Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G074800 Carya illinoinensis HOM05D008198 ORTHO05D010220 2.3e-64 248.8 135 100.0
QL11p013556 Quercus lobata HOM05D008198 ORTHO05D010220 1.4e-37 159.8 143 70.6
Haze_06107 Corylus avellana HOM05D008198 ORTHO05D010220 1.2e-33 146.7 135 65.9
Cfa000688 Carpinus fangiana HOM05D008198 ORTHO05D010220 1.6e-33 146.4 138 68.1
CiPaw.10G063000 Carya illinoinensis HOM05D008198 ORTHO05D010220 1.4e-32 143.3 134 60.4
ClCG01G025660 Citrullus lanatus HOM05D008198 ORTHO05D010220 1.0e-27 127.1 133 51.9
MD05G1249200 Malus domestica HOM05D008198 ORTHO05D010220 3.9e-27 125.2 131 55.0
Prupe.4G115000 Prunus persica HOM05D008198 ORTHO05D010220 7.3e-26 120.9 120 56.7
Potri.001G123300 Populus trichocarpa HOM05D008198 ORTHO05D010220 2.8e-25 119.0 126 54.0
Manes.03G073400 Manihot esculenta HOM05D008198 ORTHO05D010220 1.4e-24 116.7 135 52.6
RcHm_v2.0_Chr5g0020591 Rosa chinensis HOM05D008198 ORTHO05D010220 4.0e-24 115.2 126 50.8
Sabra01G0095000 Salix brachista HOM05D008198 ORTHO05D010220 5.3e-24 114.8 126 52.4
Nn7g38206 Nelumbo nucifera HOM05D008198 ORTHO05D010220 2.6e-23 112.5 135 45.2
Glyma.05G131701 Glycine max HOM05D008198 ORTHO05D010220 3.4e-23 112.1 80 67.5
MD10G1229700 Malus domestica HOM05D008198 ORTHO05D010220 3.4e-23 112.1 132 50.8
Oeu058939.1 Olea europaea HOM05D008198 ORTHO05D010220 4.5e-23 111.7 127 49.6
Thecc.02G006400 Theobroma cacao HOM05D008198 ORTHO05D010220 4.5e-23 111.7 130 60.0
VMungo0251G3138 Vigna mungo HOM05D008198 ORTHO05D010220 5.8e-23 111.3 98 61.2
Duzib248G0575 Durio zibethinus HOM05D008198 ORTHO05D010220 9.9e-23 110.5 130 58.5
Sed0017835 Sechium edule HOM05D008198 ORTHO05D010220 1.1e-21 107.1 135 45.9
Gohir.A03G217600 Gossypium hirsutum HOM05D008198 ORTHO05D010220 1.9e-21 106.3 127 51.2
FAN21G2662 Fragaria x ananassa HOM05D008198 ORTHO05D010220 2.4e-21 105.9 126 48.4
Gohir.D02G239700 Gossypium hirsutum HOM05D008198 ORTHO05D010220 2.4e-21 105.9 139 50.4
Glyma.08G086200 Glycine max HOM05D008198 ORTHO05D010220 4.2e-21 105.1 89 64.0
Gorai.005G268000 Gossypium raimondii HOM05D008198 ORTHO05D010220 9.3e-21 104.0 126 50.0
Potri.003G110200 Populus trichocarpa HOM05D008198 ORTHO05D010220 1.2e-20 103.6 142 47.9
Lj4g0024937 Lotus japonicus HOM05D008198 ORTHO05D010220 3.5e-20 102.1 77 67.5
FvH4_3g12620 Fragaria vesca HOM05D008198 ORTHO05D010220 1.0e-19 100.5 126 53.2
Sabra03G0076400 Salix brachista HOM05D008198 ORTHO05D010220 1.0e-19 100.5 140 46.4
FAN25G2935 Fragaria x ananassa HOM05D008198 ORTHO05D010220 1.3e-19 100.1 126 54.8
Dinv09067 Davidia involucrata HOM05D008198 ORTHO05D010220 3.9e-19 98.6 113 51.3
COL.COLO4_17639 Corchorus olitorius HOM05D008198 ORTHO05D010220 5.1e-19 98.2 144 50.0
Ca_18253_v3 Cicer arietinum L. HOM05D008198 ORTHO05D010220 1.5e-18 96.7 75 66.7
CSS0019680 Camellia sinensis var. sinensis HOM05D008198 ORTHO05D010220 7.4e-18 94.4 72 69.4
Lalb_Chr07g0188441 Lupinus albus HOM05D008198 ORTHO05D010220 7.4e-18 94.4 83 62.7
TWI38G1073 Tripterygium wilfordii HOM05D008198 ORTHO05D010220 7.4e-18 94.4 92 60.9
Phvul.002G191200 Phaseolus vulgaris HOM05D008198 ORTHO05D010220 1.6e-17 93.2 75 61.3
TPR.G11001 Trifolium pratense HOM05D008198 ORTHO05D010220 2.8e-17 92.4 83 57.8
SalBow8G3784 Salvia bowleyana HOM05D008198 ORTHO05D010220 4.8e-17 91.7 71 63.4
Atru.chr10.441 Acer truncatum HOM05D008198 ORTHO05D010220 8.1e-17 90.9 87 56.3
CARHR226750 Cardamine hirsuta HOM05D008198 ORTHO05D010220 2.0e-15 86.3 107 48.6
Migut.M01995 Erythranthe guttata HOM05D008198 ORTHO05D010220 2.0e-15 86.3 131 48.9
Sopen02g017700 Solanum pennellii HOM05D008198 ORTHO05D010220 2.0e-15 86.3 95 52.6
Medtr4g094640 Medicago truncatula HOM05D008198 ORTHO05D010220 4.5e-15 85.1 76 59.2
Carub.0007s2117 Capsella rubella HOM05D008198 ORTHO05D010220 4.9e-14 81.6 97 51.5
PGSC0003DMG400010446 Solanum tuberosum HOM05D008198 ORTHO05D010220 6.4e-14 81.3 75 57.3
Ciclev10017172m.g Citrus clementina HOM05D008198 ORTHO05D010220 1.1e-13 80.5 145 41.4
Psat7g089000 Pisum sativum HOM05D008198 ORTHO05D010220 3.2e-13 79.0 69 62.3
AL7G33930 Arabidopsis lyrata HOM05D008198 ORTHO05D010220 4.2e-13 78.6 93 52.7
AT4G19980 Arabidopsis thaliana HOM05D008198 ORTHO05D010220 1.2e-12 77.0 95 50.5
BcaNung01739 Brassica carinata HOM05D008198 ORTHO05D010220 1.2e-12 77.0 94 47.9
Thhalv10026564m.g Eutrema salsugineum HOM05D008198 ORTHO05D010220 1.2e-12 77.0 96 45.8
Sp7g18430 Schrenkiella parvula HOM05D008198 ORTHO05D010220 1.6e-12 76.6 94 46.8
Lalb_Chr04g0257791 Lupinus albus HOM05D008198 ORTHO05D010220 6.0e-12 74.7 69 56.5
Actinidia22419 Actinidia chinensis HOM05D008198 ORTHO05D010220 7.9e-12 74.3 64 62.5
A01p11780 Brassica napus HOM05D008198 ORTHO05D010220 1.0e-11 73.9 94 48.9
BraA01t01120Z Brassica rapa HOM05D008198 ORTHO05D010220 1.0e-11 73.9 94 48.9
BcaC09g51355 Brassica carinata HOM05D008198 ORTHO05D010220 1.3e-11 73.6 95 48.4
Eucgr.L01648 Eucalyptus grandis HOM05D008198 ORTHO05D010220 3.0e-11 72.4 67 59.7
SGA_v2.0_scaffold298G47697 Striga asiatica HOM05D008198 ORTHO05D010220 3.0e-11 72.4 66 53.0
C01p13980 Brassica napus HOM05D008198 ORTHO05D010220 1.9e-10 69.7 94 46.8
BolC1t01365H Brassica oleracea HOM05D008198 ORTHO05D010220 1.9e-10 69.7 94 46.8
Cpa.g.sc30.141 Carica papaya HOM05D008198 ORTHO05D010220 8.2e-09 64.3 93 47.3
Aa31LG6G2390 Aethionema arabicum HOM05D008198 ORTHO05D010220 2.6e-07 59.3 76 39.5
C03p82100 Brassica napus HOM05D008198 ORTHO05D010220 3.4e-07 58.9 68 47.1
BolC3t20547H Brassica oleracea HOM05D008198 ORTHO05D010220 3.4e-07 58.9 68 47.1


User provided reference genes

Program Settings