Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 5.6e-159 564.3 303 100.0
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 1.5e-140 503.1 303 84.8
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 7.6e-140 500.7 302 84.8
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 1.3e-134 483.4 280 85.4
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.2e-132 476.9 283 85.2
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 5.9e-132 474.6 281 84.0
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 5.0e-131 471.5 290 81.4
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 4.2e-130 468.4 283 82.3
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 4.2e-130 468.4 281 80.4
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 9.4e-130 467.2 281 84.0
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 9.4e-130 467.2 280 83.2
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 1.6e-129 466.5 281 82.6
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.6e-129 466.5 281 81.9
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 2.1e-129 466.1 281 82.6
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 2.7e-129 465.7 281 81.1
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 6.1e-129 464.5 281 82.6
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 1.0e-128 463.8 281 81.9
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 1.8e-128 463.0 281 81.9
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 3.0e-128 462.2 279 82.4
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.9e-128 461.8 281 82.2
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 3.9e-128 461.8 281 82.2
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 8.8e-128 460.7 282 79.8
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 8.8e-128 460.7 282 79.8
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 8.8e-128 460.7 280 82.5
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 2.0e-127 459.5 281 81.1
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 2.6e-127 459.1 281 82.2
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 2.6e-127 459.1 281 82.6
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 2.6e-127 459.1 281 81.5
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 3.3e-127 458.8 281 82.6
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 4.4e-127 458.4 300 77.0
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 5.7e-127 458.0 281 81.9
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 5.7e-127 458.0 279 80.3
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 7.4e-127 457.6 281 80.8
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 7.4e-127 457.6 281 80.4
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 7.4e-127 457.6 281 81.5
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 9.7e-127 457.2 303 76.2
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 1.3e-126 456.8 280 81.4
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 1.7e-126 456.4 281 79.7
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 1.7e-126 456.4 281 80.8
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 1.7e-126 456.4 281 81.1
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 2.2e-126 456.1 281 80.1
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 2.2e-126 456.1 281 80.1
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 2.8e-126 455.7 282 81.6
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 3.7e-126 455.3 281 80.8
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 3.7e-126 455.3 280 81.4
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 3.7e-126 455.3 281 79.7
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 4.8e-126 454.9 280 81.1
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 4.8e-126 454.9 281 80.8
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 6.3e-126 454.5 281 79.7
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 6.3e-126 454.5 279 80.6
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 6.3e-126 454.5 281 79.4
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 8.2e-126 454.1 281 79.4
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 8.2e-126 454.1 281 81.5
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 8.2e-126 454.1 281 80.1
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 8.2e-126 454.1 279 80.3
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 1.1e-125 453.8 280 81.4
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 1.1e-125 453.8 279 79.9
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 1.1e-125 453.8 279 79.9
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 1.1e-125 453.8 279 79.9
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 1.1e-125 453.8 279 79.9
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 1.1e-125 453.8 279 79.9
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.1e-125 453.8 281 80.1
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.1e-125 453.8 278 81.3
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.4e-125 453.4 281 80.1
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 1.4e-125 453.4 281 80.1
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 1.8e-125 453.0 281 79.7
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 5.3e-125 451.4 279 79.2
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 6.9e-125 451.1 281 79.7
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 9.1e-125 450.7 279 79.9
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 1.2e-124 450.3 281 79.0
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 2.0e-124 449.5 281 79.4
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 2.0e-124 449.5 281 78.3
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 2.6e-124 449.1 281 79.4
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 2.6e-124 449.1 281 79.7
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 3.4e-124 448.7 281 79.7
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.4e-124 448.7 281 79.4
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 3.4e-124 448.7 270 81.1
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 4.5e-124 448.4 281 80.1
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 4.5e-124 448.4 282 81.2
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 5.9e-124 448.0 280 79.6
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 7.7e-124 447.6 281 79.0
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 7.7e-124 447.6 281 80.8
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 1.0e-123 447.2 281 77.2
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 1.0e-123 447.2 279 80.6
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.0e-123 447.2 280 78.9
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 1.3e-123 446.8 303 81.5
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 2.9e-123 445.7 280 78.6
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 3.8e-123 445.3 280 78.9
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 5.0e-123 444.9 281 78.3
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 6.5e-123 444.5 281 78.3
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 1.1e-122 443.7 280 78.6
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.1e-122 443.7 281 78.3
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 1.9e-122 443.0 267 82.4
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 1.9e-122 443.0 281 78.3
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 2.5e-122 442.6 275 78.9
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 2.5e-122 442.6 280 78.6
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 3.2e-122 442.2 268 82.1
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 3.2e-122 442.2 283 79.5
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 4.2e-122 441.8 275 79.3
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 4.2e-122 441.8 274 80.3
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 7.2e-122 441.0 281 77.2
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 1.2e-121 440.3 281 77.2
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 1.6e-121 439.9 303 74.6
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 2.1e-121 439.5 281 78.6
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 7.9e-121 437.6 280 78.9
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 2.3e-120 436.0 279 77.4
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 3.9e-120 435.3 280 78.2
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 2.0e-119 433.0 281 75.1
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 9.7e-119 430.6 277 76.5
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 3.1e-117 425.6 250 85.2
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 1.2e-116 423.7 308 71.1
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 1.6e-116 423.3 255 80.8
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 2.6e-116 422.5 278 77.7
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 1.3e-115 420.2 286 73.4
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.2e-115 419.5 252 81.3
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 2.5e-114 416.0 281 74.4
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 2.5e-114 416.0 280 74.3
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 3.2e-114 415.6 294 72.8
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 4.2e-114 415.2 281 76.5
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 6.1e-113 411.4 280 74.3
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 7.5e-111 404.4 363 62.5
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 9.7e-111 404.1 263 76.4
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 1.8e-109 399.8 221 86.4
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 1.7e-107 393.3 250 75.2
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 5.0e-107 391.7 251 77.3
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 6.5e-107 391.3 274 68.2
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 1.9e-106 389.8 221 86.0
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 9.4e-106 387.5 253 74.7
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 1.6e-105 386.7 273 69.6
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 1.0e-104 384.0 272 71.3
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 5.2e-104 381.7 263 73.0
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 7.5e-103 377.9 218 84.9
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 7.5e-103 377.9 218 84.9
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 4.1e-101 372.1 200 91.0
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 1.5e-95 353.6 289 62.3
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.0e-92 343.2 287 64.1
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 1.9e-90 336.7 215 79.1
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 8.0e-89 331.3 218 74.8
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 5.7e-87 325.1 182 85.7
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 1.7e-86 323.6 182 86.8
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 3.3e-82 309.3 208 75.0
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 4.9e-78 295.4 174 82.8
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 1.4e-72 277.3 221 70.1
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 3.7e-70 269.2 179 76.0
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 1.1e-69 267.7 152 84.9
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 1.2e-65 254.2 194 66.5
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.3e-62 244.2 146 81.5
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 3.4e-55 219.5 209 59.3
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 5.3e-48 195.7 158 65.2
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 2.0e-47 193.7 136 74.3
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 7.1e-45 185.3 236 45.8
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 3.5e-44 183.0 119 69.7
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 6.2e-41 172.2 177 56.5
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 1.7e-38 164.1 105 71.4
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 3.0e-35 153.3 86 83.7
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 2.8e-33 146.7 96 69.8
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 2.2e-30 137.1 305 32.5
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 7.1e-29 132.1 93 72.0
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 1.8e-27 127.5 170 44.7
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 1.4e-24 117.9 191 42.9
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 1.8e-24 117.5 69 82.6
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 3.1e-24 116.7 66 84.8
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 6.1e-20 102.4 80 66.2
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 1.1e-16 91.7 158 39.2
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-15 86.7 85 54.1
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 5.5e-13 79.3 53 69.8
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 3.6e-12 76.6 79 50.6
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 1.0e-11 75.1 92 46.7
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 2.6e-10 70.5 63 61.9
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 2.6e-10 70.5 63 61.9
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 9.7e-10 68.6 110 39.1
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 3.7e-09 66.6 102 39.2
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.1e-08 65.1 63 57.1
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 3.1e-08 63.5 43 74.4
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 4.1e-08 63.2 56 60.7
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 1.2e-07 61.6 40 75.0
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.5e-07 61.2 34 79.4
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 1.7e-06 57.8 55 60.0
MCO17G054 Micromonas commoda HOM05D003815 ORTHO05D270498 1.7e-06 57.8 142 31.0
Actinidia37470 Actinidia chinensis HOM05D003815 ORTHO05D004218 2.9e-06 57.0 35 74.3
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 5.0e-06 56.2 57 47.4
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 8.5e-06 55.5 38 71.1


User provided reference genes

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