Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 5.0e-173 610.9 288 100.0
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 3.8e-157 558.1 284 92.6
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 2.7e-155 552.0 284 89.8
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 3.6e-155 551.6 288 91.0
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 3.6e-155 551.6 288 91.0
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 6.1e-155 550.8 286 90.6
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 2.3e-154 548.9 284 89.8
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 3.0e-154 548.5 284 90.5
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 3.0e-154 548.5 284 89.4
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 4.0e-154 548.1 288 90.6
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 2.0e-153 545.8 284 89.4
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 9.8e-153 543.5 284 88.7
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 2.2e-152 542.3 284 89.8
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 2.2e-152 542.3 284 89.8
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 2.8e-152 542.0 287 89.5
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 6.3e-152 540.8 284 88.0
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 6.3e-152 540.8 284 89.1
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 8.3e-152 540.4 284 88.7
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 8.3e-152 540.4 284 88.7
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 1.1e-151 540.0 284 88.4
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 1.1e-151 540.0 284 88.0
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 1.1e-151 540.0 284 88.4
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 1.1e-151 540.0 284 87.7
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 1.4e-151 539.7 284 87.7
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 1.4e-151 539.7 284 88.7
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 1.8e-151 539.3 284 88.0
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 1.8e-151 539.3 285 88.8
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 1.8e-151 539.3 284 88.4
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 1.8e-151 539.3 282 90.1
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 5.4e-151 537.7 284 88.0
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 5.4e-151 537.7 284 88.4
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 7.0e-151 537.3 284 87.7
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 9.2e-151 537.0 284 88.4
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 1.2e-150 536.6 283 87.6
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 5.9e-150 534.3 282 89.4
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 1.0e-149 533.5 285 86.7
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 1.3e-149 533.1 284 88.4
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 1.3e-149 533.1 284 87.3
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 2.3e-149 532.3 290 87.2
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.3e-149 532.3 284 88.0
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 2.9e-149 531.9 284 86.6
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 3.8e-149 531.6 286 87.1
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 3.8e-149 531.6 281 88.3
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 6.6e-149 530.8 281 88.6
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 8.6e-149 530.4 285 85.3
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 1.1e-148 530.0 284 86.6
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 1.5e-148 529.6 284 86.6
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 1.9e-148 529.3 284 88.0
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 2.5e-148 528.9 284 86.3
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 3.3e-148 528.5 286 87.1
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 4.3e-148 528.1 283 86.6
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 9.5e-148 526.9 284 87.0
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 1.2e-147 526.6 288 86.8
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 3.6e-147 525.0 284 85.6
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 8.0e-147 523.9 284 87.0
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 1.0e-146 523.5 284 85.2
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 3.0e-146 521.9 284 85.6
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 1.5e-145 519.6 283 86.2
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 2.0e-145 519.2 286 85.0
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 2.0e-145 519.2 281 85.8
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 2.6e-145 518.8 282 84.8
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 3.4e-145 518.5 284 83.8
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 1.3e-144 516.5 284 85.6
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 2.2e-144 515.8 282 85.8
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 2.9e-144 515.4 285 83.9
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 2.9e-144 515.4 272 87.1
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 8.3e-144 513.8 281 84.0
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 8.3e-144 513.8 285 82.1
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 4.1e-143 511.5 301 80.4
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 5.4e-143 511.1 285 84.6
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 7.0e-143 510.8 284 83.1
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 1.0e-141 506.9 281 84.7
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 1.0e-141 506.9 284 83.1
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 1.7e-141 506.1 280 84.6
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 3.9e-141 505.0 280 83.9
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 3.9e-141 505.0 284 84.5
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 1.5e-140 503.1 284 82.0
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 1.9e-140 502.7 298 80.9
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 3.3e-140 501.9 275 84.7
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 9.5e-140 500.4 283 82.3
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 1.2e-139 500.0 284 82.4
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 2.1e-139 499.2 279 83.5
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 3.6e-139 498.4 284 81.7
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 6.2e-139 497.7 284 81.7
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 6.2e-139 497.7 284 81.3
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 6.2e-139 497.7 284 81.7
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 8.0e-139 497.3 284 80.3
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 4.0e-138 495.0 284 82.4
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 4.0e-138 495.0 284 82.4
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 6.8e-138 494.2 279 82.4
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 1.5e-137 493.0 284 81.0
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 4.4e-137 491.5 284 80.3
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 4.4e-137 491.5 284 81.0
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 4.4e-137 491.5 284 80.3
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 7.5e-137 490.7 284 80.6
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 3.7e-136 488.4 281 79.0
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 3.7e-136 488.4 334 71.6
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 8.3e-136 487.3 284 81.0
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 1.1e-135 486.9 285 81.4
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 1.9e-135 486.1 285 81.1
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 1.9e-135 486.1 285 81.4
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 1.9e-135 486.1 285 81.4
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 3.2e-135 485.3 283 80.2
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 4.1e-135 485.0 282 80.1
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 2.5e-132 475.7 246 89.4
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 2.0e-129 466.1 284 75.4
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 9.8e-129 463.8 275 77.8
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 2.4e-127 459.1 281 75.8
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 5.4e-127 458.0 274 79.2
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 1.6e-123 446.4 276 73.6
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 4.7e-123 444.9 235 88.1
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 2.3e-122 442.6 286 77.6
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 4.6e-118 428.3 234 82.9
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 8.6e-117 424.1 225 88.0
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 2.5e-116 422.5 281 68.7
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 9.6e-108 394.0 280 65.4
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 1.3e-107 393.7 196 92.3
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 2.4e-106 389.4 278 66.2
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 1.7e-104 383.3 277 66.4
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 6.2e-99 364.8 219 77.2
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 3.7e-91 339.0 272 63.2
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 1.8e-90 336.7 282 58.2
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.8e-90 336.7 288 60.8
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 3.4e-81 305.8 171 85.4
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 1.9e-79 300.1 167 84.4
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 4.3e-76 288.9 259 52.5
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 1.0e-69 267.7 273 48.7
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 9.4e-63 244.6 295 47.5
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 3.6e-62 242.7 277 46.6
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 1.0e-61 241.1 231 53.7
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 5.7e-52 208.8 115 80.9
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 6.8e-45 185.3 103 80.6
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 1.4e-21 107.8 78 65.4
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 5.0e-16 89.4 61 67.2
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 9.5e-15 85.1 71 56.3
Pp3c1_10050 Physcomitrium patens HOM05D005608 ORTHO05D319324 9.8e-12 75.1 56 57.1
PSO765G0043 Papaver somniferum HOM05D005608 ORTHO05D302623 6.2e-06 55.8 47 61.7


User provided reference genes

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