Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 8.7e-134 481.9 715 100.0
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 1.9e-80 304.7 700 90.4
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 2.0e-66 258.1 686 88.0
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 6.6e-65 253.1 717 83.7
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 3.3e-64 250.8 183 74.3
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 2.1e-63 248.1 717 82.6
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 1.8e-59 235.0 715 83.2
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 3.1e-59 234.2 717 76.8
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 1.2e-58 232.3 717 77.5
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 2.7e-58 231.1 710 81.5
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 1.9e-56 224.9 716 82.1
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 2.5e-56 224.6 664 86.3
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 5.6e-56 223.4 688 85.3
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 2.1e-55 221.5 662 86.3
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 2.8e-55 221.1 720 83.1
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 8.0e-55 219.5 647 85.6
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 1.4e-54 218.8 715 77.1
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 1.4e-54 218.8 715 78.7
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 1.8e-54 218.4 715 82.1
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 1.8e-54 218.4 709 74.8
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 6.8e-54 216.5 727 82.5
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 1.2e-53 215.7 644 87.4
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 2.6e-53 214.5 670 84.5
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 9.8e-53 212.6 665 86.3
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 1.3e-52 212.2 705 80.9
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 4.9e-52 210.3 711 75.2
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 4.1e-51 207.2 717 81.5
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 5.4e-51 206.8 711 79.5
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 5.4e-51 206.8 711 79.5
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 9.2e-51 206.1 711 81.2
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 1.2e-50 205.7 677 86.3
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 2.0e-50 204.9 669 85.4
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 1.0e-49 202.6 170 64.1
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 3.0e-49 201.1 199 55.3
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 3.9e-49 200.7 705 75.0
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 8.6e-49 199.5 662 73.4
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 1.9e-48 198.4 709 73.3
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 2.5e-48 198.0 711 75.0
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 3.3e-48 197.6 711 75.0
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 2.8e-47 194.5 667 84.0
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 6.2e-47 193.4 626 87.9
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.2e-46 190.3 125 73.6
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 5.2e-46 190.3 714 67.5
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 6.8e-46 189.9 651 86.3
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 1.2e-45 189.1 195 55.9
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 1.2e-45 189.1 651 70.5
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 2.0e-45 188.3 666 83.6
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 2.6e-45 188.0 200 52.5
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 1.3e-44 185.7 153 61.4
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 1.7e-44 185.3 194 55.2
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 3.7e-44 184.1 718 81.1
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 4.9e-44 183.7 195 54.9
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 4.9e-44 183.7 195 54.9
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.9e-44 183.7 125 72.0
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 4.9e-44 183.7 641 86.0
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 4.9e-44 183.7 155 60.6
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 4.9e-44 183.7 667 82.0
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 6.4e-44 183.3 198 54.0
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 1.4e-43 182.2 144 63.9
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 1.4e-43 182.2 144 63.9
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 1.9e-43 181.8 144 63.9
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 1.9e-43 181.8 667 81.9
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 1.6e-42 178.7 174 55.2
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 6.0e-42 176.8 712 78.5
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 1.0e-41 176.0 667 81.6
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 2.3e-41 174.9 698 79.9
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 6.6e-41 173.3 200 49.0
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 1.5e-40 172.2 690 76.8
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 2.5e-40 171.4 124 66.9
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 4.3e-40 170.6 132 67.4
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 4.3e-40 170.6 125 67.2
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 9.5e-40 169.5 684 69.9
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 2.1e-39 168.3 169 55.0
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 2.1e-39 168.3 659 65.9
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 3.1e-38 164.5 154 57.1
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 4.0e-38 164.1 119 66.4
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 6.8e-38 163.3 156 60.3
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 1.5e-37 162.2 120 69.2
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 3.4e-37 161.0 139 64.7
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 6.4e-36 156.8 137 60.6
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 1.1e-35 156.0 138 60.9
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 2.4e-35 154.8 110 71.8
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 9.2e-35 152.9 136 59.6
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 1.0e-33 149.4 687 80.5
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 5.1e-33 147.1 95 77.9
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 1.6e-31 142.1 674 67.1
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.8e-31 141.4 94 70.2
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 6.2e-31 140.2 190 47.9
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 1.4e-30 139.0 107 66.4
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 1.5e-29 135.6 107 63.6
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.6e-29 134.8 79 81.0
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 5.8e-29 133.7 85 74.1
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 8.4e-28 129.8 108 60.2
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 1.2e-26 125.9 92 63.0
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.6e-26 125.6 135 53.3
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.6e-26 124.0 79 74.7
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 4.6e-26 124.0 666 62.5
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 5.1e-25 120.6 132 49.2
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 6.2e-23 113.6 107 57.0
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 4.0e-22 110.9 77 70.1
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 6.9e-22 110.2 162 43.2
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 2.6e-21 108.2 142 46.5
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 4.4e-21 107.5 142 45.8
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 1.3e-20 105.9 69 72.5
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 9.3e-19 99.8 162 41.4
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 1.7e-17 95.5 95 55.8
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 1.7e-17 95.5 95 55.8
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.3e-15 89.4 60 68.3
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 2.8e-15 88.2 95 44.2
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.0e-13 82.0 50 78.0
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 2.9e-12 78.2 71 60.6
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 1.1e-11 76.3 103 41.7
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 2.4e-11 75.1 144 30.6
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 2.4e-11 75.1 144 30.6


User provided reference genes

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