Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 1.4e-147 526.2 257 100.0
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 2.9e-124 448.7 263 83.7
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 4.4e-120 434.9 260 81.9
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 4.4e-120 434.9 260 81.9
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 8.8e-113 410.6 272 76.1
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 3.4e-112 408.7 263 76.4
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 2.4e-110 402.5 270 74.8
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 7.7e-109 397.5 261 74.3
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.7e-108 396.4 261 73.6
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 1.5e-107 393.3 258 76.4
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 1.9e-107 392.9 261 73.6
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 4.2e-107 391.7 259 73.4
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 3.6e-106 388.7 268 74.6
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 3.6e-106 388.7 268 74.6
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 6.1e-106 387.9 255 73.7
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 1.0e-105 387.1 275 73.1
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.8e-105 386.3 265 72.8
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.3e-105 386.0 261 75.5
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 5.2e-105 384.8 263 72.6
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 6.8e-105 384.4 263 72.6
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 8.8e-105 384.0 257 73.9
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 1.2e-104 383.6 265 71.7
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 1.5e-104 383.3 255 73.7
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 2.6e-104 382.5 258 73.6
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 4.4e-104 381.7 258 75.6
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 1.7e-103 379.8 254 73.6
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 2.2e-103 379.4 263 71.5
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 6.3e-103 377.9 256 73.0
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 1.8e-102 376.3 261 71.3
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.5e-101 372.1 261 73.2
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 5.9e-101 371.3 260 71.9
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 7.7e-101 370.9 201 85.6
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 7.7e-101 370.9 254 72.0
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 1.0e-100 370.5 263 71.5
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 1.3e-100 370.2 254 72.0
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 1.3e-100 370.2 202 85.6
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 3.8e-100 368.6 264 70.8
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 1.1e-99 367.1 261 69.7
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 9.5e-99 364.0 243 73.3
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 9.5e-99 364.0 272 65.8
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 1.2e-98 363.6 254 71.7
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 1.2e-98 363.6 265 69.4
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 2.8e-98 362.5 214 80.4
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 2.8e-98 362.5 242 71.9
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 4.7e-98 361.7 266 69.2
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 6.1e-98 361.3 263 66.5
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.4e-97 360.1 243 72.4
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 1.4e-97 360.1 266 69.2
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 2.3e-97 359.4 261 68.2
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 4.0e-97 358.6 254 69.7
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 5.2e-97 358.2 207 80.7
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 5.2e-97 358.2 194 85.6
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 1.5e-96 356.7 252 69.8
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 2.0e-96 356.3 251 69.3
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 2.6e-96 355.9 253 69.6
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 2.6e-96 355.9 254 69.3
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 3.4e-96 355.5 260 68.8
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 4.4e-96 355.1 277 66.1
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 6.4e-95 351.3 244 70.1
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 1.1e-94 350.5 269 65.1
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 1.1e-94 350.5 231 72.7
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 1.8e-94 349.7 254 68.9
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 3.2e-94 349.0 225 73.8
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 5.4e-94 348.2 194 82.5
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 7.0e-94 347.8 270 64.8
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 1.2e-93 347.1 197 80.7
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 1.2e-93 347.1 230 73.0
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 1.2e-93 347.1 224 72.8
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 1.6e-93 346.7 216 75.0
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 3.0e-92 342.4 225 72.4
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 3.0e-92 342.4 225 72.4
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 6.6e-92 341.3 198 80.3
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 1.5e-91 340.1 272 64.0
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 9.5e-91 337.4 230 71.3
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 9.5e-91 337.4 250 68.4
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 1.6e-90 336.7 271 66.4
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 1.6e-90 336.7 195 82.1
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 1.4e-89 333.6 250 65.2
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 5.2e-89 331.6 239 66.1
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 3.4e-88 328.9 194 78.4
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 5.4e-86 321.6 192 77.1
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 4.6e-85 318.5 269 62.5
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 1.0e-84 317.4 194 75.3
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 3.0e-84 315.8 269 61.7
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 1.1e-83 313.9 193 74.1
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 1.9e-83 313.2 194 72.7
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 4.7e-82 308.5 347 50.7
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.4e-81 307.0 249 63.1
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 4.9e-79 298.5 199 70.9
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 4.9e-79 298.5 167 80.2
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 8.3e-79 297.7 171 78.9
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 2.1e-77 293.1 280 60.0
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 4.6e-77 292.0 209 66.5
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 3.9e-76 288.9 209 72.7
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 2.5e-75 286.2 165 78.2
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.1e-73 280.8 164 75.6
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 1.1e-73 280.8 213 68.1
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 2.9e-71 272.7 483 38.9
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 2.6e-64 249.6 190 67.4
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 8.1e-58 228.0 190 63.2
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 1.5e-56 223.8 122 83.6
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 9.9e-56 221.1 171 69.6
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 8.4e-55 218.0 250 51.2
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 1.9e-54 216.9 210 56.2
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 7.9e-53 211.5 121 76.9
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 1.8e-52 210.3 264 47.7
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 5.1e-52 208.8 165 69.1
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 1.2e-45 187.6 109 79.8
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.2e-40 171.0 94 80.9
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 1.9e-35 153.7 215 45.1
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 1.1e-30 137.9 73 80.8
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 3.6e-29 132.9 76 78.9
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 4.3e-27 125.9 72 76.4
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 4.5e-16 89.4 96 53.1
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-09 66.6 75 52.0
Rhsim04G0095100 Rhododendron simsii HOM05D003299 ORTHO05D003811 3.2e-06 56.6 64 53.1


User provided reference genes

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