Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 2.6e-53 211.8 113 100.0
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 4.5e-37 157.9 103 79.6
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 2.9e-36 155.2 107 77.6
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 8.5e-36 153.7 106 77.4
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 8.5e-36 153.7 103 79.6
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 1.5e-35 152.9 114 74.6
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.5e-35 152.9 114 74.6
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 1.9e-35 152.5 108 74.1
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 2.5e-35 152.1 110 71.8
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.5e-35 152.1 104 78.8
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 2.5e-35 152.1 103 77.7
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 3.2e-35 151.8 103 77.7
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 3.2e-35 151.8 93 86.0
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 4.2e-35 151.4 113 69.9
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 4.2e-35 151.4 113 70.8
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 4.2e-35 151.4 113 70.8
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 5.5e-35 151.0 103 73.8
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 1.2e-34 149.8 106 75.5
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 1.2e-34 149.8 112 75.0
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 3.6e-34 148.3 113 71.7
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 3.6e-34 148.3 103 73.8
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 3.6e-34 148.3 103 75.7
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 4.7e-34 147.9 108 71.3
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 1.0e-33 146.7 103 72.8
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 1.8e-33 146.0 103 70.9
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 3.0e-33 145.2 113 68.1
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 5.2e-33 144.4 113 69.9
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 6.8e-33 144.1 99 72.7
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 6.8e-33 144.1 112 71.4
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 8.8e-33 143.7 103 73.8
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 2.6e-32 142.1 103 70.9
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 3.4e-32 141.7 82 91.5
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 5.7e-32 141.0 112 72.3
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 7.5e-32 140.6 108 72.2
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 9.8e-32 140.2 113 68.1
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 1.3e-31 139.8 113 66.4
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 1.3e-31 139.8 110 70.0
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 4.9e-31 137.9 105 69.5
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 4.9e-31 137.9 106 71.7
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 6.3e-31 137.5 110 69.1
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 6.3e-31 137.5 113 68.1
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 8.3e-31 137.1 103 70.9
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 1.1e-30 136.7 105 68.6
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 1.1e-30 136.7 101 74.3
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 1.4e-30 136.3 105 68.6
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 1.4e-30 136.3 110 68.2
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.8e-30 136.0 110 68.2
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 4.1e-30 134.8 101 73.3
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 5.4e-30 134.4 99 72.7
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 5.4e-30 134.4 96 75.0
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 9.2e-30 133.7 104 70.2
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.6e-29 132.9 100 71.0
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 5.9e-29 131.0 113 63.7
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 5.9e-29 131.0 110 64.5
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 1.0e-28 130.2 106 62.3
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 2.3e-28 129.0 107 67.3
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 2.3e-28 129.0 110 66.4
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 2.3e-28 129.0 108 63.9
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 2.9e-28 128.6 106 64.2
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 3.8e-28 128.3 106 67.9
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 5.0e-28 127.9 113 64.6
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 5.0e-28 127.9 109 63.3
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 8.6e-28 127.1 95 71.6
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 8.6e-28 127.1 112 63.4
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 1.1e-27 126.7 101 64.4
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 1.9e-27 125.9 93 66.7
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 1.9e-27 125.9 111 62.2
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 2.5e-27 125.6 95 67.4
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 2.5e-27 125.6 110 63.6
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 2.5e-27 125.6 105 62.9
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 9.5e-27 123.6 103 62.1
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 1.6e-26 122.9 93 65.6
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 2.1e-26 122.5 103 61.2
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 2.1e-26 122.5 80 80.0
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 1.0e-25 120.2 106 58.5
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 1.8e-25 119.4 145 53.8
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 5.2e-25 117.9 110 57.3
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 2.6e-24 115.5 101 63.4
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 3.4e-24 115.2 113 59.3
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 4.4e-24 114.8 91 62.6
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 4.4e-24 114.8 91 62.6
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 4.4e-24 114.8 115 55.7
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 9.8e-24 113.6 91 61.5
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 9.8e-24 113.6 91 61.5
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 4.1e-22 108.2 129 48.8
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 2.7e-21 105.5 80 73.8
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 2.7e-21 105.5 83 71.1
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 1.0e-20 103.6 95 62.1
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 2.3e-20 102.4 109 51.4
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 2.3e-20 102.4 102 52.9
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 6.6e-20 100.9 99 57.6
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 8.6e-20 100.5 105 55.2
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 2.1e-18 95.9 83 66.3
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 8.0e-18 94.0 105 49.5
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 1.8e-17 92.8 82 58.5
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 5.2e-17 91.3 60 78.3
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 8.9e-17 90.5 63 77.8
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 5.8e-16 87.8 101 46.5
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 1.4e-14 83.2 98 50.0
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 7.8e-13 77.4 110 43.6
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 7.8e-13 77.4 91 46.2
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 6.2e-10 67.8 88 45.5
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 3.4e-08 62.0 102 41.2
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 3.7e-07 58.5 65 49.2


User provided reference genes

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