Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G026000 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.4e-75 286.2 141 100.0
CiPaw.03G017200 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.1e-37 160.2 145 64.1
QL09p002987 Quercus lobata HOM05D006738 ORTHO05D008191 1.4e-35 153.3 139 61.9
CiPaw.04G011300 Carya illinoinensis HOM05D006738 ORTHO05D008191 4.2e-32 141.7 149 57.0
RcHm_v2.0_Chr7g0216321 Rosa chinensis HOM05D006738 ORTHO05D008191 1.3e-30 136.7 142 54.2
QL09p004200 Quercus lobata HOM05D006738 ORTHO05D008191 1.9e-29 132.9 147 57.8
Haze_13918 Corylus avellana HOM05D006738 ORTHO05D008191 3.3e-29 132.1 145 54.5
QL09p004074 Quercus lobata HOM05D006738 ORTHO05D008191 1.6e-28 129.8 144 57.6
QL09p000479 Quercus lobata HOM05D006738 ORTHO05D008191 2.8e-28 129.0 109 64.2
EL10Ac9g22957 Beta vulgaris HOM05D006738 ORTHO05D008191 3.7e-28 128.6 141 50.4
Migut.C01346 Erythranthe guttata HOM05D006738 ORTHO05D008191 2.4e-27 125.9 144 50.0
FvH4_5g25840 Fragaria vesca HOM05D006738 ORTHO05D008191 2.4e-27 125.9 143 51.0
FAN18G1689 Fragaria x ananassa HOM05D006738 ORTHO05D008191 2.4e-27 125.9 143 51.0
FAN08G0599 Fragaria x ananassa HOM05D006738 ORTHO05D008191 3.1e-27 125.6 143 51.0
Nitab4.5_0006564g0050 Nicotiana tabacum HOM05D006738 ORTHO05D008191 4.1e-27 125.2 141 48.9
FAN04G1736 Fragaria x ananassa HOM05D006738 ORTHO05D008191 5.3e-27 124.8 143 51.0
Sc20g0004710 Simmondsia chinensis HOM05D006738 ORTHO05D008191 6.9e-27 124.4 141 48.9
ECA234G1792 Erigeron canadensis HOM05D006738 ORTHO05D008191 9.1e-27 124.0 142 47.2
QL09p000618 Quercus lobata HOM05D006738 ORTHO05D008191 1.5e-26 123.2 108 63.9
BraA09t38801Z Brassica rapa HOM05D006738 ORTHO05D008191 3.4e-26 122.1 137 51.1
Lsat_1_v5_gn_5_78501 Lactuca sativa HOM05D006738 ORTHO05D008191 4.5e-26 121.7 140 49.3
A09p32610 Brassica napus HOM05D006738 ORTHO05D008191 1.0e-25 120.6 137 50.4
Solyc06g064810.3 Solanum lycopersicum HOM05D006738 ORTHO05D008191 1.3e-25 120.2 141 49.6
Sopen06g023320 Solanum pennellii HOM05D006738 ORTHO05D008191 1.3e-25 120.2 141 49.6
PGSC0003DMG400005175 Solanum tuberosum HOM05D006738 ORTHO05D008191 2.2e-25 119.4 141 49.6
BcaC08g43833 Brassica carinata HOM05D006738 ORTHO05D008191 2.9e-25 119.0 137 49.6
C06p12150 Brassica napus HOM05D006738 ORTHO05D008191 2.9e-25 119.0 137 49.6
CSS0018644 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 2.9e-25 119.0 140 48.6
CSS0019392 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 2.9e-25 119.0 140 48.6
CsaV3_5G040220 Cucumis sativus L. HOM05D006738 ORTHO05D008191 3.8e-25 118.6 137 51.8
Ah.01g012440 Amaranthus hybridus HOM05D006738 ORTHO05D008191 5.0e-25 118.2 144 52.1
Lj3g0020973 Lotus japonicus HOM05D006738 ORTHO05D008191 5.0e-25 118.2 137 50.4
BolC6t36356H Brassica oleracea HOM05D006738 ORTHO05D008191 6.5e-25 117.9 137 48.9
arahy.Tifrunner.gnm1.ann1.WI646Q Arachis hypogaea HOM05D006738 ORTHO05D008191 1.9e-24 116.3 139 50.4
Prupe.1G547300 Prunus persica HOM05D006738 ORTHO05D008191 1.9e-24 116.3 149 49.0
unitig_748.g7730 Utricularia gibba HOM05D000331 ORTHO05D003399 3.2e-24 115.5 137 46.7
MD08G1215600 Malus domestica HOM05D006738 ORTHO05D008191 4.2e-24 115.2 149 49.0
QL09p000342 Quercus lobata HOM05D006738 ORTHO05D008191 4.2e-24 115.2 141 51.8
arahy.Tifrunner.gnm1.ann1.67ZQRX Arachis hypogaea HOM05D006738 ORTHO05D008191 7.2e-24 114.4 139 51.8
AL1G48260 Arabidopsis lyrata HOM05D006738 ORTHO05D008191 9.4e-24 114.0 138 48.6
MD15G1400100 Malus domestica HOM05D006738 ORTHO05D008191 9.4e-24 114.0 149 48.3
Aqoxy6G00074 Aquilegia oxysepala HOM05D006738 ORTHO05D008191 1.2e-23 113.6 143 46.2
COL.COLO4_24620 Corchorus olitorius HOM05D006738 ORTHO05D008191 1.2e-23 113.6 150 50.7
AT1G33810 Arabidopsis thaliana HOM05D006738 ORTHO05D008191 1.6e-23 113.2 138 48.6
DCAR_002119 Daucus carota HOM05D006738 ORTHO05D008191 1.6e-23 113.2 141 48.9
Thecc.08G171800 Theobroma cacao HOM05D006738 ORTHO05D008191 2.1e-23 112.8 150 50.7
Duzib211G0443 Durio zibethinus HOM05D006738 ORTHO05D008191 2.7e-23 112.5 150 50.0
VMungo1215G3331 Vigna mungo HOM05D006738 ORTHO05D008191 2.7e-23 112.5 137 50.4
PGR042G2463 Punica granatum HOM05D006738 ORTHO05D008191 3.6e-23 112.1 149 47.7
MELO3C022198.2 Cucumis melo HOM05D006738 ORTHO05D008191 4.6e-23 111.7 145 51.7
Potri.019G076400 Populus trichocarpa HOM05D006738 ORTHO05D008191 4.6e-23 111.7 150 48.0
Sabra19G0086800 Salix brachista HOM05D006738 ORTHO05D008191 4.6e-23 111.7 150 48.0
Gohir.A05G252100 Gossypium hirsutum HOM05D006738 ORTHO05D008191 6.1e-23 111.3 150 50.0
Gohir.D05G253900 Gossypium hirsutum HOM05D006738 ORTHO05D008191 1.4e-22 110.2 150 49.3
Atru.chr12.822 Acer truncatum HOM05D006738 ORTHO05D008191 1.8e-22 109.8 150 47.3
Ciclev10022763m.g Citrus clementina HOM05D006738 ORTHO05D008191 1.8e-22 109.8 151 45.7
Manes.02G195900 Manihot esculenta HOM05D006738 ORTHO05D008191 3.0e-22 109.0 143 46.2
Sed0003815 Sechium edule HOM05D006738 ORTHO05D008191 3.0e-22 109.0 146 49.3
TWI14G1101 Tripterygium wilfordii HOM05D006738 ORTHO05D008191 3.0e-22 109.0 149 47.7
arahy.Tifrunner.gnm1.ann1.H480WY Arachis hypogaea HOM05D006738 ORTHO05D008191 3.9e-22 108.6 135 50.4
Cpa.g.sc21.54 Carica papaya HOM05D006738 ORTHO05D008191 3.9e-22 108.6 151 49.7
HPP92_002035 Vanilla planifolia HOM05D006738 ORTHO05D008191 1.1e-21 107.1 146 48.6
CANSAT11G1518 Cannabis sativa HOM05D006738 ORTHO05D008191 2.0e-21 106.3 149 46.3
Cc10_g09240 Coffea canephora HOM05D006738 ORTHO05D008191 2.6e-21 105.9 138 46.4
Nn5g27492 Nelumbo nucifera HOM05D006738 ORTHO05D008191 5.7e-21 104.8 139 44.6
GSVIVG01025906001 Vitis vinifera HOM05D006738 ORTHO05D008191 9.7e-21 104.0 148 43.2
Dinv41794 Davidia involucrata HOM05D006738 ORTHO05D008191 1.3e-20 103.6 146 44.5
Cfa008114 Carpinus fangiana HOM05D006738 ORTHO05D008191 3.7e-20 102.1 141 46.1
Medtr4g031650 Medicago truncatula HOM05D006738 ORTHO05D008191 3.7e-20 102.1 145 45.5
CDE05G2754 Ceratophyllum demersum HOM05D006738 ORTHO05D008191 4.8e-20 101.7 138 43.5
TPR.G34128 Trifolium pratense HOM05D006738 ORTHO05D008191 4.8e-20 101.7 149 47.7
AUR62032974 Chenopodium quinoa HOM05D006738 ORTHO05D008191 8.2e-20 100.9 151 44.4
Oeu048220.2 Olea europaea HOM05D006738 ORTHO05D008191 1.4e-19 100.1 149 47.0
ATR1089G071 Amborella trichopoda HOM05D006738 ORTHO05D008191 1.8e-19 99.8 143 47.6
BcaB07g33015 Brassica carinata HOM05D006738 ORTHO05D008191 3.1e-19 99.0 137 44.5
THA.LOC104815902 Tarenaya hassleriana HOM05D006738 ORTHO05D008191 3.1e-19 99.0 137 43.8
Peaxi162Scf00269g01621 Petunia axillaris HOM05D006738 ORTHO05D008191 6.9e-19 97.8 141 43.3
AUR62017706 Chenopodium quinoa HOM05D006738 ORTHO05D008191 9.1e-19 97.4 145 45.5
Sp1g29140 Schrenkiella parvula HOM05D006738 ORTHO05D008191 9.1e-19 97.4 137 43.8
PSO782G5196 Papaver somniferum HOM05D006738 ORTHO05D008191 1.2e-18 97.1 143 42.0
Aa31LG6G8130 Aethionema arabicum HOM05D000065 ORTHO05D000162 1.5e-18 96.7 142 45.8
Lj2A790G37 Lonicera japonica HOM05D006738 ORTHO05D008191 1.5e-18 96.7 115 46.1
Eucgr.F02960 Eucalyptus grandis HOM05D006738 ORTHO05D008191 2.0e-18 96.3 150 45.3
Psat0s2394g0120 Pisum sativum HOM05D006738 ORTHO05D008191 2.6e-18 95.9 145 48.3
Os08g0112600 Oryza sativa ssp. japonica HOM05D006738 ORTHO05D008191 1.0e-17 94.0 144 40.3
Thhalv10009075m.g Eutrema salsugineum HOM05D006738 ORTHO05D008191 1.3e-17 93.6 141 43.3
Phvul.002G133500 Phaseolus vulgaris HOM05D006738 ORTHO05D008191 1.3e-17 93.6 145 46.9
Gorai.009G265500 Gossypium raimondii HOM05D006738 ORTHO05D008191 1.7e-17 93.2 94 56.4
Lalb_Chr01g0000011 Lupinus albus HOM05D006738 ORTHO05D008191 1.7e-17 93.2 137 44.5
PSO170G3684 Papaver somniferum HOM05D006738 ORTHO05D008191 1.7e-17 93.2 144 42.4
Glyma.01G010600 Glycine max HOM05D006738 ORTHO05D008191 3.8e-17 92.0 145 46.9
SGA_v2.0_scaffold24G10619 Striga asiatica HOM05D006738 ORTHO05D008191 6.5e-17 91.3 140 39.3
CARHR033210 Cardamine hirsuta HOM05D006738 ORTHO05D008191 1.4e-16 90.1 142 43.7
Carub.0001s3198 Capsella rubella HOM05D006738 ORTHO05D008191 3.2e-16 89.0 142 43.7
Actinidia29399 Actinidia chinensis HOM05D006738 ORTHO05D008191 2.7e-15 85.9 126 41.3
Rhsim07G0068100 Rhododendron simsii HOM05D006738 ORTHO05D008191 3.6e-15 85.5 155 37.4
ClCG08G000640 Citrullus lanatus HOM05D006738 ORTHO05D008191 6.3e-12 74.7 100 47.0
vmacro13762 Vaccinium macrocarpon HOM05D006738 ORTHO05D008191 8.2e-12 74.3 128 39.1
FAN13G2380 Fragaria x ananassa HOM05D006738 ORTHO05D008191 2.4e-11 72.8 145 36.6
MBI03_g14516_MAGBIO Magnolia biondii HOM05D006738 ORTHO05D008191 9.1e-11 70.9 109 45.0
HanXRQChr10g0309751 Helianthus annuus HOM05D006738 ORTHO05D008191 1.6e-10 70.1 82 48.8
Medtr4g031845 Medicago truncatula HOM05D006738 ORTHO05D008191 7.7e-10 67.8 65 56.9
Zm00001eb236960 Zea mays HOM05D002538 ORTHO05D008191 1.0e-09 67.4 122 40.2
Zm00001eb260580 Zea mays HOM05D006738 ORTHO05D008191 1.7e-09 66.6 98 42.9
Cc10_g16410 Coffea canephora HOM05D006738 ORTHO05D008191 1.5e-08 63.5 77 48.1
QL09p003020 Quercus lobata HOM05D006738 ORTHO05D008191 1.9e-08 63.2 71 50.7
Hma1.2p1_0935F.1_g238670 Hydrangea macrophylla HOM05D006738 ORTHO05D008191 2.7e-07 59.3 49 61.2
SMO118G0306 Selaginella moellendorffii HOM05D006738 ORTHO05D008191 2.3e-06 56.2 136 26.5
Pp3c3_5650 Physcomitrium patens HOM05D006738 ORTHO05D008191 4.0e-06 55.5 129 28.7


User provided reference genes

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