Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G042200 Carya illinoinensis HOM05D003740 ORTHO05D004611 3.2e-237 824.7 423 100.0
Haze_19750 Corylus avellana HOM05D003740 ORTHO05D004611 2.7e-215 751.9 423 90.8
Cfa016754 Carpinus fangiana HOM05D003740 ORTHO05D004611 1.5e-213 746.1 423 90.1
QL07p005086 Quercus lobata HOM05D003740 ORTHO05D004611 1.2e-202 709.9 392 91.8
TWI53G1619 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 7.8e-191 670.6 430 80.5
Prupe.7G050100 Prunus persica HOM05D003740 ORTHO05D004611 2.3e-190 669.1 426 81.0
TWI74G0940 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 2.5e-189 665.6 431 79.1
Dinv05312 Davidia involucrata HOM05D003740 ORTHO05D004611 5.6e-189 664.5 428 80.8
Dinv34246 Davidia involucrata HOM05D003740 ORTHO05D004611 5.6e-189 664.5 426 81.0
MD12G1086200 Malus domestica HOM05D003740 ORTHO05D004611 1.6e-188 662.9 426 79.8
Prupe.1G032300 Prunus persica HOM05D003740 ORTHO05D004611 2.1e-188 662.5 426 80.5
TWI77G0796 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 4.7e-188 661.4 430 80.0
ClCG04G004010 Citrullus lanatus HOM05D003740 ORTHO05D004611 1.1e-187 660.2 427 79.6
CsaV3_4G027630 Cucumis sativus L. HOM05D003740 ORTHO05D004611 1.8e-187 659.4 427 79.6
GSVIVG01033552001 Vitis vinifera HOM05D003740 ORTHO05D004611 1.8e-187 659.4 385 87.0
MELO3C014202.2 Cucumis melo HOM05D003740 ORTHO05D004611 4.0e-187 658.3 427 79.4
Eucgr.A02296 Eucalyptus grandis HOM05D003740 ORTHO05D004611 5.2e-187 657.9 430 78.6
MD14G1080600 Malus domestica HOM05D003740 ORTHO05D004611 2.0e-186 656.0 427 79.6
Sed0013360 Sechium edule HOM05D003740 ORTHO05D004611 2.0e-186 656.0 428 80.1
Manes.08G053600 Manihot esculenta HOM05D003740 ORTHO05D004611 2.6e-186 655.6 427 78.9
MSTRG.26143 Avicennia marina HOM05D003740 ORTHO05D004611 3.4e-186 655.2 425 79.3
RcHm_v2.0_Chr3g0484361 Rosa chinensis HOM05D003740 ORTHO05D004611 3.4e-186 655.2 427 79.2
VMungo0720G0943 Vigna mungo HOM05D003740 ORTHO05D004611 9.9e-186 653.7 428 79.9
PGR004G2716 Punica granatum HOM05D003740 ORTHO05D004611 1.7e-185 652.9 426 80.0
Phvul.007G249500 Phaseolus vulgaris HOM05D003740 ORTHO05D004611 3.7e-185 651.7 428 79.7
Glyma.02G190700 Glycine max HOM05D003740 ORTHO05D004611 4.9e-185 651.4 427 79.4
Migut.K00119 Erythranthe guttata HOM05D003740 ORTHO05D004611 8.3e-185 650.6 423 79.2
Glyma.10G105900 Glycine max HOM05D003740 ORTHO05D004611 8.3e-185 650.6 385 84.7
FAN09G1292 Fragaria x ananassa HOM05D003740 ORTHO05D004611 1.1e-184 650.2 423 79.0
Lj5g0015883 Lotus japonicus HOM05D003740 ORTHO05D004611 1.9e-184 649.4 425 78.8
FvH4_6g24760 Fragaria vesca HOM05D003740 ORTHO05D004611 4.1e-184 648.3 423 78.7
Sed0006234 Sechium edule HOM05D003740 ORTHO05D004611 4.1e-184 648.3 432 78.0
Ciclev10005020m.g Citrus clementina HOM05D003740 ORTHO05D004611 7.1e-184 647.5 432 78.9
Actinidia39193 Actinidia chinensis HOM05D003740 ORTHO05D004611 9.2e-184 647.1 427 78.0
TPR.G19664 Trifolium pratense HOM05D003740 ORTHO05D004611 2.1e-183 646.0 394 83.2
CSS0019779 Camellia sinensis var. sinensis HOM05D003740 ORTHO05D004611 4.6e-183 644.8 399 82.0
Peaxi162Scf00130g01015 Petunia axillaris HOM05D003740 ORTHO05D004611 6.0e-183 644.4 429 78.3
Sopen04g008590 Solanum pennellii HOM05D003740 ORTHO05D004611 6.0e-183 644.4 429 79.0
FAN05G1357 Fragaria x ananassa HOM05D003740 ORTHO05D004611 7.8e-183 644.0 423 78.7
Lalb_Chr02g0156411 Lupinus albus HOM05D003740 ORTHO05D004611 7.8e-183 644.0 422 79.1
Rhsim03G0031000 Rhododendron simsii HOM05D003740 ORTHO05D004611 1.7e-182 642.9 426 78.6
Ca_25790_v3 Cicer arietinum L. HOM05D003740 ORTHO05D004611 5.1e-182 641.3 423 78.5
Medtr3g045150 Medicago truncatula HOM05D003740 ORTHO05D004611 5.1e-182 641.3 423 78.0
THA.LOC104816968 Tarenaya hassleriana HOM05D003740 ORTHO05D004611 8.6e-182 640.6 425 77.4
Actinidia38142 Actinidia chinensis HOM05D003740 ORTHO05D004611 1.5e-181 639.8 425 78.8
Ah.13g076780 Amaranthus hybridus HOM05D003740 ORTHO05D004611 1.5e-181 639.8 429 76.5
Medtr0012s0090 Medicago truncatula HOM05D003740 ORTHO05D004611 1.5e-181 639.8 423 78.0
Psat6g118200 Pisum sativum HOM05D003740 ORTHO05D004611 9.5e-181 637.1 425 78.1
arahy.Tifrunner.gnm1.ann1.0DR8LC Arachis hypogaea HOM05D003740 ORTHO05D004611 1.2e-180 636.7 394 81.0
Atru.chr6.1381 Acer truncatum HOM05D003740 ORTHO05D004611 1.6e-180 636.3 423 79.0
EL10Ac3g07158 Beta vulgaris HOM05D003740 ORTHO05D004611 2.1e-180 636.0 437 76.9
MSTRG.10801 Avicennia marina HOM05D003740 ORTHO05D004611 3.6e-180 635.2 425 77.4
RcHm_v2.0_Chr3g0484511 Rosa chinensis HOM05D003740 ORTHO05D004611 3.6e-180 635.2 427 77.8
Lalb_Chr21g0316601 Lupinus albus HOM05D003740 ORTHO05D004611 1.1e-179 633.6 421 76.2
Thecc.05G145300 Theobroma cacao HOM05D003740 ORTHO05D004611 1.4e-179 633.3 425 77.4
arahy.Tifrunner.gnm1.ann1.G7Z7YE Arachis hypogaea HOM05D003740 ORTHO05D004611 2.4e-179 632.5 395 80.8
Migut.J01706 Erythranthe guttata HOM05D003740 ORTHO05D004611 1.7e-177 626.3 425 76.7
FAN02G1973 Fragaria x ananassa HOM05D003740 ORTHO05D004611 1.7e-177 626.3 440 75.0
Nn6g34910 Nelumbo nucifera HOM05D003740 ORTHO05D004611 1.7e-177 626.3 396 79.5
Nn7g37216 Nelumbo nucifera HOM05D003740 ORTHO05D004611 2.2e-177 625.9 396 79.8
Gohir.A09G119800 Gossypium hirsutum HOM05D003740 ORTHO05D004611 1.9e-176 622.9 424 76.2
Gohir.D09G116000 Gossypium hirsutum HOM05D003740 ORTHO05D004611 1.9e-176 622.9 424 76.2
Solyc04g016520.3 Solanum lycopersicum HOM05D003740 ORTHO05D004611 1.9e-176 622.9 429 76.9
CARHR136610 Cardamine hirsuta HOM05D003740 ORTHO05D004611 3.2e-176 622.1 441 73.7
THA.LOC104803288 Tarenaya hassleriana HOM05D003740 ORTHO05D004611 4.1e-176 621.7 430 75.3
HanXRQChr10g0277771 Helianthus annuus HOM05D003740 ORTHO05D004611 2.1e-175 619.4 423 75.4
BraA05t19226Z Brassica rapa HOM05D003740 ORTHO05D004611 6.0e-175 617.8 428 75.2
C04p02750 Brassica napus HOM05D003740 ORTHO05D004611 7.8e-175 617.5 426 75.1
BolC4t21915H Brassica oleracea HOM05D003740 ORTHO05D004611 7.8e-175 617.5 426 75.1
Oeu006922.2 Olea europaea HOM05D003740 ORTHO05D004611 7.8e-175 617.5 427 74.7
Sabra16G0047800 Salix brachista HOM05D003740 ORTHO05D004611 7.8e-175 617.5 394 78.7
Carub.0004s2379 Capsella rubella HOM05D003740 ORTHO05D004611 1.7e-174 616.3 439 73.1
DCAR_020539 Daucus carota HOM05D003740 ORTHO05D004611 2.3e-174 615.9 418 76.6
Sp4g23760 Schrenkiella parvula HOM05D003740 ORTHO05D004611 3.0e-174 615.5 434 74.2
PGSC0003DMG400012722 Solanum tuberosum HOM05D003740 ORTHO05D004611 3.0e-174 615.5 429 76.5
A05p02310 Brassica napus HOM05D003740 ORTHO05D004611 3.9e-174 615.1 423 75.2
AT2G41490 Arabidopsis thaliana HOM05D003740 ORTHO05D004611 6.6e-174 614.4 435 73.8
BcaNung06793 Brassica carinata HOM05D003740 ORTHO05D004611 6.6e-174 614.4 426 75.1
Atru.chr1.1193 Acer truncatum HOM05D003740 ORTHO05D004611 8.7e-174 614.0 396 80.1
FAN14G5242 Fragaria x ananassa HOM05D003740 ORTHO05D004611 1.5e-173 613.2 403 78.4
AL4G39580 Arabidopsis lyrata HOM05D003740 ORTHO05D004611 1.9e-173 612.8 435 73.8
AL5G38710 Arabidopsis lyrata HOM05D003740 ORTHO05D004611 1.9e-173 612.8 432 74.3
A09p50150 Brassica napus HOM05D003740 ORTHO05D004611 1.9e-173 612.8 423 74.7
BraA09t40467Z Brassica rapa HOM05D003740 ORTHO05D004611 1.9e-173 612.8 423 74.7
BcaC02g09904 Brassica carinata HOM05D003740 ORTHO05D004611 2.5e-173 612.5 427 74.2
C04p35340 Brassica napus HOM05D003740 ORTHO05D004611 2.5e-173 612.5 427 74.2
BolC4t25088H Brassica oleracea HOM05D003740 ORTHO05D004611 2.5e-173 612.5 427 74.2
Potri.006G045700 Populus trichocarpa HOM05D003740 ORTHO05D004611 4.3e-173 611.7 394 77.4
Carub.0005s2403 Capsella rubella HOM05D003740 ORTHO05D004611 5.6e-173 611.3 433 73.7
Thhalv10007732m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 5.6e-173 611.3 423 74.7
Gorai.006G134300 Gossypium raimondii HOM05D003740 ORTHO05D004611 5.6e-173 611.3 423 75.7
Thhalv10005999m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 7.3e-173 610.9 423 74.9
AT3G57220 Arabidopsis thaliana HOM05D003740 ORTHO05D004611 1.2e-172 610.1 429 74.1
SGA_v2.0_scaffold105G30359 Striga asiatica HOM05D003740 ORTHO05D004611 1.2e-172 610.1 403 78.9
BcaB02g08329 Brassica carinata HOM05D003740 ORTHO05D004611 3.6e-172 608.6 385 79.0
C08p32520 Brassica napus HOM05D003740 ORTHO05D004611 3.6e-172 608.6 424 74.8
Duzib128G1723 Durio zibethinus HOM05D003740 ORTHO05D004611 4.7e-172 608.2 405 78.0
Sc13g0001500 Simmondsia chinensis HOM05D003740 ORTHO05D004611 4.7e-172 608.2 409 75.8
BolC8t50867H Brassica oleracea HOM05D003740 ORTHO05D004611 1.1e-171 607.1 424 74.5
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 1.4e-171 606.7 377 79.6
Thhalv10016688m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 1.8e-171 606.3 431 74.0
BraA04t16052Z Brassica rapa HOM05D003740 ORTHO05D004611 3.1e-171 605.5 426 74.4
Rhsim04G0107900 Rhododendron simsii HOM05D003740 ORTHO05D004611 3.1e-171 605.5 426 75.1
AUR62024529 Chenopodium quinoa HOM05D003740 ORTHO05D004611 6.9e-171 604.4 431 73.8
unitig_748.g7227 Utricularia gibba HOM05D003740 ORTHO05D004611 1.2e-170 603.6 410 74.9
CSS0009879 Camellia sinensis var. sinensis HOM05D003740 ORTHO05D004611 3.4e-170 602.1 426 75.6
AUR62026121 Chenopodium quinoa HOM05D003740 ORTHO05D004611 5.8e-170 601.3 430 73.5
Lsat_1_v5_gn_6_15201 Lactuca sativa HOM05D003740 ORTHO05D004611 6.4e-169 597.8 403 76.4
CANSAT80G1617 Cannabis sativa HOM05D003740 ORTHO05D004611 2.4e-168 595.9 428 72.7
TAR636G0750 Trochodendron aralioides HOM05D003740 ORTHO05D004611 2.4e-168 595.9 406 75.6
PSO384G1999 Papaver somniferum HOM05D003740 ORTHO05D004611 5.4e-168 594.7 423 73.3
Cc06_g18360 Coffea canephora HOM05D003740 ORTHO05D004611 4.6e-167 591.7 371 80.3
PSO339G5696 Papaver somniferum HOM05D003740 ORTHO05D004611 4.6e-167 591.7 423 72.8
Potri.016G042100 Populus trichocarpa HOM05D003740 ORTHO05D004611 6.0e-167 591.3 387 78.0
Aa31LG1G23510 Aethionema arabicum HOM05D003740 ORTHO05D004611 1.0e-166 590.5 429 71.6
MBI13_g04792_MAGBIO Magnolia biondii HOM05D003740 ORTHO05D004611 3.3e-165 585.5 407 73.0
Aa31LG10G12120 Aethionema arabicum HOM05D003740 ORTHO05D004611 9.6e-165 583.9 479 66.4
CANSAT80G1359 Cannabis sativa HOM05D003740 ORTHO05D004611 2.8e-164 582.4 426 70.9
CDE08G1337 Ceratophyllum demersum HOM05D003740 ORTHO05D004611 1.4e-163 580.1 354 81.6
CAN.G1237.3 Capsicum annuum HOM05D003740 ORTHO05D004611 2.6e-162 575.9 335 85.7
Lj2A390G27 Lonicera japonica HOM05D003740 ORTHO05D004611 7.6e-162 574.3 414 73.9
Aqoxy2G02041 Aquilegia oxysepala HOM05D003740 ORTHO05D004611 1.4e-160 570.1 427 69.1
SEGI_04340 Sequoiadendron giganteum HOM05D003740 ORTHO05D004611 2.4e-160 569.3 423 68.6
TPR.G2316 Trifolium pratense HOM05D003740 ORTHO05D004611 7.1e-160 567.8 394 74.4
A04p03820 Brassica napus HOM05D003740 ORTHO05D004611 3.5e-159 565.5 426 70.9
Lj1A1122T44 Lonicera japonica HOM05D003740 ORTHO05D004611 7.9e-159 564.3 432 70.8
SalBow1G2954 Salvia bowleyana HOM05D003740 ORTHO05D004611 1.5e-157 560.1 453 69.3
Duzib106G0923 Durio zibethinus HOM05D003740 ORTHO05D004611 7.4e-157 557.8 423 70.2
Nitab4.5_0000826g0260 Nicotiana tabacum HOM05D003740 ORTHO05D004611 4.8e-156 555.1 440 69.1
COL.COLO4_21300 Corchorus olitorius HOM05D003740 ORTHO05D004611 8.4e-153 544.3 379 74.9
BcaC07g40064 Brassica carinata HOM05D003740 ORTHO05D004611 1.6e-151 540.0 322 83.2
Os07g0661100 Oryza sativa ssp. japonica HOM05D003740 ORTHO05D004611 7.9e-151 537.7 376 69.9
Zm00001eb110840 Zea mays HOM05D003740 ORTHO05D004611 1.8e-150 536.6 425 65.4
Zm00001eb329870 Zea mays HOM05D003740 ORTHO05D004611 1.8e-150 536.6 396 68.4
Hund19125 Selenicereus undatus HOM05D003740 ORTHO05D004611 5.6e-149 531.6 456 66.4
TAR633G2274 Trochodendron aralioides HOM05D003740 ORTHO05D004611 2.2e-145 519.6 320 82.2
DCAR_016970 Daucus carota HOM05D003740 ORTHO05D004611 3.8e-145 518.8 410 69.5
SMO364G0515 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 3.5e-143 512.3 402 64.7
ATR0782G053 Amborella trichopoda HOM05D003740 ORTHO05D004611 2.5e-141 506.1 346 73.4
Pp3c2_18380 Physcomitrium patens HOM05D003740 ORTHO05D004611 4.1e-139 498.8 431 62.2
RcHm_v2.0_Chr3g0484421 Rosa chinensis HOM05D003740 ORTHO05D004611 1.7e-137 493.4 416 66.1
Medtr8g446850 Medicago truncatula HOM05D003740 ORTHO05D004611 7.2e-136 488.0 333 77.2
Mapoly0120s0027 Marchantia polymorpha HOM05D003740 ORTHO05D004611 5.1e-134 481.9 428 59.1
TPR.G11551 Trifolium pratense HOM05D003740 ORTHO05D004611 3.4e-130 469.2 410 65.6
AagrBONN_evm.TU.Sc2ySwM_344.2027 Anthoceros agrestis HOM05D003740 ORTHO05D004611 2.9e-129 466.1 433 58.4
CARHR167400 Cardamine hirsuta HOM05D003740 ORTHO05D004611 5.0e-129 465.3 350 71.4
AUR62004393 Chenopodium quinoa HOM05D003740 ORTHO05D004611 4.7e-127 458.8 369 66.7
SHI12878 Sapria himalayana HOM05D003740 ORTHO05D004611 2.3e-126 456.4 394 61.4
vmacro09044 Vaccinium macrocarpon HOM05D003740 ORTHO05D004611 1.3e-116 424.1 241 86.3
AUR62022599 Chenopodium quinoa HOM05D003740 ORTHO05D004611 3.8e-113 412.5 335 65.7
SMO112G0012 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 4.4e-109 399.1 271 73.8
CiPaw.10G036600 Carya illinoinensis HOM05D003740 ORTHO05D004611 4.5e-106 389.0 211 93.4
Sp5g05360 Schrenkiella parvula HOM05D003740 ORTHO05D004611 1.5e-104 384.0 231 82.3
Cre16.g663100 Chlamydomonas reinhardtii HOM05D003740 ORTHO05D004611 1.0e-94 351.3 383 50.9
AagrBONN_evm.TU.Sc2ySwM_368.1663 Anthoceros agrestis HOM05D003740 ORTHO05D004611 5.2e-94 349.0 412 49.0
PRCOL_00006546 Prasinoderma coloniale HOM05D003740 ORTHO05D004611 3.1e-91 339.7 390 50.3
CBR_g48687 Chara braunii HOM05D003740 ORTHO05D004611 5.2e-86 322.4 277 58.8
SGA_v2.0_scaffold69G23130 Striga asiatica HOM05D003740 ORTHO05D004611 6.6e-81 305.4 349 54.4
SEGI_25729 Sequoiadendron giganteum HOM05D003740 ORTHO05D004611 4.3e-80 302.8 196 76.0
Aqoxy6G01654 Aquilegia oxysepala HOM05D003740 ORTHO05D004611 1.9e-67 260.8 222 63.5
Cpa.g.sc120.7 Carica papaya HOM05D003740 ORTHO05D004611 3.0e-65 253.4 151 83.4
Haze_26500 Corylus avellana HOM05D003740 ORTHO05D004611 1.9e-64 250.8 304 46.1
MCO05G206 Micromonas commoda HOM05D003740 ORTHO05D004611 1.8e-62 244.2 302 45.7
Cfa024885 Carpinus fangiana HOM05D003740 ORTHO05D004611 4.2e-59 233.0 317 42.3
HPP92_001282 Vanilla planifolia HOM05D003740 ORTHO05D004611 3.9e-57 226.5 212 56.6
Psat6g050760 Pisum sativum HOM05D003740 ORTHO05D018044 1.1e-51 208.4 120 82.5
AagrBONN_evm.TU.Sc2ySwM_117.4057 Anthoceros agrestis HOM05D003740 ORTHO05D004611 9.3e-51 205.3 182 60.4
Actinidia17677 Actinidia chinensis HOM05D003740 ORTHO05D004611 2.7e-50 203.8 425 37.6
Cpa.g.c37387 Carica papaya HOM05D003740 ORTHO05D004611 8.2e-31 139.0 134 59.0
vmacro09045 Vaccinium macrocarpon HOM05D003740 ORTHO05D004611 1.0e-28 132.1 75 86.7
MBI05_g15360_MAGBIO Magnolia biondii HOM05D003740 ORTHO05D004611 4.6e-26 123.2 69 84.1
TPR.G13517 Trifolium pratense HOM05D003740 ORTHO05D027079 2.4e-22 110.9 90 62.2
SMO112G0048 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 3.1e-22 110.5 75 70.7
Nitab4.5_0001618g0330 Nicotiana tabacum HOM05D003740 ORTHO05D004611 6.1e-18 96.3 54 81.5
Psat6g009800 Pisum sativum HOM05D003740 ORTHO05D004611 7.4e-16 89.4 61 73.8
BcaC09g48688 Brassica carinata HOM05D003740 ORTHO05D027079 8.2e-15 85.9 80 56.2
BNapus_Darmor_BZH_scaffold_38p00040 Brassica napus HOM05D003740 ORTHO05D027079 4.1e-14 83.6 113 48.7
TPR.G40499 Trifolium pratense HOM05D003740 ORTHO05D004611 3.4e-13 80.5 60 68.3
BcaC02g11255 Brassica carinata HOM05D003740 ORTHO05D015230 1.3e-12 78.6 74 56.8
Pp3c1_19750 Physcomitrium patens HOM05D003740 ORTHO05D004611 1.9e-11 74.7 123 40.7
TPR.G2297 Trifolium pratense HOM05D003740 ORTHO05D411092 1.1e-06 58.9 152 31.6
Ah.04g151350 Amaranthus hybridus HOM05D002173 ORTHO05D002189 1.4e-06 58.5 36 77.8
TPR.G39825 Trifolium pratense HOM05D003740 ORTHO05D411371 4.1e-06 57.0 33 81.8


User provided reference genes

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