Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 1.9e-142 509.6 350 100.0
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 4.6e-120 435.3 349 87.7
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 6.0e-120 434.9 350 64.9
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 1.6e-112 410.2 350 73.4
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 7.8e-112 407.9 346 74.6
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 2.5e-110 402.9 350 70.6
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 3.6e-109 399.1 349 82.2
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 8.1e-109 397.9 346 81.8
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 4.0e-108 395.6 349 81.7
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 8.9e-108 394.4 344 73.5
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 3.4e-107 392.5 344 81.1
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 4.4e-107 392.1 344 81.4
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 5.8e-107 391.7 350 81.7
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 6.4e-106 388.3 344 80.8
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 1.4e-105 387.1 350 70.3
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 4.1e-105 385.6 350 82.9
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 9.2e-105 384.4 349 75.4
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 4.6e-104 382.1 344 79.9
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 8.6e-103 377.9 332 83.7
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 2.5e-102 376.3 350 78.6
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 5.6e-102 375.2 350 79.4
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 2.6e-99 366.3 347 78.4
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 4.4e-99 365.5 325 78.5
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 5.8e-99 365.2 346 69.9
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 9.9e-99 364.4 346 69.9
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 3.8e-98 362.5 344 78.5
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 6.4e-98 361.7 353 76.2
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 1.9e-97 360.1 341 78.9
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 3.5e-96 355.9 350 77.1
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 1.3e-95 354.0 382 54.2
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 1.3e-95 354.0 382 54.2
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 1.7e-95 353.6 347 66.6
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 2.3e-95 353.2 370 65.1
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 5.6e-94 348.6 349 74.8
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 9.6e-94 347.8 351 74.6
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 1.2e-93 347.4 352 77.0
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 4.7e-93 345.5 349 75.6
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 3.1e-92 342.8 350 75.1
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 6.9e-92 341.7 346 75.7
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 1.2e-91 340.9 350 66.9
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 2.6e-91 339.7 379 72.6
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 9.9e-91 337.8 346 66.5
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 1.7e-90 337.0 348 66.1
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 2.2e-90 336.7 346 75.4
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 6.4e-90 335.1 364 71.4
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 5.4e-89 332.0 346 75.4
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 4.6e-88 328.9 349 71.6
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 1.9e-86 323.6 346 72.0
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 1.1e-84 317.8 331 54.7
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 2.4e-84 316.6 358 71.5
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 9.0e-84 314.7 346 70.5
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 1.5e-83 313.9 346 63.0
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 5.8e-83 312.0 346 69.7
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 7.6e-83 311.6 345 67.0
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 1.1e-81 307.8 352 72.2
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 3.2e-81 306.2 359 49.6
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 9.3e-81 304.7 345 73.3
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 1.6e-80 303.9 341 72.7
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 4.6e-80 302.4 349 72.2
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 1.0e-79 301.2 346 59.2
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 1.8e-79 300.4 328 64.6
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 3.0e-79 299.7 351 71.2
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 3.9e-79 299.3 346 68.8
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 6.7e-79 298.5 345 72.5
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 8.7e-79 298.1 354 71.5
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 2.5e-78 296.6 349 64.8
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 7.4e-78 295.0 354 70.3
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 9.6e-78 294.7 349 64.2
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 2.1e-77 293.5 346 71.4
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 3.7e-77 292.7 346 71.4
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 1.1e-76 291.2 292 81.2
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 1.4e-76 290.8 277 74.0
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 1.8e-76 290.4 346 66.8
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 9.9e-75 284.6 327 51.4
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 6.4e-74 282.0 322 70.8
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 1.9e-73 280.4 330 66.1
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 3.2e-73 279.6 342 71.3
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 3.3e-70 269.6 277 69.7
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 8.2e-69 265.0 348 69.0
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 8.2e-69 265.0 348 69.0
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 8.2e-69 265.0 290 74.8
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 2.0e-67 260.4 286 75.9
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 6.5e-66 255.4 345 44.3
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 1.5e-62 244.2 344 50.9
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 1.1e-60 238.0 290 64.1
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 2.6e-59 233.4 278 63.3
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 2.6e-59 233.4 291 71.1
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 3.4e-59 233.0 350 60.9
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 1.8e-55 220.7 297 66.7
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 1.5e-54 217.6 404 41.8
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 1.3e-50 204.5 145 68.3
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 3.8e-50 203.0 296 69.3
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 6.5e-50 202.2 288 68.8
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 6.5e-50 202.2 136 72.1
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 1.1e-49 201.4 277 67.9
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 3.2e-49 199.9 277 67.9
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 2.3e-47 193.7 415 34.7
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 8.8e-47 191.8 406 53.2
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 2.4e-44 183.7 340 50.6
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 5.3e-44 182.6 261 72.4
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 3.5e-43 179.9 293 67.2
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 8.5e-42 175.3 341 49.3
Hund24823 Selenicereus undatus HOM05D007176 ORTHO05D009050 7.2e-41 172.2 114 72.8
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 1.5e-38 164.5 276 48.2
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 4.8e-37 159.5 346 50.9
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 1.2e-30 138.3 293 35.2
HanXRQChr05g0140621 Helianthus annuus HOM05D007176 ORTHO05D009050 5.7e-30 136.0 107 66.4
HanXRQChr10g0316231 Helianthus annuus HOM05D007176 ORTHO05D009050 5.7e-30 136.0 107 66.4
Hund24819 Selenicereus undatus HOM05D007176 ORTHO05D001610 1.4e-28 131.3 120 58.3
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 1.5e-25 121.3 289 45.0
Mapoly0209s0007 Marchantia polymorpha HOM05D007176 ORTHO05D009050 2.0e-22 110.9 124 47.6
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 3.4e-22 110.2 270 28.9
AUR62015309 Chenopodium quinoa HOM05D007176 ORTHO05D009050 6.3e-21 105.9 102 52.0
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 2.0e-06 57.8 84 41.7
unitig_736.g22302 Utricularia gibba HOM05D000180 ORTHO05D009050 3.4e-06 57.0 33 81.8
Medtr1g054600 Medicago truncatula HOM05D002729 ORTHO05D003163 7.5e-06 55.8 32 81.2


User provided reference genes

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