Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 8.8e-254 879.8 440 100.0
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 2.0e-218 762.3 445 84.9
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 2.7e-218 761.9 445 84.9
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 3.1e-206 721.8 442 81.9
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 1.3e-204 716.5 437 81.0
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 2.2e-204 715.7 438 80.4
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 3.7e-204 714.9 441 79.8
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.9e-203 712.6 441 78.5
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 4.1e-203 711.4 441 79.8
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 1.7e-201 706.1 448 79.9
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 3.0e-201 705.3 435 79.3
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 6.6e-201 704.1 443 77.7
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 8.6e-201 703.7 442 78.1
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 1.1e-200 703.4 443 79.7
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 4.3e-200 701.4 440 79.3
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 2.1e-199 699.1 440 78.9
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 6.2e-199 697.6 434 79.5
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 6.2e-199 697.6 442 77.6
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 8.1e-199 697.2 434 78.8
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 2.4e-198 695.7 438 78.3
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 5.2e-198 694.5 436 78.0
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 6.8e-198 694.1 464 76.1
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 1.5e-197 693.0 441 76.4
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 2.6e-197 692.2 436 79.1
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 2.6e-197 692.2 428 79.0
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 9.9e-197 690.3 448 77.5
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 9.9e-197 690.3 442 78.7
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 3.8e-196 688.3 439 78.6
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 8.4e-196 687.2 434 79.3
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 2.4e-195 685.6 441 76.6
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 3.2e-195 685.3 444 77.5
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 9.2e-195 683.7 439 78.4
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 3.5e-194 681.8 435 78.9
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 4.6e-194 681.4 439 77.9
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 1.3e-193 679.9 437 78.0
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 3.0e-193 678.7 430 78.8
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 2.5e-192 675.6 434 78.3
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 4.3e-192 674.9 441 78.0
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 1.6e-191 672.9 433 76.7
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 3.6e-191 671.8 428 77.6
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 6.2e-191 671.0 428 77.6
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.1e-190 668.7 441 74.1
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 6.9e-190 667.5 440 77.5
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 6.9e-190 667.5 437 77.1
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.2e-189 666.8 439 74.3
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 2.0e-189 666.0 439 75.2
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 9.9e-189 663.7 435 77.5
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 9.9e-189 663.7 443 77.0
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.9e-187 659.4 434 74.2
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 1.9e-187 659.4 437 76.2
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 4.2e-187 658.3 442 74.0
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 4.2e-187 658.3 445 73.7
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 5.4e-187 657.9 461 73.1
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 2.7e-186 655.6 443 73.4
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 7.8e-186 654.1 439 75.2
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 3.3e-184 648.7 435 74.3
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 1.6e-183 646.4 437 73.0
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 3.6e-183 645.2 440 74.1
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 3.6e-183 645.2 443 72.5
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 6.2e-183 644.4 435 73.8
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 5.3e-182 641.3 438 72.6
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 9.0e-182 640.6 444 73.9
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 1.3e-180 636.7 440 72.0
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.1e-179 633.6 448 73.0
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 1.3e-177 626.7 441 72.1
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 1.1e-176 623.6 498 65.9
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 7.4e-176 620.9 446 70.6
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 1.3e-175 620.2 443 70.9
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.3e-175 620.2 443 67.7
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 2.1e-175 619.4 440 71.1
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 3.7e-175 618.6 430 72.3
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 3.7e-175 618.6 442 70.4
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 4.8e-175 618.2 442 70.8
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 9.9e-173 610.5 445 69.4
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 2.2e-172 609.4 440 70.5
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 6.0e-170 601.3 433 70.4
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 6.0e-170 601.3 433 70.4
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 2.3e-169 599.4 433 70.2
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 2.3e-169 599.4 433 70.2
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 1.5e-168 596.7 445 67.6
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 9.6e-168 594.0 445 68.8
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 3.7e-167 592.0 430 69.5
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 3.1e-166 589.0 432 68.1
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 6.9e-166 587.8 437 68.4
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 3.4e-165 585.5 341 85.3
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.4e-163 580.1 431 69.1
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 2.1e-162 576.2 445 64.9
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 4.6e-162 575.1 366 76.8
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.5e-160 570.1 447 66.9
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 1.9e-160 569.7 432 65.5
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 3.3e-160 568.9 450 64.7
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 4.1e-158 562.0 386 73.6
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 1.0e-156 557.4 442 65.2
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 5.0e-156 555.1 453 63.6
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 6.5e-156 554.7 433 64.9
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 3.6e-154 548.9 445 63.6
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 2.5e-152 542.7 348 78.2
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 2.8e-151 539.3 440 64.1
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 3.2e-147 525.8 344 75.6
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 4.8e-143 511.9 439 59.9
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 6.5e-140 501.5 380 69.7
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 5.5e-139 498.4 437 61.6
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.0e-133 479.9 359 68.8
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 7.2e-131 471.5 446 57.8
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 1.6e-130 470.3 608 45.9
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 1.5e-128 463.8 439 51.9
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 3.1e-126 456.1 437 52.6
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 4.1e-126 455.7 296 78.0
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 1.0e-124 451.1 328 69.8
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 1.6e-122 443.7 444 50.9
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 7.5e-120 434.9 432 51.6
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.2e-95 353.6 208 82.7
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.5e-91 340.9 316 53.8
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 8.9e-89 331.6 276 65.2
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 4.4e-88 329.3 451 41.2
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.7e-76 290.8 333 49.2
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 8.1e-74 282.0 212 64.2
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.3e-51 206.8 161 62.7
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 1.0e-44 185.3 419 32.9
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-41 174.9 205 50.2
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 3.3e-35 153.7 119 63.9
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 3.3e-35 153.7 102 71.6
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 2.5e-22 110.9 113 47.8
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 3.6e-21 107.1 91 58.2
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 2.8e-18 97.4 62 72.6
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 3.7e-18 97.1 99 46.5
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.5e-11 75.1 126 38.1
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 7.5e-11 72.8 64 51.6
FAN09G2993 Fragaria x ananassa HOM05D006332 ORTHO05D210550 2.8e-10 70.9 68 54.4
FAN09G0423 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.7e-10 70.5 52 65.4
TPR.G32042 Trifolium pratense HOM05D006332 ORTHO05D034078 6.3e-10 69.7 40 85.0
Cfa022434 Carpinus fangiana HOM05D006332 ORTHO05D121602 2.2e-07 61.2 288 24.3
Cpa.g.sc777.3 Carica papaya HOM05D006332 ORTHO05D034078 2.9e-07 60.8 37 75.7
Haze_21185 Corylus avellana HOM05D000405 ORTHO05D000712 6.5e-07 59.7 27 96.3


User provided reference genes

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