Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G048000 Carya illinoinensis HOM05D007733 ORTHO05D009786 7.1e-30 133.3 67 100.0
CSS0035024 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.2e-21 105.9 60 85.0
Sed0021033 Sechium edule HOM05D007733 ORTHO05D009786 2.3e-20 101.7 55 85.5
MELO3C019082.2 Cucumis melo HOM05D007733 ORTHO05D009786 3.0e-20 101.3 55 85.5
CsaV3_4G029620 Cucumis sativus L. HOM05D007733 ORTHO05D009786 3.0e-20 101.3 55 85.5
Oeu063785.1 Olea europaea HOM05D007733 ORTHO05D009786 6.7e-20 100.1 59 84.7
PGSC0003DMG401008361 Solanum tuberosum HOM05D007733 ORTHO05D009786 8.7e-20 99.8 61 82.0
Peaxi162Scf00696g00026 Petunia axillaris HOM05D007733 ORTHO05D009786 1.1e-19 99.4 50 92.0
Solyc10g078420.2 Solanum lycopersicum HOM05D007733 ORTHO05D009786 1.1e-19 99.4 61 82.0
Hma1.2p1_0757F.1_g213300 Hydrangea macrophylla HOM05D007733 ORTHO05D009786 1.5e-19 99.0 61 82.0
CSS0016184 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 3.3e-19 97.8 60 80.0
CSS0036430 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 3.3e-19 97.8 60 80.0
CDE04G2892 Ceratophyllum demersum HOM05D007733 ORTHO05D009786 3.3e-19 97.8 60 75.0
Manes.01G136000 Manihot esculenta HOM05D007733 ORTHO05D009786 3.3e-19 97.8 57 82.5
Cc06_g19360 Coffea canephora HOM05D007733 ORTHO05D009786 5.6e-19 97.1 55 81.8
Atru.chr1.1436 Acer truncatum HOM05D007733 ORTHO05D009786 7.4e-19 96.7 53 83.0
CAN.G960.60 Capsicum annuum HOM05D007733 ORTHO05D009786 9.6e-19 96.3 61 78.7
Lalb_Chr06g0173691 Lupinus albus HOM05D007733 ORTHO05D009786 9.6e-19 96.3 57 80.7
MD00G1018100 Malus domestica HOM05D007733 ORTHO05D009786 1.6e-18 95.5 59 78.0
MD12G1095600 Malus domestica HOM05D007733 ORTHO05D009786 1.6e-18 95.5 66 71.2
Thecc.01G129600 Theobroma cacao HOM05D007733 ORTHO05D009786 1.6e-18 95.5 60 81.7
Migut.J01653 Erythranthe guttata HOM05D007733 ORTHO05D009786 2.1e-18 95.1 55 81.8
PGR031G3673 Punica granatum HOM05D007733 ORTHO05D009786 2.8e-18 94.7 59 81.4
Glyma.12G186000 Glycine max HOM05D007733 ORTHO05D009786 3.6e-18 94.4 57 77.2
SGA_v2.0_scaffold105G30286 Striga asiatica HOM05D007733 ORTHO05D009786 3.6e-18 94.4 55 81.8
SGA_v2.0_scaffold3G01720 Striga asiatica HOM05D007733 ORTHO05D009786 3.6e-18 94.4 55 81.8
Prupe.7G032300 Prunus persica HOM05D007733 ORTHO05D009786 8.1e-18 93.2 59 76.3
AT5G09225 Arabidopsis thaliana HOM05D007733 ORTHO05D009786 1.4e-17 92.4 65 72.3
Glyma.13G315500 Glycine max HOM05D007733 ORTHO05D009786 1.4e-17 92.4 57 75.4
Gohir.A11G247101 Gossypium hirsutum HOM05D007733 ORTHO05D009786 1.4e-17 92.4 59 76.3
Os11g0136701 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 1.4e-17 92.4 62 69.4
RcHm_v2.0_Chr1g0328511 Rosa chinensis HOM05D007733 ORTHO05D009786 1.4e-17 92.4 59 76.3
FAN06G4775 Fragaria x ananassa HOM05D007733 ORTHO05D009786 1.8e-17 92.0 57 75.4
FAN10G3322 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.8e-17 92.0 57 75.4
Potri.016G036400 Populus trichocarpa HOM05D007733 ORTHO05D009786 1.8e-17 92.0 58 75.9
Aa31LG1G18010 Aethionema arabicum HOM05D007733 ORTHO05D009786 3.1e-17 91.3 66 69.7
Carub.0006s0778 Capsella rubella HOM05D007733 ORTHO05D009786 3.1e-17 91.3 67 68.7
CARHR204200 Cardamine hirsuta HOM05D007733 ORTHO05D009786 3.1e-17 91.3 67 70.1
AL6G19610 Arabidopsis lyrata HOM05D007733 ORTHO05D009786 4.0e-17 90.9 67 70.1
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 4.0e-17 90.9 55 76.4
Thhalv10015230m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 5.3e-17 90.5 59 72.9
Phvul.005G122800 Phaseolus vulgaris HOM05D007733 ORTHO05D009786 9.0e-17 89.7 54 77.8
RcHm_v2.0_Chr1g0328381 Rosa chinensis HOM05D007733 ORTHO05D009786 9.0e-17 89.7 59 74.6
RcHm_v2.0_Chr1g0328411 Rosa chinensis HOM05D007733 ORTHO05D009786 9.0e-17 89.7 59 72.9
Thhalv10005241m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 1.2e-16 89.4 66 66.7
THA.LOC104819346 Tarenaya hassleriana HOM05D007733 ORTHO05D009786 1.2e-16 89.4 56 71.4
Aqoxy1G00180 Aquilegia oxysepala HOM05D007733 ORTHO05D009786 1.5e-16 89.0 49 83.7
Nitab4.5_0000812g0080 Nicotiana tabacum HOM05D007733 ORTHO05D009786 1.5e-16 89.0 41 97.6
Os12g0133600 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 1.5e-16 89.0 62 66.1
Psat4g102040 Pisum sativum HOM05D007733 ORTHO05D009786 1.5e-16 89.0 56 75.0
Potri.006G039100 Populus trichocarpa HOM05D007733 ORTHO05D009786 1.5e-16 89.0 50 80.0
BcaC03g13244 Brassica carinata HOM05D007733 ORTHO05D009786 2.0e-16 88.6 60 68.3
C02p03760 Brassica napus HOM05D007733 ORTHO05D009786 2.0e-16 88.6 60 68.3
BolC2t06337H Brassica oleracea HOM05D007733 ORTHO05D009786 2.0e-16 88.6 60 68.3
Duzib264G0681 Durio zibethinus HOM05D007733 ORTHO05D009786 2.0e-16 88.6 55 78.2
Nitab4.5_0004588g0050 Nicotiana tabacum HOM05D007733 ORTHO05D009786 2.0e-16 88.6 42 92.9
Sp6g34080 Schrenkiella parvula HOM05D007733 ORTHO05D009786 2.0e-16 88.6 67 67.2
TWI74G1577 Tripterygium wilfordii HOM05D007733 ORTHO05D009786 2.6e-16 88.2 62 71.0
BcaB05g21564 Brassica carinata HOM05D007733 ORTHO05D009786 3.4e-16 87.8 62 66.1
BraA02t04971Z Brassica rapa HOM05D007733 ORTHO05D009786 3.4e-16 87.8 67 65.7
Medtr1g069390 Medicago truncatula HOM05D007733 ORTHO05D009786 3.4e-16 87.8 56 73.2
arahy.Tifrunner.gnm1.ann1.2TE5XM Arachis hypogaea HOM05D007733 ORTHO05D009786 5.8e-16 87.0 59 69.5
CANSAT64G1685 Cannabis sativa HOM05D007733 ORTHO05D009786 1.3e-15 85.9 61 70.5
PSO384G4410 Papaver somniferum HOM05D007733 ORTHO05D009786 1.7e-15 85.5 57 70.2
Peaxi162Scf00848g00014 Petunia axillaris HOM05D007733 ORTHO05D009786 2.9e-15 84.7 41 90.2
MBI19_g20791_MAGBIO Magnolia biondii HOM05D007733 ORTHO05D009786 3.8e-15 84.3 45 82.2
vmacro07790 Vaccinium macrocarpon HOM05D007733 ORTHO05D009786 3.8e-15 84.3 49 79.6
Lsat_1_v5_gn_5_157040 Lactuca sativa HOM05D007733 ORTHO05D009786 4.9e-15 84.0 52 82.7
HanXRQChr01g0008231 Helianthus annuus HOM05D007733 ORTHO05D009786 6.4e-15 83.6 53 75.5
Oeu022972.2 Olea europaea HOM05D007733 ORTHO05D009786 8.4e-15 83.2 41 92.7
Hund24585 Selenicereus undatus HOM05D007733 ORTHO05D009786 8.4e-15 83.2 42 85.7
GSVIVG01004069001 Vitis vinifera HOM05D007733 ORTHO05D009786 1.9e-14 82.0 50 76.0
BcaB02g09770 Brassica carinata HOM05D007733 ORTHO05D009786 2.4e-14 81.6 53 69.8
Sc19g0008160 Simmondsia chinensis HOM05D007733 ORTHO05D009786 3.2e-14 81.3 41 87.8
BraA06t25997Z Brassica rapa HOM05D007733 ORTHO05D009786 4.2e-14 80.9 63 65.1
Peaxi162Scf00696g00024 Petunia axillaris HOM05D007733 ORTHO05D009786 4.2e-14 80.9 39 92.3
COL.COLO4_35702 Corchorus olitorius HOM05D007733 ORTHO05D009786 5.5e-14 80.5 41 87.8
BcaC01g02637 Brassica carinata HOM05D007733 ORTHO05D009786 7.1e-14 80.1 57 66.7
Manes.02G094502 Manihot esculenta HOM05D007733 ORTHO05D009786 7.1e-14 80.1 50 76.0
Gohir.D11G257301 Gossypium hirsutum HOM05D007733 ORTHO05D009786 1.6e-13 79.0 41 85.4
Gorai.007G275700 Gossypium raimondii HOM05D007733 ORTHO05D009786 1.6e-13 79.0 41 85.4
FAN01G2779 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.1e-13 78.6 41 82.9
A06p30480 Brassica napus HOM05D007733 ORTHO05D009786 4.6e-13 77.4 63 63.5
arahy.Tifrunner.gnm1.ann1.05QC9F Arachis hypogaea HOM05D007733 ORTHO05D009786 1.0e-12 76.3 55 67.3
DCAR_027120 Daucus carota HOM05D000958 ORTHO05D000786 1.1e-11 72.8 34 97.1
SalBow7G0067 Salvia bowleyana HOM05D007733 ORTHO05D009786 1.1e-11 72.8 56 62.5
Zm00001eb093420 Zea mays HOM05D007733 ORTHO05D009786 1.9e-11 72.0 41 70.7
HPP92_015863 Vanilla planifolia HOM05D007733 ORTHO05D009786 4.8e-10 67.4 40 70.0
HPP92_015865 Vanilla planifolia HOM05D007733 ORTHO05D009786 4.8e-10 67.4 40 70.0
Mapoly0009s0018 Marchantia polymorpha HOM05D007733 ORTHO05D009786 1.3e-07 59.3 59 52.5
Gohir.A11G247151 Gossypium hirsutum HOM05D007733 ORTHO05D009786 2.9e-07 58.2 63 58.7
RcHm_v2.0_Chr1g0328311 Rosa chinensis HOM05D007733 ORTHO05D009786 3.8e-07 57.8 34 73.5
CBR_g21252 Chara braunii HOM05D007733 ORTHO05D009786 4.9e-07 57.4 57 50.9


User provided reference genes

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