Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 1.1e-214 749.6 361 100.0
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 1.3e-197 693.0 358 91.6
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 3.6e-197 691.4 358 91.6
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 6.2e-197 690.6 361 91.4
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 1.4e-196 689.5 359 90.5
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 2.4e-196 688.7 358 91.3
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 3.1e-196 688.3 358 91.3
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 4.0e-196 688.0 359 90.5
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 5.8e-195 684.1 360 90.6
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 7.6e-195 683.7 358 90.8
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 1.3e-194 682.9 359 89.1
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 1.7e-194 682.6 359 88.6
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 2.2e-194 682.2 358 90.5
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 8.4e-194 680.2 361 88.9
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 1.1e-193 679.9 359 88.9
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 1.9e-193 679.1 358 89.7
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 5.4e-193 677.6 359 88.6
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 1.2e-192 676.4 359 88.0
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 2.7e-192 675.2 359 91.1
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 6.0e-192 674.1 359 88.3
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 6.0e-192 674.1 359 88.9
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 1.0e-191 673.3 359 87.7
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.7e-191 672.5 359 89.1
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 2.3e-191 672.2 358 88.5
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 5.1e-191 671.0 358 88.3
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 8.7e-191 670.2 359 87.7
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 8.7e-191 670.2 359 87.7
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.9e-190 669.1 359 87.7
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 5.6e-190 667.5 359 86.1
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 7.3e-190 667.2 360 88.3
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 9.6e-190 666.8 359 86.4
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 1.3e-189 666.4 358 87.7
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 1.6e-189 666.0 368 86.7
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 4.8e-189 664.5 359 86.9
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 6.2e-189 664.1 359 86.1
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 6.2e-189 664.1 359 87.2
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.8e-188 662.5 359 86.6
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 2.4e-188 662.1 359 87.5
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 3.1e-188 661.8 359 87.5
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 4.0e-188 661.4 358 86.9
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 4.0e-188 661.4 359 86.4
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 1.2e-187 659.8 358 86.6
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 1.5e-187 659.4 358 86.3
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 5.8e-187 657.5 418 78.0
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 9.9e-187 656.8 359 86.1
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 1.3e-186 656.4 358 88.0
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.3e-186 656.4 358 86.6
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 4.9e-186 654.4 359 85.5
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 1.1e-185 653.3 361 84.5
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 1.4e-185 652.9 358 86.6
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.4e-185 652.9 358 86.6
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.9e-185 652.5 358 86.6
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 3.2e-185 651.7 360 85.6
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 7.1e-185 650.6 385 81.0
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 1.2e-184 649.8 358 86.0
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 2.7e-184 648.7 358 84.9
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 4.6e-184 647.9 358 86.3
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 6.0e-184 647.5 359 85.0
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 7.9e-184 647.1 394 79.2
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 3.0e-183 645.2 358 85.8
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 1.1e-182 643.3 359 83.3
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 1.1e-182 643.3 358 83.8
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 1.1e-182 643.3 359 83.8
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 2.5e-182 642.1 359 83.8
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 4.3e-182 641.3 359 83.6
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 9.6e-182 640.2 362 82.3
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 9.6e-182 640.2 359 83.3
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 8.1e-181 637.1 359 82.5
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 4.0e-180 634.8 425 73.6
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 1.2e-179 633.3 359 82.2
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 1.2e-179 633.3 359 82.2
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 1.2e-179 633.3 359 82.2
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 1.5e-179 632.9 359 81.9
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 1.5e-179 632.9 339 87.6
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 3.4e-179 631.7 358 82.7
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 3.4e-179 631.7 403 75.9
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 2.2e-178 629.0 359 81.3
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 6.5e-178 627.5 357 82.9
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 3.2e-177 625.2 359 81.9
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 9.3e-177 623.6 359 81.9
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 1.6e-176 622.9 359 80.8
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 3.5e-176 621.7 359 81.6
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 4.6e-176 621.3 359 81.6
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 1.0e-175 620.2 387 76.5
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 2.3e-175 619.0 359 81.3
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 6.7e-175 617.5 359 81.1
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 6.2e-173 610.9 358 81.0
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 6.2e-173 610.9 357 80.1
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 3.1e-172 608.6 357 80.1
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 5.8e-171 604.4 358 79.3
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 2.2e-170 602.4 359 79.9
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 4.2e-169 598.2 316 91.5
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 3.5e-168 595.1 366 76.2
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 1.3e-167 593.2 366 75.1
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 6.9e-164 580.9 357 76.2
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 7.7e-163 577.4 359 77.2
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 1.9e-161 572.8 302 91.1
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 1.4e-159 566.6 336 79.2
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 3.1e-156 555.4 316 84.2
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 4.2e-153 545.0 306 85.0
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 1.1e-150 537.0 403 67.7
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 6.5e-146 521.2 357 70.3
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 6.1e-144 514.6 358 67.9
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 8.8e-143 510.8 350 72.3
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 2.6e-142 509.2 358 67.3
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 1.2e-139 500.4 358 67.6
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 5.9e-131 471.5 368 62.8
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.7e-130 469.9 367 65.4
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 6.5e-130 468.0 250 90.0
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 6.5e-130 468.0 359 66.6
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 8.5e-130 467.6 244 93.4
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 1.5e-113 413.7 239 83.7
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 1.2e-110 404.1 211 88.6
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 1.5e-102 377.1 205 87.3
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 4.9e-77 292.4 180 81.7
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 3.8e-69 266.2 152 80.3
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 5.3e-63 245.7 154 75.3
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.1e-57 228.0 118 84.7
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 2.1e-56 223.8 126 81.0
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 3.4e-46 189.9 205 52.2
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 4.5e-46 189.5 326 37.7
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 6.3e-40 169.1 98 86.7
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 5.2e-34 149.4 117 67.5
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 1.5e-25 121.3 108 59.3
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 3.3e-25 120.2 57 93.0
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 2.7e-19 100.5 79 65.8
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 2.8e-16 90.5 57 70.2
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 1.2e-14 85.1 130 43.1
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 1.7e-13 81.3 37 94.6
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 7.5e-09 65.9 266 26.7


User provided reference genes

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