Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 6.8e-307 1056.6 567 100.0
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 5.1e-262 907.5 558 86.9
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 2.9e-257 891.7 553 86.4
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 2.4e-256 888.6 570 84.6
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 8.2e-236 820.5 571 77.4
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 1.0e-233 813.5 571 75.7
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 1.7e-233 812.8 571 77.2
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 3.8e-233 811.6 571 75.1
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 6.5e-233 810.8 568 74.6
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 7.9e-231 803.9 571 74.3
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.0e-230 803.5 566 75.4
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 2.3e-230 802.4 566 75.3
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 3.0e-230 802.0 567 77.2
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 3.0e-230 802.0 567 75.7
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 7.4e-229 797.3 571 75.8
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.8e-227 792.7 567 75.0
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 2.6e-226 788.9 568 73.8
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 5.9e-226 787.7 571 74.6
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.1e-224 783.5 576 73.3
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 2.5e-224 782.3 572 73.1
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.5e-224 782.3 568 74.8
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.1e-223 777.7 568 74.5
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 1.0e-222 776.9 567 73.9
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 5.1e-222 774.6 570 72.8
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 8.8e-222 773.9 568 74.1
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 8.8e-222 773.9 567 72.1
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 2.5e-221 772.3 570 72.1
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 3.3e-221 771.9 569 72.6
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 5.7e-221 771.2 568 72.9
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 1.7e-220 769.6 570 71.4
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.7e-220 768.5 582 72.2
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.8e-219 766.1 570 70.9
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 3.1e-219 765.4 571 72.0
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 6.9e-219 764.2 571 73.0
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 2.0e-218 762.7 570 72.3
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 4.5e-218 761.5 566 74.0
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 1.0e-217 760.4 570 71.6
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 2.2e-217 759.2 570 70.9
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 4.2e-216 755.0 570 71.2
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.6e-215 753.1 567 72.7
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 7.9e-215 750.7 571 69.4
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.4e-214 750.0 571 70.9
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.8e-214 749.6 567 70.5
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.3e-214 749.2 568 70.8
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 5.1e-214 748.0 567 70.5
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 1.1e-213 746.9 573 69.8
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 8.2e-212 740.7 574 70.7
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 2.4e-211 739.2 590 67.1
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 5.3e-211 738.0 570 68.9
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 1.5e-210 736.5 570 68.9
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 2.6e-210 735.7 641 64.3
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 9.7e-205 717.2 566 67.7
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.3e-204 716.8 569 66.4
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.7e-204 716.5 567 67.7
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 3.7e-204 715.3 566 67.5
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 4.8e-204 714.9 567 68.3
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 1.1e-203 713.8 571 67.1
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 1.8e-203 713.0 567 68.1
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.6e-202 709.9 567 67.9
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 2.2e-201 706.1 569 65.9
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 3.8e-201 705.3 574 68.1
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 5.0e-201 704.9 567 67.7
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 5.0e-201 704.9 568 68.0
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 8.5e-201 704.1 567 69.0
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.1e-200 703.7 567 67.5
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 1.5e-200 703.4 563 67.3
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 1.9e-200 703.0 567 67.4
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 4.2e-200 701.8 566 65.9
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 7.2e-200 701.0 587 64.2
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 2.2e-196 689.5 568 65.8
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 3.1e-195 685.6 570 63.9
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 5.3e-195 684.9 567 65.8
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 5.9e-194 681.4 566 64.0
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 1.7e-193 679.9 571 65.1
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 1.1e-192 677.2 566 64.0
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 3.2e-192 675.6 564 65.6
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 9.4e-192 674.1 572 65.0
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.2e-191 673.7 571 63.7
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 1.3e-188 663.7 529 68.8
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 9.1e-187 657.5 567 64.0
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 9.1e-187 657.5 567 64.0
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 2.7e-186 656.0 567 63.8
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.9e-184 649.8 567 63.5
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.9e-184 649.8 567 63.5
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 6.3e-180 634.8 566 62.4
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 5.4e-179 631.7 572 61.2
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.3e-177 627.1 483 70.0
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 4.0e-174 615.5 529 63.9
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 2.0e-173 613.2 572 60.5
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 7.0e-171 604.7 572 57.2
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 5.0e-169 598.6 576 58.0
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 1.5e-168 597.0 485 67.2
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 5.6e-168 595.1 636 53.3
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 7.3e-168 594.7 573 55.3
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 4.7e-159 565.5 526 59.1
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 2.6e-149 533.1 412 68.2
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 1.1e-123 448.0 451 57.2
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 6.7e-121 438.7 411 62.0
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 9.0e-118 428.3 591 42.0
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 1.5e-117 427.6 564 43.6
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 1.4e-107 394.4 583 39.5
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 1.5e-101 374.4 224 81.7
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 7.7e-101 372.1 237 80.2
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.9e-99 367.5 300 68.7
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 2.7e-98 363.6 588 38.1
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 3.7e-95 353.2 560 38.9
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 3.8e-92 343.2 293 65.5
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 4.4e-88 329.7 259 71.0
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 3.4e-72 276.9 263 57.0
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 2.9e-68 263.8 174 71.8
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 1.3e-63 248.4 376 46.3
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 1.6e-53 214.9 152 73.7
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 1.2e-48 198.7 589 27.5
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 1.4e-46 191.8 192 57.3
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.7e-36 158.3 157 63.1
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 3.8e-31 140.6 134 57.5
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.9e-27 128.3 71 83.1
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 3.9e-12 77.4 50 84.0
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 1.8e-09 68.6 64 56.2
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 5.8e-08 63.5 50 62.0


User provided reference genes

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