Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 3.4e-155 551.6 273 100.0
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 4.5e-123 444.9 273 82.4
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 5.9e-123 444.5 273 82.4
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 1.8e-119 433.0 273 81.0
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 1.6e-112 409.8 272 77.6
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 3.3e-102 375.6 272 69.1
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 7.2e-97 357.8 271 65.7
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 1.2e-96 357.1 272 66.2
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 8.8e-95 350.9 273 65.2
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 7.5e-94 347.8 273 64.5
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 5.3e-92 341.7 273 64.1
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 9.1e-92 340.9 272 65.4
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 2.0e-91 339.7 271 64.6
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 2.0e-91 339.7 273 64.1
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 2.0e-91 339.7 271 64.2
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 2.7e-91 339.3 275 64.0
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 3.5e-91 339.0 272 64.3
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 4.5e-91 338.6 273 63.4
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 5.9e-91 338.2 273 63.7
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 1.3e-90 337.0 274 63.9
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 2.2e-90 336.3 272 63.2
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 2.9e-90 335.9 272 63.6
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 6.5e-90 334.7 269 63.9
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 4.7e-88 328.6 271 63.8
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 4.4e-86 322.0 277 61.4
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 4.4e-86 322.0 277 61.4
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 5.7e-86 321.6 277 61.0
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.3e-85 320.5 277 60.3
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 3.7e-85 318.9 272 58.5
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 5.9e-83 311.6 274 58.0
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 1.3e-82 310.5 274 57.7
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 5.0e-82 308.5 228 65.4
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 8.6e-82 307.8 277 60.6
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 1.9e-81 306.6 209 69.4
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 3.3e-81 305.8 272 57.7
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 4.2e-81 305.4 272 56.2
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 4.2e-81 305.4 272 59.2
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 9.5e-81 304.3 207 68.6
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 1.2e-80 303.9 206 69.4
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 1.6e-80 303.5 272 58.8
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 2.8e-80 302.8 273 58.2
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 4.7e-80 302.0 283 57.6
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 2.3e-79 299.7 274 56.2
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 3.0e-79 299.3 273 59.0
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 5.2e-79 298.5 259 57.1
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 5.2e-79 298.5 188 76.6
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 2.6e-78 296.2 275 55.3
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 2.6e-78 296.2 274 56.2
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 2.6e-78 296.2 232 60.3
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 5.7e-78 295.0 210 64.8
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 7.5e-78 294.7 272 56.6
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 3.7e-77 292.4 275 55.6
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 3.7e-77 292.4 272 56.2
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 4.9e-77 292.0 207 65.2
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 1.4e-76 290.4 273 54.2
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 4.1e-76 288.9 232 61.2
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 5.4e-76 288.5 272 55.1
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 5.4e-76 288.5 244 58.6
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 1.2e-75 287.3 254 58.3
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 3.5e-75 285.8 209 65.6
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 5.0e-74 282.0 248 57.3
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 5.0e-74 282.0 244 58.6
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.1e-73 280.8 207 67.1
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 2.5e-73 279.6 273 53.5
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 3.3e-73 279.3 220 62.7
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 4.3e-73 278.9 272 53.7
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 5.6e-73 278.5 207 66.2
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 1.2e-72 277.3 272 52.9
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 1.6e-72 276.9 272 52.9
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 2.1e-72 276.6 278 57.2
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 2.8e-72 276.2 274 55.5
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 2.8e-72 276.2 210 65.2
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 5.2e-71 271.9 274 53.6
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 8.9e-71 271.2 275 52.7
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 8.9e-71 271.2 275 52.7
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 8.9e-71 271.2 275 52.7
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 4.4e-70 268.9 205 62.9
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 4.4e-70 268.9 274 54.0
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 9.8e-70 267.7 269 53.2
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 2.2e-69 266.5 205 62.9
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 2.9e-69 266.2 270 53.7
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 1.1e-68 264.2 249 54.2
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 1.7e-66 256.9 271 49.4
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 2.3e-66 256.5 270 50.7
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 1.1e-65 254.2 271 52.8
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 1.5e-65 253.8 280 50.7
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 3.3e-65 252.7 269 49.8
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 9.5e-65 251.1 273 52.4
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 8.0e-64 248.1 205 56.6
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 1.1e-63 247.7 269 51.7
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 1.1e-63 247.7 270 51.1
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 1.1e-63 247.7 272 49.3
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 2.4e-60 236.5 269 47.6
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.4e-60 236.5 264 51.5
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 7.8e-59 231.5 205 54.1
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 4.0e-55 219.2 204 53.4
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 1.2e-54 217.6 215 53.5
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 7.5e-54 214.9 206 55.8
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 4.1e-52 209.1 232 45.7
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 7.1e-52 208.4 256 43.8
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 6.0e-51 205.3 150 65.3
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 5.1e-50 202.2 187 55.6
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 4.4e-46 189.1 208 54.3
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 2.2e-37 160.2 282 37.2
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 2.4e-36 156.8 228 37.7
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 7.1e-36 155.2 140 55.7
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 4.6e-27 125.9 191 40.8
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 1.2e-22 111.3 190 33.7
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 4.5e-22 109.4 186 34.4
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 1.1e-20 104.8 75 62.7
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 3.9e-18 96.3 218 32.1
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.1e-17 94.7 64 67.2
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 3.3e-17 93.2 63 65.1
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 4.3e-17 92.8 141 33.3
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 7.6e-14 82.0 71 57.7
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 2.2e-13 80.5 71 56.3
Nn3g21845 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.8e-07 60.8 42 66.7
arahy.Tifrunner.gnm1.ann1.V9LMLG Arachis hypogaea HOM05D006815 ORTHO05D008536 7.7e-06 55.5 36 69.4


User provided reference genes

Program Settings