Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 1.8e-130 469.2 222 100.0
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 1.0e-109 400.2 222 83.8
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 5.7e-100 367.9 218 80.3
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 4.5e-97 358.2 212 78.3
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 1.3e-96 356.7 212 75.5
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 1.1e-95 353.6 212 74.5
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 1.9e-95 352.8 224 72.8
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 5.5e-95 351.3 223 75.3
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 7.2e-95 350.9 212 75.5
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 1.0e-93 347.1 221 72.4
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 5.1e-93 344.7 215 72.1
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 6.7e-93 344.4 224 71.9
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 1.1e-92 343.6 211 73.5
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 2.0e-92 342.8 224 71.9
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 2.0e-92 342.8 224 71.9
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 3.3e-92 342.0 226 69.0
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.1e-90 337.0 217 73.3
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.6e-89 332.4 225 69.3
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 1.3e-88 330.1 213 67.6
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 1.7e-88 329.7 226 69.0
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 6.5e-88 327.8 209 69.4
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 1.9e-87 326.2 209 70.8
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 3.2e-87 325.5 224 67.0
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 4.2e-87 325.1 219 65.8
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 5.5e-87 324.7 209 70.3
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 7.2e-87 324.3 212 72.6
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 7.2e-87 324.3 208 71.6
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 9.4e-87 323.9 220 67.7
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 1.6e-86 323.2 224 66.5
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 2.1e-86 322.8 212 69.3
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.1e-86 322.8 225 67.1
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 2.1e-86 322.8 227 66.5
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 3.6e-86 322.0 203 70.9
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 4.7e-86 321.6 219 68.5
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 6.1e-86 321.2 224 66.1
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 7.9e-86 320.9 219 67.1
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 1.4e-85 320.1 210 68.6
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 1.8e-85 319.7 218 68.3
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 1.8e-85 319.7 224 65.2
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.8e-85 319.7 219 64.4
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 2.3e-85 319.3 218 65.6
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 5.1e-85 318.2 207 69.6
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 6.7e-85 317.8 220 64.5
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 8.8e-85 317.4 213 68.1
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 1.5e-84 316.6 213 69.0
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 2.6e-84 315.8 226 63.3
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 2.6e-84 315.8 213 67.6
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 3.3e-84 315.5 220 68.2
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 3.3e-84 315.5 212 68.9
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 4.4e-84 315.1 213 67.6
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 4.4e-84 315.1 219 63.9
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 7.4e-84 314.3 222 62.6
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 9.7e-84 313.9 217 64.5
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 9.7e-84 313.9 217 64.5
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 1.3e-83 313.5 213 63.4
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 1.3e-83 313.5 213 68.1
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 1.7e-83 313.2 219 64.4
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 1.7e-83 313.2 211 67.3
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 1.7e-83 313.2 211 67.3
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 3.7e-83 312.0 212 67.9
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 4.8e-83 311.6 222 61.3
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 3.1e-82 308.9 220 62.3
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 3.1e-82 308.9 217 63.6
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 7.0e-82 307.8 222 60.8
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 4.5e-81 305.1 212 69.8
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 5.9e-81 304.7 227 60.4
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 5.9e-81 304.7 209 66.5
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 7.7e-81 304.3 227 60.4
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 1.3e-80 303.5 212 63.7
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 2.9e-80 302.4 213 66.2
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 3.8e-80 302.0 221 60.6
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 6.5e-80 301.2 225 64.0
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 9.4e-79 297.4 233 57.5
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 1.2e-78 297.0 218 62.4
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 4.7e-78 295.0 212 61.8
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 6.1e-78 294.7 219 64.4
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 5.2e-77 291.6 219 63.0
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 8.2e-75 284.3 185 67.0
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 3.5e-73 278.9 197 67.0
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 5.9e-73 278.1 201 63.2
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 5.0e-72 275.0 174 71.3
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 8.5e-72 274.2 221 58.8
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 2.5e-71 272.7 220 61.4
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 6.1e-70 268.1 194 62.9
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 1.4e-69 266.9 161 74.5
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 4.4e-68 261.9 188 66.5
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 1.3e-67 260.4 239 55.6
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 8.3e-67 257.7 212 56.6
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 1.6e-65 253.4 180 64.4
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 1.3e-64 250.4 214 55.6
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 1.9e-63 246.5 174 62.1
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 3.4e-60 235.7 202 53.0
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 9.8e-60 234.2 179 64.2
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 1.3e-59 233.8 172 60.5
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 6.3e-59 231.5 240 51.2
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 2.0e-57 226.5 161 65.8
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 1.8e-50 203.4 133 71.4
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 5.9e-49 198.4 216 45.8
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 5.6e-47 191.8 189 47.1
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 8.0e-46 188.0 105 77.1
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 1.4e-42 177.2 198 45.5
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 6.0e-41 171.8 210 43.3
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 4.7e-30 135.6 161 45.3
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 1.9e-26 123.6 97 59.8
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 4.6e-25 119.0 77 61.0
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 8.6e-24 114.8 81 65.4
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 1.4e-21 107.5 103 45.6
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 6.4e-19 98.6 91 49.5
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 1.3e-11 74.3 91 40.7
MELO3C032006.2 Cucumis melo HOM05D001831 ORTHO05D166811 5.1e-08 62.4 47 63.8
Haze_07863 Corylus avellana HOM05D000908 ORTHO05D000789 2.8e-06 56.6 43 65.1


User provided reference genes

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