Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G030300 Carya illinoinensis HOM05D007306 ORTHO05D009112 1.1e-69 266.5 141 100.0
QL07p023738 Quercus lobata HOM05D007306 ORTHO05D009112 7.1e-48 194.1 142 76.1
Cfa020165 Carpinus fangiana HOM05D007306 ORTHO05D009112 6.7e-46 187.6 144 76.4
CiPaw.10G026400 Carya illinoinensis HOM05D007306 ORTHO05D009112 1.1e-45 186.8 143 75.5
Dinv14300 Davidia involucrata HOM05D007306 ORTHO05D009112 1.0e-41 173.7 137 69.3
Thecc.05G171400 Theobroma cacao HOM05D007306 ORTHO05D009112 1.9e-40 169.5 147 68.7
TAR623G0307 Trochodendron aralioides HOM05D007306 ORTHO05D009112 1.5e-37 159.8 137 68.6
Prupe.7G077000 Prunus persica HOM05D007306 ORTHO05D009112 3.7e-36 155.2 141 67.4
COL.COLO4_33982 Corchorus olitorius HOM05D007306 ORTHO05D009112 2.4e-35 152.5 151 63.6
Nn2g15686 Nelumbo nucifera HOM05D007306 ORTHO05D009112 4.1e-35 151.8 137 63.5
Atru.chr8.1112 Acer truncatum HOM05D007306 ORTHO05D009112 3.4e-34 148.7 146 61.6
Aqoxy1G00127 Aquilegia oxysepala HOM05D007306 ORTHO05D009112 3.4e-34 148.7 144 60.4
Cpa.g.sc85.66 Carica papaya HOM05D007306 ORTHO05D009112 5.9e-34 147.9 133 65.4
Duzib093G0428 Durio zibethinus HOM05D007306 ORTHO05D009112 5.9e-34 147.9 145 60.7
Potri.006G192500 Populus trichocarpa HOM05D007306 ORTHO05D009112 1.3e-33 146.7 147 62.6
PGR004G2053 Punica granatum HOM05D007306 ORTHO05D009112 1.3e-33 146.7 149 61.1
Hma1.2p1_0386F.1_g141880 Hydrangea macrophylla HOM05D007306 ORTHO05D009112 8.5e-33 144.1 140 64.3
arahy.Tifrunner.gnm1.ann1.I9AM74 Arachis hypogaea HOM05D007306 ORTHO05D009112 1.9e-32 142.9 141 60.3
Gohir.A01G191300 Gossypium hirsutum HOM05D007306 ORTHO05D009112 3.2e-32 142.1 146 62.3
Gorai.002G224300 Gossypium raimondii HOM05D007306 ORTHO05D009112 3.2e-32 142.1 157 59.2
arahy.Tifrunner.gnm1.ann1.T0JWFY Arachis hypogaea HOM05D007306 ORTHO05D009112 7.2e-32 141.0 141 60.3
Potri.016G045700 Populus trichocarpa HOM05D007306 ORTHO05D009112 9.3e-32 140.6 150 60.0
CANSAT64G1677 Cannabis sativa HOM05D007306 ORTHO05D009112 1.6e-31 139.8 147 63.3
Gohir.D01G178600 Gossypium hirsutum HOM05D007306 ORTHO05D009112 2.1e-31 139.4 157 58.6
Ciclev10013031m.g Citrus clementina HOM05D007306 ORTHO05D009112 3.6e-31 138.7 153 61.4
Lalb_Chr18g0047871 Lupinus albus HOM05D007306 ORTHO05D009112 3.6e-31 138.7 141 61.7
MD14G1057700 Malus domestica HOM05D007306 ORTHO05D009112 6.1e-31 137.9 141 63.8
MD12G1057100 Malus domestica HOM05D007306 ORTHO05D009112 7.9e-31 137.5 142 62.7
Peaxi162Scf00258g00720 Petunia axillaris HOM05D007306 ORTHO05D009112 1.8e-30 136.3 139 58.3
Psat3g068560 Pisum sativum HOM05D007306 ORTHO05D009112 3.0e-30 135.6 138 58.7
Lj1g0014955 Lotus japonicus HOM05D007306 ORTHO05D009112 3.3e-29 132.1 138 59.4
TPR.G22157 Trifolium pratense HOM05D007306 ORTHO05D009112 5.7e-29 131.3 138 58.7
TWI74G1393 Tripterygium wilfordii HOM05D007306 ORTHO05D009112 5.7e-29 131.3 141 57.4
RcHm_v2.0_Chr3g0479681 Rosa chinensis HOM05D007306 ORTHO05D009112 1.3e-28 130.2 138 60.9
FvH4_6g22320 Fragaria vesca HOM05D007306 ORTHO05D009112 1.6e-28 129.8 144 58.3
FAN05G3567 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.6e-28 129.8 144 58.3
Nitab4.5_0001137g0060 Nicotiana tabacum HOM05D007306 ORTHO05D009112 2.2e-28 129.4 140 55.0
FAN14G0362 Fragaria x ananassa HOM05D007306 ORTHO05D009112 4.8e-28 128.3 146 56.8
Nitab4.5_0007619g0010 Nicotiana tabacum HOM05D007306 ORTHO05D009112 6.3e-28 127.9 140 55.7
FAN02G3291 Fragaria x ananassa HOM05D007306 ORTHO05D009112 4.1e-27 125.2 144 56.9
FAN09G2453 Fragaria x ananassa HOM05D007306 ORTHO05D009112 4.1e-27 125.2 140 58.6
Manes.08G044500 Manihot esculenta HOM05D007306 ORTHO05D009112 1.5e-26 123.2 150 54.7
VMungo1383G3094 Vigna mungo HOM05D007306 ORTHO05D009112 2.2e-25 119.4 134 53.0
Migut.J01836 Erythranthe guttata HOM05D007306 ORTHO05D009112 3.8e-25 118.6 142 52.8
vmacro07907 Vaccinium macrocarpon HOM05D007306 ORTHO05D009112 3.8e-25 118.6 145 52.4
Actinidia32393 Actinidia chinensis HOM05D007306 ORTHO05D009112 8.5e-25 117.5 144 52.1
Glyma.03G144700 Glycine max HOM05D007306 ORTHO05D009112 2.5e-24 115.9 135 55.6
SalBow6G0438 Salvia bowleyana HOM05D007306 ORTHO05D009112 2.5e-24 115.9 133 51.9
SalBow6G2293 Salvia bowleyana HOM05D007306 ORTHO05D009112 2.5e-24 115.9 133 51.9
Phvul.001G142300 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 4.2e-24 115.2 135 51.1
PSO384G4645 Papaver somniferum HOM05D007306 ORTHO05D009112 5.5e-24 114.8 139 51.8
CARHR137170 Cardamine hirsuta HOM05D007306 ORTHO05D009112 7.2e-24 114.4 139 52.5
PSO339G5155 Papaver somniferum HOM05D007306 ORTHO05D009112 7.2e-24 114.4 139 51.8
Sed0004413 Sechium edule HOM05D007306 ORTHO05D009112 7.2e-24 114.4 146 53.4
AL4G40480 Arabidopsis lyrata HOM05D007306 ORTHO05D009112 1.2e-23 113.6 142 51.4
A05p02730 Brassica napus HOM05D007306 ORTHO05D009112 4.6e-23 111.7 136 51.5
BraA05t19265Z Brassica rapa HOM05D007306 ORTHO05D009112 4.6e-23 111.7 136 51.5
Actinidia22036 Actinidia chinensis HOM05D007306 ORTHO05D009112 6.1e-23 111.3 140 52.9
Rhsim03G0005900 Rhododendron simsii HOM05D007306 ORTHO05D009112 1.0e-22 110.5 139 51.1
Medtr7g093220 Medicago truncatula HOM05D007306 ORTHO05D009112 1.4e-22 110.2 141 52.5
Duzib106G0602 Durio zibethinus HOM05D007306 ORTHO05D009112 1.8e-22 109.8 147 48.3
Solyc03g120950.3 Solanum lycopersicum HOM05D007306 ORTHO05D009112 2.3e-22 109.4 133 52.6
MBI06_g29488_MAGBIO Magnolia biondii HOM05D007306 ORTHO05D009112 3.9e-22 108.6 129 51.2
Oeu063786.1 Olea europaea HOM05D007306 ORTHO05D009112 3.9e-22 108.6 133 51.1
C04p03260 Brassica napus HOM05D007306 ORTHO05D009112 5.1e-22 108.2 137 51.1
PGSC0003DMG400002614 Solanum tuberosum HOM05D007306 ORTHO05D009112 5.1e-22 108.2 133 52.6
BcaC02g12458 Brassica carinata HOM05D007306 ORTHO05D009112 6.7e-22 107.8 137 51.1
BcaC02g12459 Brassica carinata HOM05D007306 ORTHO05D009112 6.7e-22 107.8 137 51.1
BolC4t21964H Brassica oleracea HOM05D007306 ORTHO05D009112 6.7e-22 107.8 137 51.1
Sopen03g039780 Solanum pennellii HOM05D007306 ORTHO05D009112 6.7e-22 107.8 133 51.9
AT2G42110 Arabidopsis thaliana HOM05D007306 ORTHO05D009112 1.1e-21 107.1 140 49.3
Cc06_g15870 Coffea canephora HOM05D007306 ORTHO05D009112 1.5e-21 106.7 156 48.1
Sabra16G0049700 Salix brachista HOM05D007306 ORTHO05D009112 2.0e-21 106.3 100 66.0
Phvul.007G259800 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 3.3e-21 105.5 138 50.0
Aa31LG1G24110 Aethionema arabicum HOM05D007306 ORTHO05D009112 9.7e-21 104.0 135 50.4
MSTRG.19909 Avicennia marina HOM05D007306 ORTHO05D009112 9.7e-21 104.0 150 48.0
BcaNung04408 Brassica carinata HOM05D007306 ORTHO05D009112 2.8e-20 102.4 141 45.4
Carub.0004s2445 Capsella rubella HOM05D007306 ORTHO05D009112 2.8e-20 102.4 139 47.5
CAN.G1143.4 Capsicum annuum HOM05D007306 ORTHO05D009112 4.8e-20 101.7 133 49.6
Thhalv10017403m.g Eutrema salsugineum HOM05D007306 ORTHO05D009112 6.3e-20 101.3 141 46.1
HanXRQChr13g0390881 Helianthus annuus HOM05D007306 ORTHO05D009112 6.3e-20 101.3 149 46.3
Manes.09G035400 Manihot esculenta HOM05D007306 ORTHO05D009112 6.3e-20 101.3 136 52.2
SGA_v2.0_scaffold69G23062 Striga asiatica HOM05D007306 ORTHO05D009112 6.3e-20 101.3 143 46.9
Sp4g24320 Schrenkiella parvula HOM05D007306 ORTHO05D009112 8.2e-20 100.9 139 48.2
Glyma.19G147700 Glycine max HOM05D007306 ORTHO05D009112 2.4e-19 99.4 131 49.6
VMungo0720G2523 Vigna mungo HOM05D007306 ORTHO05D009112 2.4e-19 99.4 141 46.1
CsaV3_3G038820 Cucumis sativus L. HOM05D007306 ORTHO05D009112 3.1e-19 99.0 143 46.9
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 6.9e-19 97.8 135 48.1
AUR62012035 Chenopodium quinoa HOM05D007306 ORTHO05D009112 9.1e-19 97.4 147 46.9
Glyma.09G111500 Glycine max HOM05D007306 ORTHO05D009112 1.5e-18 96.7 139 47.5
ClCG10G017530 Citrullus lanatus HOM05D007306 ORTHO05D009112 2.0e-18 96.3 143 46.9
MELO3C009626.2 Cucumis melo HOM05D007306 ORTHO05D009112 2.6e-18 95.9 143 46.9
Hund24792 Selenicereus undatus HOM05D007306 ORTHO05D009112 1.0e-17 94.0 156 43.6
Lsat_1_v5_gn_5_163480 Lactuca sativa HOM05D007306 ORTHO05D009112 1.3e-17 93.6 137 48.2
GSVIVG01033497001 Vitis vinifera HOM05D007306 ORTHO05D009112 1.3e-17 93.6 137 46.0
AUR62015369 Chenopodium quinoa HOM05D007306 ORTHO05D009112 5.5e-16 88.2 158 46.2
Ca_08521_v3 Cicer arietinum L. HOM05D007306 ORTHO05D009112 6.1e-15 84.7 108 54.6
ECA248G3448 Erigeron canadensis HOM05D007306 ORTHO05D009112 2.3e-14 82.8 142 40.1
THA.LOC104802563 Tarenaya hassleriana HOM05D007306 ORTHO05D009112 3.0e-14 82.4 136 41.9
CDE02G0820 Ceratophyllum demersum HOM05D007306 ORTHO05D009112 6.3e-12 74.7 133 39.1
Sc19g0007100 Simmondsia chinensis HOM05D007306 ORTHO05D009112 8.2e-12 74.3 99 47.5
Ah.04g152480 Amaranthus hybridus HOM05D007306 ORTHO05D009112 5.3e-11 71.6 172 34.9
EL10Ac3g06917 Beta vulgaris HOM05D007306 ORTHO05D009112 1.6e-10 70.1 166 34.9
Sed0003989 Sechium edule HOM05D007306 ORTHO05D009112 5.5e-08 61.6 93 40.9
Haze_19991 Corylus avellana HOM05D000267 ORTHO05D000298 7.2e-08 61.2 31 87.1
Os03g0128300 Oryza sativa ssp. japonica HOM05D007306 ORTHO05D009112 9.4e-08 60.8 151 36.4
ATR0807G086 Amborella trichopoda HOM05D007306 ORTHO05D009112 1.2e-07 60.5 134 35.8
CSS0009036 Camellia sinensis var. sinensis HOM05D007306 ORTHO05D009112 2.7e-07 59.3 93 41.9


User provided reference genes

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