Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 2.8e-67 258.8 166 100.0
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 3.0e-53 212.2 166 86.7
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 2.5e-52 209.1 166 75.9
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 7.3e-44 181.0 168 66.7
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 7.1e-39 164.5 167 64.1
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 9.3e-39 164.1 169 63.3
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 6.0e-38 161.4 169 62.7
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 1.3e-37 160.2 169 63.3
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 3.0e-37 159.1 148 66.2
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 6.7e-37 157.9 164 64.0
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 1.9e-36 156.4 166 61.4
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 3.3e-36 155.6 164 62.8
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 4.3e-36 155.2 164 64.0
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 7.4e-36 154.5 164 63.4
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 9.6e-36 154.1 166 61.4
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 1.3e-35 153.7 165 62.4
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.6e-35 153.3 166 62.7
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.6e-35 153.3 142 68.3
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 1.6e-35 153.3 142 68.3
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 3.7e-35 152.1 166 62.0
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 3.7e-35 152.1 166 62.0
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 6.2e-35 151.4 169 61.5
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 1.4e-34 150.2 166 60.8
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 1.4e-34 150.2 169 60.4
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 3.1e-34 149.1 162 59.9
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 4.0e-34 148.7 166 61.4
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 9.0e-34 147.5 166 62.0
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 2.0e-33 146.4 166 60.2
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 2.0e-33 146.4 167 59.9
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 2.0e-33 146.4 162 56.8
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 3.4e-33 145.6 153 62.1
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 1.3e-32 143.7 167 59.9
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 1.9e-31 139.8 167 59.3
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 1.9e-31 139.8 167 59.3
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 2.5e-31 139.4 196 49.5
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 3.2e-31 139.0 167 59.3
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 5.5e-31 138.3 170 58.8
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 5.5e-31 138.3 166 60.2
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 5.5e-31 138.3 145 59.3
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 7.1e-31 137.9 166 57.8
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 1.2e-30 137.1 142 58.5
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 1.6e-30 136.7 167 58.7
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 2.1e-30 136.3 169 56.2
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 4.6e-30 135.2 138 65.2
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 6.0e-30 134.8 165 57.6
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 6.0e-30 134.8 166 56.0
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 7.9e-30 134.4 169 55.0
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 1.3e-29 133.7 145 57.9
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 2.3e-29 132.9 167 56.9
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 3.9e-29 132.1 167 56.3
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 1.1e-28 130.6 158 54.4
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 7.4e-28 127.9 142 59.9
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 7.4e-28 127.9 112 67.0
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 1.3e-27 127.1 167 53.9
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 2.8e-27 125.9 167 53.9
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 3.7e-27 125.6 139 62.6
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 6.2e-27 124.8 164 54.9
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 3.1e-26 122.5 169 53.3
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 3.1e-26 122.5 147 56.5
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 4.0e-26 122.1 158 61.4
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 4.0e-26 122.1 143 54.5
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 4.0e-26 122.1 168 57.1
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 9.0e-26 120.9 145 55.2
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 9.0e-26 120.9 145 55.2
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 1.2e-25 120.6 172 52.9
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 1.2e-25 120.6 169 53.3
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 1.2e-25 120.6 145 55.2
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 1.2e-25 120.6 155 54.2
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 1.5e-25 120.2 172 52.3
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 1.5e-25 120.2 169 53.3
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 1.5e-25 120.2 163 54.0
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 1.5e-25 120.2 169 53.3
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 1.5e-25 120.2 169 52.7
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 2.0e-25 119.8 167 52.1
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 2.0e-25 119.8 167 52.1
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 4.5e-25 118.6 114 64.0
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 5.8e-25 118.2 142 55.6
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 5.8e-25 118.2 146 58.2
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 7.6e-25 117.9 171 52.6
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 1.0e-24 117.5 136 57.4
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 1.0e-24 117.5 168 51.8
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 1.0e-24 117.5 171 52.6
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 1.0e-24 117.5 171 52.6
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 1.0e-24 117.5 143 58.0
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 1.3e-24 117.1 169 52.7
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 1.3e-24 117.1 147 55.1
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 1.3e-24 117.1 72 87.5
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 1.7e-24 116.7 156 55.1
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 1.7e-24 116.7 143 53.1
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 2.2e-24 116.3 173 50.3
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 2.9e-24 115.9 142 57.0
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 2.9e-24 115.9 142 57.0
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 2.9e-24 115.9 142 57.0
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 8.4e-24 114.4 174 52.3
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 1.1e-23 114.0 128 57.8
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 3.2e-23 112.5 142 54.2
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 4.2e-23 112.1 127 61.4
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 5.5e-23 111.7 140 54.3
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 7.1e-23 111.3 140 51.4
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 9.3e-23 110.9 73 82.2
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 1.6e-22 110.2 136 58.1
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 2.1e-22 109.8 166 56.6
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 1.3e-21 107.1 132 53.8
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 2.3e-21 106.3 150 49.3
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 3.9e-21 105.5 148 54.7
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 6.7e-21 104.8 74 78.4
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 1.1e-20 104.0 74 75.7
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 1.9e-20 103.2 143 52.4
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 3.3e-20 102.4 66 83.3
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 5.7e-20 101.7 67 77.6
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 2.2e-19 99.8 143 51.7
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 2.8e-19 99.4 112 62.5
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 4.8e-19 98.6 163 47.9
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 4.8e-19 98.6 70 77.1
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 6.3e-19 98.2 67 76.1
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 1.4e-18 97.1 75 72.0
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 5.3e-18 95.1 72 75.0
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 5.3e-18 95.1 72 75.0
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 5.0e-16 88.6 143 49.7
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 1.9e-15 86.7 128 50.0
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 3.9e-13 79.0 59 76.3
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 1.3e-11 73.9 70 64.3
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 1.7e-11 73.6 70 61.4
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 1.7e-11 73.6 70 64.3
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 6.3e-11 71.6 67 65.7
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 1.8e-10 70.1 67 62.7
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 1.5e-09 67.0 70 62.9
Nn3g19836 Nelumbo nucifera HOM05D005954 ORTHO05D007347 8.5e-08 61.2 46 73.9


User provided reference genes

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