Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 2.4e-195 685.3 326 100.0
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 4.8e-180 634.4 325 91.7
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 3.2e-176 621.7 326 90.2
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 2.5e-173 612.1 319 89.7
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 1.3e-172 609.8 322 87.6
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 1.3e-172 609.8 325 88.0
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 2.8e-172 608.6 329 86.9
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 3.7e-172 608.2 327 87.8
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 4.8e-172 607.8 323 87.3
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 8.1e-172 607.1 325 86.5
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 1.4e-171 606.3 329 86.3
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 1.2e-170 603.2 325 86.8
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 1.5e-170 602.8 321 86.3
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 5.8e-170 600.9 321 86.3
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 5.8e-170 600.9 321 86.3
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 5.8e-170 600.9 329 86.3
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.3e-169 599.7 329 86.3
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 1.7e-169 599.4 320 86.2
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.2e-169 599.0 329 86.0
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 2.9e-169 598.6 325 87.1
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 3.8e-169 598.2 320 86.6
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 3.8e-169 598.2 315 88.3
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 6.5e-169 597.4 325 86.2
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 6.5e-169 597.4 325 86.2
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.1e-168 596.7 323 85.1
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.1e-168 596.7 329 85.7
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 1.1e-168 596.7 330 84.2
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 1.1e-168 596.7 321 86.9
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.4e-168 596.3 325 86.2
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.4e-168 596.3 323 85.1
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.4e-168 596.3 318 86.5
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 2.5e-168 595.5 314 87.9
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 2.5e-168 595.5 319 86.8
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 3.2e-168 595.1 310 87.4
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.2e-168 594.7 322 85.4
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.2e-167 593.2 320 85.3
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 1.2e-167 593.2 329 85.1
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.6e-167 592.8 322 85.4
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 2.1e-167 592.4 384 76.0
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 2.1e-167 592.4 326 83.1
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 2.7e-167 592.0 319 86.2
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.7e-167 592.0 329 85.7
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 2.7e-167 592.0 329 85.1
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 3.5e-167 591.7 330 83.6
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 3.5e-167 591.7 329 85.1
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 4.6e-167 591.3 323 84.5
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 4.6e-167 591.3 321 84.7
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 6.0e-167 590.9 332 84.9
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 7.9e-167 590.5 321 86.6
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 7.9e-167 590.5 321 86.3
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.0e-166 590.1 319 86.8
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 1.8e-166 589.3 328 84.1
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 2.3e-166 589.0 326 82.8
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 2.3e-166 589.0 321 84.1
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 6.7e-166 587.4 314 87.3
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 8.7e-166 587.0 317 84.5
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 8.7e-166 587.0 317 84.5
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 1.5e-165 586.3 323 84.5
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 3.3e-165 585.1 317 83.9
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 3.3e-165 585.1 317 83.9
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 9.6e-165 583.6 323 84.2
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 9.6e-165 583.6 321 82.2
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.6e-164 582.8 315 87.0
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 1.6e-164 582.8 326 82.8
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 1.6e-164 582.8 308 87.0
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 2.1e-164 582.4 328 83.2
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 2.8e-164 582.0 319 83.7
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 4.8e-164 581.3 326 82.8
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 4.8e-164 581.3 313 84.7
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 6.3e-164 580.9 323 83.6
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 6.3e-164 580.9 323 83.6
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 6.3e-164 580.9 326 82.8
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 8.2e-164 580.5 321 84.4
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 1.1e-163 580.1 304 89.5
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 1.4e-163 579.7 321 82.9
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 1.4e-163 579.7 324 82.7
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 2.4e-163 578.9 321 82.6
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 3.1e-163 578.6 324 83.0
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 3.1e-163 578.6 316 83.9
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 6.9e-163 577.4 316 84.5
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 1.5e-162 576.2 322 83.5
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 2.6e-162 575.5 323 83.0
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 2.6e-162 575.5 323 83.0
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 2.6e-162 575.5 321 84.1
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 1.0e-161 573.5 325 82.5
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 3.8e-161 571.6 325 82.2
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 5.0e-161 571.2 318 84.3
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 8.5e-161 570.5 326 81.0
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 8.5e-161 570.5 330 80.9
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 8.5e-161 570.5 322 82.3
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 1.4e-160 569.7 318 83.0
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 1.9e-160 569.3 329 81.2
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 3.6e-159 565.1 314 83.1
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 1.8e-158 562.8 327 81.0
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 2.3e-158 562.4 326 80.7
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 5.7e-157 557.8 322 79.8
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 2.4e-155 552.4 319 78.4
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 3.1e-155 552.0 338 76.9
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 1.2e-154 550.1 317 79.8
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 4.5e-154 548.1 327 77.1
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 5.9e-154 547.7 317 79.8
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 6.5e-153 544.3 323 78.6
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 1.4e-152 543.1 321 78.8
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 4.2e-152 541.6 321 78.5
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.4e-147 526.6 279 87.1
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 2.4e-147 525.8 299 80.6
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 1.3e-145 520.0 308 76.6
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.9e-145 518.8 305 81.0
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 3.8e-145 518.5 308 76.3
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 8.5e-145 517.3 319 75.2
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 6.1e-143 511.1 295 78.3
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 3.7e-140 501.9 273 86.8
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 3.2e-136 488.8 268 84.3
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 3.6e-135 485.3 338 68.9
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 4.0e-134 481.9 316 69.3
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 9.1e-131 470.7 308 68.2
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 2.9e-129 465.7 309 67.6
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 3.2e-128 462.2 251 84.9
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 4.2e-128 461.8 309 67.6
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 4.2e-128 461.8 309 67.6
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 3.1e-115 419.1 311 60.1
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 7.8e-114 414.5 229 85.2
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 3.3e-104 382.5 315 58.4
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 1.9e-99 366.7 244 69.7
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 2.6e-93 346.3 215 74.4
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 6.0e-90 335.1 315 51.1
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 7.1e-83 311.6 345 46.1
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 1.1e-72 277.7 360 41.4
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 8.4e-60 235.0 123 83.7
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 1.3e-31 141.4 82 80.5
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 7.7e-29 132.1 89 71.9
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.1e-22 111.7 84 69.0
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 2.2e-20 104.0 68 72.1
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 2.8e-15 87.0 52 75.0
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 7.0e-14 82.4 42 81.0
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 4.5e-13 79.7 41 80.5
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 1.5e-11 74.7 52 67.3
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 1.3e-07 61.6 42 59.5


User provided reference genes

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