Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G074600 Carya illinoinensis HOM05D006242 ORTHO05D007936 3.3e-113 411.8 211 100.0
Cfa000677 Carpinus fangiana HOM05D006242 ORTHO05D007936 5.6e-97 357.8 211 84.4
Haze_06141 Corylus avellana HOM05D006242 ORTHO05D007936 2.8e-96 355.5 211 85.3
QL11p013482 Quercus lobata HOM05D006242 ORTHO05D007936 1.1e-95 353.6 210 83.3
Atru.chr10.429 Acer truncatum HOM05D006242 ORTHO05D007936 3.9e-90 335.1 209 78.5
MD10G1229500 Malus domestica HOM05D006242 ORTHO05D007936 1.9e-89 332.8 211 78.2
Dinv10532 Davidia involucrata HOM05D006242 ORTHO05D007936 1.6e-88 329.7 209 76.1
Prupe.4G115300 Prunus persica HOM05D006242 ORTHO05D007936 6.2e-88 327.8 211 76.8
CSS0025117 Camellia sinensis var. sinensis HOM05D006242 ORTHO05D007936 4.9e-85 318.2 207 72.5
Manes.03G074100 Manihot esculenta HOM05D006242 ORTHO05D007936 4.9e-85 318.2 211 73.9
Rhsim06G0063600 Rhododendron simsii HOM05D006242 ORTHO05D007936 4.9e-85 318.2 208 75.0
Duzib248G1438 Durio zibethinus HOM05D006242 ORTHO05D007936 1.9e-84 316.2 209 72.7
Cpa.g.sc30.139 Carica papaya HOM05D006242 ORTHO05D007936 2.4e-84 315.8 208 73.6
GSVIVG01012122001 Vitis vinifera HOM05D006242 ORTHO05D007936 7.1e-84 314.3 209 75.6
Thecc.02G006000 Theobroma cacao HOM05D006242 ORTHO05D007936 1.2e-83 313.5 211 72.0
RcHm_v2.0_Chr5g0020621 Rosa chinensis HOM05D006242 ORTHO05D007936 1.6e-83 313.2 211 74.4
Actinidia22421 Actinidia chinensis HOM05D006242 ORTHO05D007936 2.7e-83 312.4 208 75.5
TWI38G1455 Tripterygium wilfordii HOM05D006242 ORTHO05D007936 6.0e-83 311.2 213 71.4
FAN25G2599 Fragaria x ananassa HOM05D006242 ORTHO05D007936 1.3e-82 310.1 211 73.9
FvH4_3g12650 Fragaria vesca HOM05D006242 ORTHO05D007936 1.7e-82 309.7 211 73.9
FAN21G1956 Fragaria x ananassa HOM05D006242 ORTHO05D007936 2.3e-82 309.3 211 73.5
PGSC0003DMG400014939 Solanum tuberosum HOM05D006242 ORTHO05D007936 2.3e-82 309.3 209 71.3
DCAR_007782 Daucus carota HOM05D006242 ORTHO05D007936 3.0e-82 308.9 209 70.8
Oeu058943.1 Olea europaea HOM05D006242 ORTHO05D007936 3.9e-82 308.5 225 68.4
Peaxi162Scf00198g01026 Petunia axillaris HOM05D006242 ORTHO05D007936 3.9e-82 308.5 207 72.0
Potri.001G159600 Populus trichocarpa HOM05D006242 ORTHO05D007936 5.1e-82 308.1 211 71.6
Lj1A1147G28 Lonicera japonica HOM05D006242 ORTHO05D007936 1.5e-81 306.6 216 71.3
CANSAT35G0032 Cannabis sativa HOM05D006242 ORTHO05D007936 1.9e-81 306.2 211 70.6
CAN.G79.44 Capsicum annuum HOM05D006242 ORTHO05D007936 1.9e-81 306.2 209 70.8
Hma1.2p1_1499F.1_g287250 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.9e-81 306.2 207 70.0
Solyc02g031980.3 Solanum lycopersicum HOM05D006242 ORTHO05D007936 2.5e-81 305.8 209 69.9
Sabra01G0132400 Salix brachista HOM05D006242 ORTHO05D007936 4.3e-81 305.1 211 71.1
Gohir.D12G047300 Gossypium hirsutum HOM05D006242 ORTHO05D007936 5.6e-81 304.7 209 69.4
Gorai.008G050000 Gossypium raimondii HOM05D006242 ORTHO05D007936 5.6e-81 304.7 209 69.4
MBI02_g26996_MAGBIO Magnolia biondii HOM05D006242 ORTHO05D007936 8.1e-80 300.8 209 70.8
Gohir.A12G048500 Gossypium hirsutum HOM05D006242 ORTHO05D007936 1.4e-79 300.1 209 67.9
Lj6g0025800 Lotus japonicus HOM05D006242 ORTHO05D007936 6.8e-79 297.7 211 69.2
Nitab4.5_0008021g0020 Nicotiana tabacum HOM05D006242 ORTHO05D007936 8.9e-79 297.4 226 66.8
TPR.G10622 Trifolium pratense HOM05D006242 ORTHO05D007936 2.0e-78 296.2 211 67.8
PSO541G0450 Papaver somniferum HOM05D006242 ORTHO05D007936 4.4e-78 295.0 209 69.4
Medtr1g050428 Medicago truncatula HOM05D006242 ORTHO05D007936 5.8e-78 294.7 211 67.8
Thhalv10017018m.g Eutrema salsugineum HOM05D006242 ORTHO05D007936 7.6e-78 294.3 209 69.9
Cc00_g22870 Coffea canephora HOM05D006242 ORTHO05D007936 2.9e-77 292.4 209 69.4
Ca_19722_v3 Cicer arietinum L. HOM05D006242 ORTHO05D007936 1.1e-76 290.4 211 66.4
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 3.2e-76 288.9 209 67.5
MSTRG.20044 Avicennia marina HOM05D006242 ORTHO05D007936 4.2e-76 288.5 211 66.8
PSO675G0930 Papaver somniferum HOM05D006242 ORTHO05D007936 4.2e-76 288.5 209 67.9
SGA_v2.0_scaffold51G18672 Striga asiatica HOM05D006242 ORTHO05D007936 5.4e-76 288.1 211 66.4
Lsat_1_v5_gn_6_96480 Lactuca sativa HOM05D006242 ORTHO05D007936 7.1e-76 287.7 210 70.5
THA.LOC104798560 Tarenaya hassleriana HOM05D006242 ORTHO05D007936 7.1e-76 287.7 212 67.0
Lalb_Chr19g0129141 Lupinus albus HOM05D006242 ORTHO05D007936 9.3e-76 287.3 210 67.1
ECA232G2813 Erigeron canadensis HOM05D006242 ORTHO05D007936 1.2e-75 287.0 208 69.2
Eucgr.B01565 Eucalyptus grandis HOM05D006242 ORTHO05D007936 1.2e-75 287.0 209 67.5
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 2.7e-75 285.8 207 69.6
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 2.7e-75 285.8 209 65.6
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 2.7e-75 285.8 209 65.6
FAN16G0457 Fragaria x ananassa HOM05D006242 ORTHO05D007936 2.7e-75 285.8 238 64.7
Carub.0004s1673 Capsella rubella HOM05D006242 ORTHO05D007936 3.5e-75 285.4 209 67.0
PGR004G2427 Punica granatum HOM05D006242 ORTHO05D007936 4.6e-75 285.0 210 69.0
HanXRQChr12g0381511 Helianthus annuus HOM05D006242 ORTHO05D007936 2.3e-74 282.7 208 68.8
Glyma.02G163900 Glycine max HOM05D006242 ORTHO05D007936 8.7e-74 280.8 206 66.0
Cc09_g05610 Coffea canephora HOM05D006242 ORTHO05D007936 1.1e-73 280.4 209 67.5
ClCG01G025640 Citrullus lanatus HOM05D006242 ORTHO05D007936 2.5e-73 279.3 211 68.2
CsaV3_6G052870 Cucumis sativus L. HOM05D006242 ORTHO05D007936 2.5e-73 279.3 211 68.7
MELO3C007020.2 Cucumis melo HOM05D006242 ORTHO05D007936 1.3e-72 276.9 211 67.8
AL4G31060 Arabidopsis lyrata HOM05D006242 ORTHO05D007936 2.8e-72 275.8 226 62.4
Nitab4.5_0000138g0120 Nicotiana tabacum HOM05D006242 ORTHO05D007936 2.8e-72 275.8 215 65.6
BcaC02g11584 Brassica carinata HOM05D006242 ORTHO05D007936 3.6e-72 275.4 208 64.9
CARHR129200 Cardamine hirsuta HOM05D006242 ORTHO05D007936 6.2e-72 274.6 198 67.2
HanXRQChr12g0369481 Helianthus annuus HOM05D006242 ORTHO05D007936 6.2e-72 274.6 208 66.8
Cc09_g05740 Coffea canephora HOM05D006242 ORTHO05D007936 1.1e-71 273.9 213 67.1
EL10Ac7g16757 Beta vulgaris HOM05D006242 ORTHO05D007936 1.2e-70 270.4 209 62.7
Migut.K01175 Erythranthe guttata HOM05D006242 ORTHO05D007936 4.4e-70 268.5 209 63.2
COL.COLO4_17635 Corchorus olitorius HOM05D006242 ORTHO05D007936 2.2e-69 266.2 173 73.4
SalBow7G3063 Salvia bowleyana HOM05D006242 ORTHO05D007936 2.2e-69 266.2 213 63.4
Sed0024740 Sechium edule HOM05D006242 ORTHO05D007936 7.1e-68 261.2 214 62.1
Ciclev10016161m.g Citrus clementina HOM05D006242 ORTHO05D007936 1.3e-66 256.9 179 70.4
TAR624G0344 Trochodendron aralioides HOM05D006242 ORTHO05D007936 2.5e-65 252.7 186 67.7
CDE05G0364 Ceratophyllum demersum HOM05D006242 ORTHO05D007936 9.6e-65 250.8 211 59.7
Zm00001eb233240 Zea mays HOM05D006242 ORTHO05D007936 1.8e-63 246.5 209 58.4
Psat6g094920 Pisum sativum HOM05D006242 ORTHO05D007936 3.1e-63 245.7 180 66.7
Sc17g0004220 Simmondsia chinensis HOM05D006242 ORTHO05D007936 2.4e-60 236.1 171 67.3
SEGI_06259 Sequoiadendron giganteum HOM05D006242 ORTHO05D007936 7.1e-60 234.6 212 57.5
Sp2g07040 Schrenkiella parvula HOM05D006242 ORTHO05D007936 9.3e-60 234.2 192 60.9
arahy.Tifrunner.gnm1.ann1.VZGM4G Arachis hypogaea HOM05D006242 ORTHO05D007936 7.9e-59 231.1 173 65.3
SpUn0157_0010 Schrenkiella parvula HOM05D006242 ORTHO05D007936 1.5e-57 226.9 189 60.8
Hma1.2p1_1700F.1_g298210 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 5.3e-55 218.4 154 68.8
arahy.Tifrunner.gnm1.ann1.PA3R73 Arachis hypogaea HOM05D006242 ORTHO05D007936 1.2e-54 217.2 199 57.3
Cc09_g05660 Coffea canephora HOM05D006242 ORTHO05D007936 1.5e-54 216.9 145 71.7
ATR1094G001 Amborella trichopoda HOM05D006242 ORTHO05D007936 6.5e-53 211.5 208 52.4
AT2G35035 Arabidopsis thaliana HOM05D006242 ORTHO05D007936 1.0e-45 187.6 145 65.5
Hma1.2p1_1499F.1_g287260 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.4e-44 183.7 115 71.3
Sopen02g010240 Solanum pennellii HOM05D006242 ORTHO05D007936 2.5e-44 183.0 117 72.6
Lj6g0012918 Lotus japonicus HOM05D006242 ORTHO05D007936 3.2e-44 182.6 117 73.5
Mapoly0026s0041 Marchantia polymorpha HOM05D006242 ORTHO05D007936 3.2e-44 182.6 209 45.0
SMO203G0088 Selaginella moellendorffii HOM05D006242 ORTHO05D007936 9.7e-41 171.0 207 43.0
AagrBONN_evm.TU.Sc2ySwM_228.1028 Anthoceros agrestis HOM05D006242 ORTHO05D007936 5.3e-39 165.2 212 40.6
Pp3c12_18460 Physcomitrium patens HOM05D006242 ORTHO05D007936 6.9e-39 164.9 223 40.8
Phvul.007G242500 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 6.5e-37 158.3 92 78.3
Nn7g38280 Nelumbo nucifera HOM05D006242 ORTHO05D007936 3.2e-36 156.0 120 66.7
VMungo0720G1734 Vigna mungo HOM05D006242 ORTHO05D007936 3.2e-36 156.0 91 79.1
Cc09_g05680 Coffea canephora HOM05D006242 ORTHO05D007936 2.0e-33 146.7 93 73.1
Cc09_g05630 Coffea canephora HOM05D006242 ORTHO05D007936 2.5e-33 146.4 147 55.1
BraA05t20007Z Brassica rapa HOM05D003281 ORTHO05D004128 7.4e-33 144.8 125 58.4
AUR62040160 Chenopodium quinoa HOM05D006242 ORTHO05D007936 1.8e-31 140.2 101 62.4
Phvul.007G242466 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 1.7e-29 133.7 108 64.8
CiPaw.09G216300 Carya illinoinensis HOM05D006242 ORTHO05D007936 1.9e-28 130.2 72 91.7
unitig_37.g12020 Utricularia gibba HOM05D006242 ORTHO05D007936 2.5e-28 129.8 93 61.3
Glyma.20G074000 Glycine max HOM05D006242 ORTHO05D007936 5.1e-26 122.1 123 52.0
CBR_g46754 Chara braunii HOM05D006242 ORTHO05D007936 6.7e-26 121.7 137 40.9
VMungo0720G2601 Vigna mungo HOM05D006242 ORTHO05D007936 5.7e-25 118.6 97 64.9
BcaB02g09486 Brassica carinata HOM05D006242 ORTHO05D007936 3.1e-23 112.8 98 56.1
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 1.5e-22 110.5 238 31.1
HPP92_011012 Vanilla planifolia HOM05D006242 ORTHO05D007936 1.0e-21 107.8 123 45.5
AUR62040161 Chenopodium quinoa HOM05D006242 ORTHO05D007936 9.7e-17 91.3 90 51.1
Cc09_g05710 Coffea canephora HOM05D006242 ORTHO05D007936 2.6e-14 83.2 59 66.1
Hund15669 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.1e-11 72.0 65 55.4
HPP92_011011 Vanilla planifolia HOM05D006242 ORTHO05D007936 1.4e-07 60.8 39 69.2
MCO04G402 Micromonas commoda HOM05D006242 ORTHO05D007936 3.1e-07 59.7 57 43.9


User provided reference genes

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