Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 3.4e-147 525.0 275 100.0
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 2.9e-98 362.5 277 71.1
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 2.5e-89 332.8 220 75.9
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 2.3e-82 309.7 275 61.1
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 4.3e-81 305.4 277 63.9
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 9.5e-81 304.3 268 61.2
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 2.1e-80 303.1 277 61.0
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 8.1e-80 301.2 276 61.2
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 1.2e-78 297.4 263 63.1
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 5.8e-78 295.0 278 59.0
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 1.3e-77 293.9 274 59.5
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 4.9e-77 292.0 277 59.6
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 6.4e-77 291.6 275 58.5
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 8.4e-77 291.2 216 68.5
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 1.1e-76 290.8 277 59.6
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 1.4e-76 290.4 279 58.1
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 1.4e-76 290.4 275 58.2
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 2.4e-76 289.7 277 58.1
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 3.2e-76 289.3 215 68.8
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 3.2e-76 289.3 277 58.1
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 5.4e-76 288.5 215 68.8
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 5.4e-76 288.5 275 59.6
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 5.4e-76 288.5 287 57.5
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 7.1e-76 288.1 277 58.1
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 4.6e-75 285.4 216 69.0
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 7.8e-75 284.6 276 56.9
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 7.8e-75 284.6 268 59.7
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 7.8e-75 284.6 278 56.8
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 1.3e-74 283.9 277 58.5
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 1.3e-74 283.9 276 56.5
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 1.7e-74 283.5 269 57.6
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 8.6e-74 281.2 215 66.5
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 1.1e-73 280.8 224 63.8
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 1.5e-73 280.4 222 67.1
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 1.9e-73 280.0 278 56.8
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 1.2e-72 277.3 281 55.9
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 2.8e-72 276.2 275 56.4
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 2.8e-72 276.2 283 58.7
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 4.7e-72 275.4 178 76.4
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 1.8e-71 273.5 205 68.3
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 3.1e-71 272.7 275 54.9
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 4.0e-71 272.3 285 55.1
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 6.8e-71 271.6 205 65.9
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 8.9e-71 271.2 218 63.3
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 1.5e-70 270.4 275 53.1
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 2.6e-70 269.6 205 66.3
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 2.2e-69 266.5 211 62.6
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 6.4e-69 265.0 199 66.8
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 1.9e-68 263.5 210 62.9
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 2.4e-68 263.1 202 65.8
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 3.2e-68 262.7 211 62.6
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 5.4e-68 261.9 208 60.6
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 7.1e-68 261.5 219 63.0
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 7.1e-68 261.5 206 62.6
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 7.1e-68 261.5 275 53.5
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 9.3e-68 261.2 206 63.6
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 2.7e-67 259.6 275 50.9
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 2.7e-67 259.6 215 59.5
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 2.7e-67 259.6 208 65.4
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 2.7e-67 259.6 282 51.8
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 3.5e-67 259.2 211 61.6
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 1.3e-66 257.3 218 61.0
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 1.7e-66 256.9 215 59.1
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 1.7e-66 256.9 241 57.7
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 2.3e-66 256.5 227 59.9
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 3.9e-66 255.8 215 60.0
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 8.7e-66 254.6 215 61.9
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 1.1e-65 254.2 216 62.5
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 1.9e-65 253.4 211 61.1
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 1.9e-65 253.4 215 58.1
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 2.5e-65 253.1 293 53.6
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 4.3e-65 252.3 215 59.5
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 1.6e-64 250.4 215 58.1
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 2.8e-64 249.6 211 58.8
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 8.1e-64 248.1 191 62.3
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 1.1e-63 247.7 204 64.2
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 1.4e-63 247.3 211 57.8
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 3.1e-63 246.1 203 60.1
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 6.9e-63 245.0 200 64.0
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 9.0e-63 244.6 224 60.7
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 1.2e-62 244.2 200 64.0
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 7.6e-62 241.5 314 48.1
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 2.2e-61 240.0 223 59.2
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 3.8e-61 239.2 238 54.6
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 4.9e-61 238.8 206 60.2
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 1.1e-60 237.7 276 50.7
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 7.1e-60 235.0 201 60.2
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 1.3e-58 230.7 276 52.9
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 3.0e-58 229.6 198 59.6
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 5.1e-58 228.8 222 59.9
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 5.1e-58 228.8 305 45.9
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 9.6e-57 224.6 154 75.3
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 1.6e-56 223.8 203 55.7
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 2.8e-56 223.0 171 67.8
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 9.0e-55 218.0 167 65.3
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 1.7e-53 213.8 161 68.3
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 3.8e-53 212.6 144 76.4
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 7.1e-52 208.4 148 68.9
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 3.9e-50 202.6 153 68.0
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 1.9e-49 200.3 137 71.5
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.3e-48 197.6 154 64.3
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 2.4e-47 193.4 185 52.4
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 1.2e-46 191.0 177 57.6
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis HOM05D001890 ORTHO05D008163 1.5e-46 190.7 202 46.5
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 5.8e-46 188.7 199 47.7
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 2.5e-44 183.3 112 77.7
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 2.5e-44 183.3 190 51.6
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 2.1e-43 180.3 146 58.9
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 5.3e-39 165.6 280 41.8
Mapoly0055s0040 Marchantia polymorpha HOM05D001890 ORTHO05D008163 4.2e-36 156.0 206 40.8
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.6e-35 154.1 114 64.9
CBR_g70174 Chara braunii HOM05D001890 ORTHO05D008163 3.3e-33 146.4 199 40.7
Psat1g223560 Pisum sativum HOM05D001890 ORTHO05D008163 1.3e-24 117.9 144 42.4
Cre11.g467718 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 2.2e-24 117.1 198 37.4
Cre12.g507559 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 2.2e-24 117.1 198 37.4
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 8.5e-21 105.1 82 67.1
SMO353G0218 Selaginella moellendorffii HOM05D001890 ORTHO05D008163 7.9e-19 98.6 123 39.0
Peaxi162Scf00675g00610 Petunia axillaris HOM05D001890 ORTHO05D008163 5.1e-18 95.9 64 73.4
MCO10G285 Micromonas commoda HOM05D001890 ORTHO05D008163 8.2e-16 88.6 221 30.3
CBR_g31284 Chara braunii HOM05D001890 ORTHO05D008163 5.3e-15 85.9 168 33.3
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 7.7e-14 82.0 103 46.6
Peaxi162Scf00675g00611 Petunia axillaris HOM05D001890 ORTHO05D008163 2.9e-13 80.1 100 49.0
Lj3C241T8 Lonicera japonica HOM05D001890 ORTHO05D008163 1.8e-07 60.8 48 56.2
Peaxi162Scf00767g00522 Petunia axillaris HOM05D001890 ORTHO05D008163 2.7e-06 57.0 48 52.1
SalBow1G6520 Salvia bowleyana HOM05D001890 ORTHO05D008163 4.5e-06 56.2 96 39.6


User provided reference genes

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