Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G043500 Carya illinoinensis HOM05D022937 ORTHO05D013287 9.4e-36 152.9 73 100.0
CiPaw.10G037100 Carya illinoinensis HOM05D022937 ORTHO05D013287 1.8e-15 85.5 72 59.7
Haze_19764 Corylus avellana HOM05D022937 ORTHO05D013287 5.0e-13 77.4 69 59.4
Cfa016739 Carpinus fangiana HOM05D022937 ORTHO05D013287 8.6e-13 76.6 69 59.4
QL07p004374 Quercus lobata HOM05D022937 ORTHO05D013287 1.1e-12 76.3 60 63.3
Cpa.g.sc5.186 Carica papaya HOM05D014689 ORTHO05D013287 3.4e-09 64.7 71 43.7
Thecc.05G143700 Theobroma cacao HOM05D023923 ORTHO05D013287 1.4e-07 59.3 52 53.8
QL07p004393 Quercus lobata HOM05D014870 ORTHO05D016915 2.4e-07 58.5 57 49.1
COL.COLO4_21289 Corchorus olitorius HOM05D016786 ORTHO05D019061 2.7e-06 55.1 46 60.9
Manes.08G055400 Manihot esculenta HOM05D014689 ORTHO05D013287 2.7e-06 55.1 37 75.7
Manes.08G055600 Manihot esculenta HOM05D014689 ORTHO05D013287 2.7e-06 55.1 37 75.7
MELO3C026600.2 Cucumis melo HOM05D022108 ORTHO05D025079 3.5e-06 54.7 71 43.7
QL07p004389 Quercus lobata HOM05D014870 ORTHO05D016915 3.5e-06 54.7 58 48.3
QL07p004663 Quercus lobata HOM05D014870 ORTHO05D016915 3.5e-06 54.7 58 50.0
Potri.006G044300 Populus trichocarpa HOM05D014689 ORTHO05D013287 4.6e-06 54.3 41 65.9
Manes.08G055300 Manihot esculenta HOM05D014689 ORTHO05D013287 6.0e-06 53.9 37 75.7


User provided reference genes

Program Settings