM05D005165 ORTHO05D006361 3.0e-79 300.1 412 45.6
THA.LOC104813036 Tarenaya hassleriana HOM05D005165 ORTHO05D006361 1.5e-78 297.7 306 52.3
Aa31LG6G3830 Aethionema arabicum HOM05D005165 ORTHO05D006361 1.9e-78 297.4 409 48.7
A01p13150 Brassica napus HOM05D005165 ORTHO05D006361 4.3e-78 296.2 303 53.1
BraA01t01259Z Brassica rapa HOM05D005165 ORTHO05D006361 4.3e-78 296.2 303 53.1
Sopen02g025090 Solanum pennellii HOM05D005165 ORTHO05D006361 1.1e-76 291.6 454 42.3
PGSC0003DMG400016486 Solanum tuberosum HOM05D005165 ORTHO05D006361 6.9e-76 288.9 231 66.7
CARHR228530 Cardamine hirsuta HOM05D005165 ORTHO05D006361 1.3e-74 284.6 457 43.8
EL10Ac8g20027 Beta vulgaris HOM05D005165 ORTHO05D006361 6.5e-74 282.3 511 46.8
CSS0021361 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 4.2e-73 279.6 240 63.8
unitig_748.g7100 Utricularia gibba HOM05D005165 ORTHO05D006361 1.2e-72 278.1 311 50.8
ECA236G1313 Erigeron canadensis HOM05D005165 ORTHO05D006361 2.3e-71 273.9 230 60.9
QL05p073557 Quercus lobata HOM05D005165 ORTHO05D006361 6.7e-71 272.3 166 81.9
CDE05G2160 Ceratophyllum demersum HOM05D005165 ORTHO05D006361 8.5e-66 255.4 481 36.0
GSVIVG01002955001 Vitis vinifera HOM05D005165 ORTHO05D006361 1.4e-55 221.5 155 72.3
SEGI_17063 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 6.7e-55 219.2 267 44.6
ATR0752G007 Amborella trichopoda HOM05D005165 ORTHO05D006361 3.6e-48 196.8 237 50.2
Zm00001eb322760 Zea mays HOM05D005165 ORTHO05D006361 8.2e-45 185.7 535 28.4
Solyc02g080400.3 Solanum lycopersicum HOM05D005165 ORTHO05D006361 3.1e-44 183.7 159 62.3
CAN.G569.18 Capsicum annuum HOM05D005165 ORTHO05D006361 7.2e-41 172.6 127 69.3
AagrBONN_evm.TU.Sc2ySwM_117.1637__1638 Anthoceros agrestis HOM05D005165 ORTHO05D006361 6.7e-39 166.0 273 39.2
Pp3c24_1350 Physcomitrium patens HOM05D005165 ORTHO05D006361 1.3e-37 161.8 272 39.3
SMO200G0122 Selaginella moellendorffii HOM05D005165 ORTHO05D006361 1.7e-37 161.4 248 37.9
SGA_v2.0_scaffold186G40236 Striga asiatica HOM05D005165 ORTHO05D006361 8.2e-37 159.1 151 58.3
HPP92_012397 Vanilla planifolia HOM05D005165 ORTHO05D006361 1.7e-34 151.4 143 58.0
HPP92_012318 Vanilla planifolia HOM05D005165 ORTHO05D006361 3.8e-34 150.2 397 29.7
Mapoly0043s0047 Marchantia polymorpha HOM05D005165 ORTHO05D006361 5.5e-33 146.4 262 35.9
AL7G32100 Arabidopsis lyrata HOM05D005165 ORTHO05D006361 1.5e-25 121.7 97 59.8
SEGI_30095 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 2.3e-23 114.4 120 47.5
AL7G32110 Arabidopsis lyrata HOM05D005165 ORTHO05D006361 4.4e-22 110.2 250 41.2
Solyc02g080390.2 Solanum lycopersicum HOM05D005165 ORTHO05D006361 5.4e-20 103.2 295 29.8
CBR_g12408 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-19 101.3 247 29.6
SEGI_29404 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 1.4e-12 78.6 289 25.6
Gohir.A06G147800 Gossypium hirsutum HOM05D005165 ORTHO05D006361 1.2e-06 58.9 84 40.5


User provided reference genes

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