Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G015100 Carya illinoinensis HOM05D004855 ORTHO05D005656 6.6e-54 213.8 107 100.0
Cfa016620 Carpinus fangiana HOM05D004855 ORTHO05D005656 6.4e-49 197.2 107 88.8
Haze_19625 Corylus avellana HOM05D004855 ORTHO05D005656 1.1e-48 196.4 107 87.9
MELO3C009479.2 Cucumis melo HOM05D004855 ORTHO05D005656 3.3e-45 184.9 107 81.3
Prupe.7G108800 Prunus persica HOM05D004855 ORTHO05D005656 1.6e-44 182.6 107 78.5
GSVIVG01033859001 Vitis vinifera HOM05D004855 ORTHO05D005656 8.1e-44 180.3 108 76.9
CANSAT64G1995 Cannabis sativa HOM05D004855 ORTHO05D005656 3.1e-43 178.3 107 75.7
CsaV3_3G037350 Cucumis sativus L. HOM05D004855 ORTHO05D005656 3.1e-43 178.3 107 80.4
Dinv21197 Davidia involucrata HOM05D004855 ORTHO05D005656 4.0e-43 177.9 108 78.7
TAR633G0291 Trochodendron aralioides HOM05D004855 ORTHO05D005656 4.0e-43 177.9 108 76.9
Actinidia31268 Actinidia chinensis HOM05D004855 ORTHO05D005656 5.2e-43 177.6 107 74.8
ClCG10G018900 Citrullus lanatus HOM05D004855 ORTHO05D005656 6.8e-43 177.2 107 77.6
CSS0028852 Camellia sinensis var. sinensis HOM05D004855 ORTHO05D005656 7.6e-42 173.7 107 74.8
SGA_v2.0_scaffold31G12906 Striga asiatica HOM05D004855 ORTHO05D005656 7.6e-42 173.7 104 80.8
RcHm_v2.0_Chr3g0473901 Rosa chinensis HOM05D004855 ORTHO05D005656 9.9e-42 173.3 107 74.8
Sed0021085 Sechium edule HOM05D004855 ORTHO05D005656 1.3e-41 172.9 107 78.5
Sopen10g031710 Solanum pennellii HOM05D004855 ORTHO05D005656 1.7e-41 172.6 108 74.1
MD14G1024000 Malus domestica HOM05D004855 ORTHO05D005656 3.8e-41 171.4 107 72.9
Lj1g0021036 Lotus japonicus HOM05D004855 ORTHO05D005656 1.1e-40 169.9 108 75.9
arahy.Tifrunner.gnm1.ann1.DCW42B Arachis hypogaea HOM05D004855 ORTHO05D005656 1.9e-40 169.1 108 73.1
Phvul.001G191000 Phaseolus vulgaris HOM05D004855 ORTHO05D005656 2.4e-40 168.7 107 72.9
Lalb_Chr25g0288301 Lupinus albus HOM05D004855 ORTHO05D005656 4.1e-40 167.9 108 74.1
TWI74G1617 Tripterygium wilfordii HOM05D004855 ORTHO05D005656 4.1e-40 167.9 108 75.9
Atru.chr8.1484 Acer truncatum HOM05D004855 ORTHO05D005656 5.4e-40 167.5 108 75.0
FvH4_6g18910 Fragaria vesca HOM05D004855 ORTHO05D005656 5.4e-40 167.5 107 72.0
Oeu047859.1 Olea europaea HOM05D004855 ORTHO05D005656 1.2e-39 166.4 108 73.1
TWI77G0302 Tripterygium wilfordii HOM05D004855 ORTHO05D005656 1.2e-39 166.4 108 74.1
MSTRG.5853 Avicennia marina HOM05D004855 ORTHO05D005656 2.1e-39 165.6 108 74.1
Eucgr.K02028 Eucalyptus grandis HOM05D004855 ORTHO05D005656 2.7e-39 165.2 107 71.0
FAN05G0016 Fragaria x ananassa HOM05D004855 ORTHO05D005656 2.7e-39 165.2 107 71.0
Nn6g34881 Nelumbo nucifera HOM05D004855 ORTHO05D005656 2.7e-39 165.2 108 72.2
CAN.G128.111 Capsicum annuum HOM05D004855 ORTHO05D005656 3.5e-39 164.9 108 72.2
PGR142G1385 Punica granatum HOM05D004855 ORTHO05D005656 7.8e-39 163.7 107 71.0
Ciclev10013171m.g Citrus clementina HOM05D004855 ORTHO05D005656 1.0e-38 163.3 108 72.2
Cc06_g05940 Coffea canephora HOM05D004855 ORTHO05D005656 1.0e-38 163.3 108 73.1
SalBow3G4427 Salvia bowleyana HOM05D004855 ORTHO05D005656 1.0e-38 163.3 107 68.2
AUR62030671 Chenopodium quinoa HOM05D004855 ORTHO05D005656 2.3e-38 162.2 108 69.4
GSVIVG01000981001 Vitis vinifera HOM05D004855 ORTHO05D005656 2.3e-38 162.2 108 69.4
VMungo1383G3261 Vigna mungo HOM05D004855 ORTHO05D005656 3.0e-38 161.8 106 70.8
FAN02G3816 Fragaria x ananassa HOM05D004855 ORTHO05D005656 3.9e-38 161.4 107 69.2
Glyma.03G196800 Glycine max HOM05D004855 ORTHO05D005656 3.9e-38 161.4 109 71.6
Duzib106G1994 Durio zibethinus HOM05D004855 ORTHO05D005656 5.1e-38 161.0 107 68.2
Gohir.A11G319200 Gossypium hirsutum HOM05D004855 ORTHO05D005656 6.6e-38 160.6 107 70.1
Gohir.D11G338500 Gossypium hirsutum HOM05D004855 ORTHO05D005656 6.6e-38 160.6 107 70.1
Gorai.007G368300 Gossypium raimondii HOM05D004855 ORTHO05D005656 6.6e-38 160.6 107 70.1
Potri.006G211900 Populus trichocarpa HOM05D004855 ORTHO05D005656 1.1e-37 159.8 108 70.4
Potri.006G212100 Populus trichocarpa HOM05D004855 ORTHO05D005656 1.1e-37 159.8 108 70.4
CAN.G397.61 Capsicum annuum HOM05D004855 ORTHO05D005656 1.5e-37 159.5 107 68.2
Manes.09G054300 Manihot esculenta HOM05D004855 ORTHO05D005656 1.9e-37 159.1 108 70.4
Sc20g0006340 Simmondsia chinensis HOM05D004855 ORTHO05D005656 1.9e-37 159.1 107 65.4
CANSAT78G0615 Cannabis sativa HOM05D004855 ORTHO05D005656 3.3e-37 158.3 107 67.3
Migut.J01024 Erythranthe guttata HOM05D004855 ORTHO05D005656 3.3e-37 158.3 108 69.4
Lsat_1_v5_gn_8_77441 Lactuca sativa HOM05D004855 ORTHO05D005656 3.3e-37 158.3 107 70.1
Thecc.05G090600 Theobroma cacao HOM05D004855 ORTHO05D005656 3.3e-37 158.3 107 68.2
AL7G35690 Arabidopsis lyrata HOM05D004855 ORTHO05D005656 4.3e-37 157.9 107 67.3
Nitab4.5_0000692g0080 Nicotiana tabacum HOM05D004855 ORTHO05D005656 4.3e-37 157.9 107 67.3
Dinv10926 Davidia involucrata HOM05D004855 ORTHO05D005656 5.6e-37 157.5 108 70.4
THA.LOC104804847 Tarenaya hassleriana HOM05D004855 ORTHO05D005656 7.3e-37 157.1 107 64.5
AT4G18590 Arabidopsis thaliana HOM05D004855 ORTHO05D005656 9.6e-37 156.8 107 66.4
Peaxi162Scf00404g00216 Petunia axillaris HOM05D004855 ORTHO05D005656 9.6e-37 156.8 107 69.2
TPR.G23346 Trifolium pratense HOM05D004855 ORTHO05D005656 9.6e-37 156.8 108 69.4
Migut.L01788 Erythranthe guttata HOM05D004855 ORTHO05D005656 1.2e-36 156.4 108 71.3
Aa31LG6G1320 Aethionema arabicum HOM05D004855 ORTHO05D005656 2.1e-36 155.6 107 64.5
Cfa021941 Carpinus fangiana HOM05D004855 ORTHO05D005656 2.8e-36 155.2 107 67.3
QL04p046696 Quercus lobata HOM05D004855 ORTHO05D005656 2.8e-36 155.2 106 65.1
Ca_09013_v3 Cicer arietinum L. HOM05D004855 ORTHO05D005656 3.6e-36 154.8 108 70.4
QL07p038661 Quercus lobata HOM05D004855 ORTHO05D005656 3.6e-36 154.8 99 77.8
Thhalv10026639m.g Eutrema salsugineum HOM05D004855 ORTHO05D005656 6.2e-36 154.1 107 64.5
BcaC09g51486 Brassica carinata HOM05D004855 ORTHO05D005656 8.1e-36 153.7 107 64.5
BraA01t01006Z Brassica rapa HOM05D004855 ORTHO05D005656 8.1e-36 153.7 107 64.5
Carub.0007s2265 Capsella rubella HOM05D004855 ORTHO05D005656 8.1e-36 153.7 107 64.5
Medtr7g104870 Medicago truncatula HOM05D004855 ORTHO05D005656 1.4e-35 152.9 107 67.3
THA.LOC104805250 Tarenaya hassleriana HOM05D004855 ORTHO05D005656 1.4e-35 152.9 107 63.6
PGSC0003DMG400008876 Solanum tuberosum HOM05D004855 ORTHO05D005656 1.8e-35 152.5 107 65.4
Ah.10g026130 Amaranthus hybridus HOM05D004855 ORTHO05D005656 4.0e-35 151.4 108 63.9
CsaV3_5G035370 Cucumis sativus L. HOM05D004855 ORTHO05D005656 4.0e-35 151.4 107 64.5
Sopen09g004650 Solanum pennellii HOM05D004855 ORTHO05D005656 4.0e-35 151.4 107 64.5
Aqoxy4G02764 Aquilegia oxysepala HOM05D004855 ORTHO05D005656 5.2e-35 151.0 108 66.7
BcaNung03818 Brassica carinata HOM05D004855 ORTHO05D005656 5.2e-35 151.0 107 63.6
BcaNung06738 Brassica carinata HOM05D004855 ORTHO05D005656 5.2e-35 151.0 107 63.6
MELO3C012349.2 Cucumis melo HOM05D004855 ORTHO05D005656 1.2e-34 149.8 107 64.5
Sed0005547 Sechium edule HOM05D004855 ORTHO05D005656 1.2e-34 149.8 107 64.5
Thhalv10010848m.g Eutrema salsugineum HOM05D004855 ORTHO05D005656 2.0e-34 149.1 107 64.5
Sp5g09660 Schrenkiella parvula HOM05D004855 ORTHO05D005656 2.0e-34 149.1 107 64.5
Potri.010G239200 Populus trichocarpa HOM05D004855 ORTHO05D005656 3.4e-34 148.3 107 62.6
CiPaw.13G039700 Carya illinoinensis HOM05D004855 ORTHO05D005656 4.4e-34 147.9 107 64.5
Glyma.10G278800 Glycine max HOM05D004855 ORTHO05D005656 5.8e-34 147.5 107 61.7
CDE08G1222 Ceratophyllum demersum HOM05D004855 ORTHO05D005656 7.6e-34 147.1 107 61.7
AL5G33410 Arabidopsis lyrata HOM05D004855 ORTHO05D005656 9.9e-34 146.7 108 63.9
MBI18_g09594_MAGBIO Magnolia biondii HOM05D004855 ORTHO05D005656 9.9e-34 146.7 107 62.6
BcaB02g07823 Brassica carinata HOM05D004855 ORTHO05D005656 1.3e-33 146.4 109 63.3
Carub.0005s1905 Capsella rubella HOM05D004855 ORTHO05D005656 1.3e-33 146.4 108 63.0
MD12G1025300 Malus domestica HOM05D004855 ORTHO05D005656 1.7e-33 146.0 103 65.0
Glyma.20G111700 Glycine max HOM05D004855 ORTHO05D005656 2.2e-33 145.6 107 60.7
AT3G52630 Arabidopsis thaliana HOM05D004855 ORTHO05D005656 3.8e-33 144.8 108 62.0
PSO339G3393 Papaver somniferum HOM05D004855 ORTHO05D005656 3.8e-33 144.8 107 62.6
Psat3g032240 Pisum sativum HOM05D004855 ORTHO05D005656 3.8e-33 144.8 111 63.1
Sabra10G0187300 Salix brachista HOM05D004855 ORTHO05D005656 3.8e-33 144.8 107 62.6
Lalb_Chr21g0309181 Lupinus albus HOM05D004855 ORTHO05D005656 4.9e-33 144.4 107 62.6
PSO384G0979 Papaver somniferum HOM05D004855 ORTHO05D005656 6.4e-33 144.1 107 61.7
VMungo0720G0894 Vigna mungo HOM05D004855 ORTHO05D005656 8.4e-33 143.7 107 60.7
CARHR162450 Cardamine hirsuta HOM05D004855 ORTHO05D005656 1.1e-32 143.3 108 62.0
Phvul.007G022600 Phaseolus vulgaris HOM05D004855 ORTHO05D005656 1.1e-32 143.3 107 58.9
Nitab4.5_0003808g0090 Nicotiana tabacum HOM05D004855 ORTHO05D005656 5.4e-32 141.0 84 78.6
Ca_25663_v3 Cicer arietinum L. HOM05D004855 ORTHO05D005656 1.2e-31 139.8 108 63.0
Lj5g0001855 Lotus japonicus HOM05D004855 ORTHO05D005656 1.2e-31 139.8 107 59.8
Nitab4.5_0000062g0480 Nicotiana tabacum HOM05D004855 ORTHO05D005656 1.6e-31 139.4 84 77.4
Rhsim02G0090500 Rhododendron simsii HOM05D004855 ORTHO05D005656 2.1e-31 139.0 89 71.9
Medtr1g112020 Medicago truncatula HOM05D004855 ORTHO05D005656 7.8e-31 137.1 108 61.1
Solyc10g081210.3 Solanum lycopersicum HOM05D004855 ORTHO05D005656 7.8e-31 137.1 90 68.9
ECA236G2758 Erigeron canadensis HOM05D004855 ORTHO05D005656 1.3e-30 136.3 107 56.1
RhsimUnG0050400 Rhododendron simsii HOM05D000314 ORTHO05D000189 1.3e-30 136.3 87 71.3
Sp7g15440 Schrenkiella parvula HOM05D002603 ORTHO05D002907 1.7e-30 136.0 98 62.2
Medtr1g112040 Medicago truncatula HOM05D004855 ORTHO05D005656 3.9e-30 134.8 108 61.1
vmacro07416 Vaccinium macrocarpon HOM05D004855 ORTHO05D005656 3.9e-30 134.8 85 71.8
PGSC0003DMG400028113 Solanum tuberosum HOM05D004855 ORTHO05D005656 5.1e-30 134.4 88 75.0
Cpa.g.sc5.8 Carica papaya HOM05D004855 ORTHO05D005656 1.1e-29 133.3 85 71.8
BolC1t01228H Brassica oleracea HOM05D002603 ORTHO05D002907 1.5e-29 132.9 95 63.2
SEGI_35741 Sequoiadendron giganteum HOM05D004855 ORTHO05D005656 1.5e-29 132.9 108 58.3
TPR.G20467 Trifolium pratense HOM05D004855 ORTHO05D005656 1.9e-29 132.5 108 59.3
Rhsim03G0015500 Rhododendron simsii HOM05D004855 ORTHO05D005656 2.5e-29 132.1 85 71.8
Eucgr.K02554 Eucalyptus grandis HOM05D004855 ORTHO05D005656 5.6e-29 131.0 107 61.7
TPR.G2466 Trifolium pratense HOM05D004855 ORTHO05D005656 5.6e-29 131.0 108 58.3
COL.COLO4_29712 Corchorus olitorius HOM05D004855 ORTHO05D005656 9.6e-29 130.2 91 65.9
Os01g0253600 Oryza sativa ssp. japonica HOM05D004855 ORTHO05D005656 2.1e-28 129.0 107 54.2
EL10Ac2g02589 Beta vulgaris HOM05D004855 ORTHO05D005656 3.6e-28 128.3 88 67.0
TPR.G762 Trifolium pratense HOM05D004855 ORTHO05D005656 8.1e-28 127.1 108 57.4
Zm00001eb333640 Zea mays HOM05D004855 ORTHO05D005656 1.8e-27 125.9 107 53.3
ATR0706G105 Amborella trichopoda HOM05D004855 ORTHO05D005656 1.5e-26 122.9 107 54.2
CSS0024102 Camellia sinensis var. sinensis HOM05D004855 ORTHO05D005656 2.6e-26 122.1 86 66.3
Duzib093G1614 Durio zibethinus HOM05D004855 ORTHO05D005656 2.6e-26 122.1 85 63.5
Zm00001eb127650 Zea mays HOM05D004855 ORTHO05D005656 2.6e-26 122.1 107 50.5
A01p10600 Brassica napus HOM05D002603 ORTHO05D002907 7.6e-26 120.6 85 64.7
C01p12540 Brassica napus HOM05D002603 ORTHO05D002907 7.6e-26 120.6 85 64.7
CSS0041239 Camellia sinensis var. sinensis HOM05D004855 ORTHO05D005656 1.7e-25 119.4 86 65.1
Sed0001253 Sechium edule HOM05D004855 ORTHO05D005656 2.2e-25 119.0 85 72.9
CARHR225430 Cardamine hirsuta HOM05D004855 ORTHO05D005656 2.9e-25 118.6 86 59.3
Sabra06G0163300 Salix brachista HOM05D004855 ORTHO05D005656 8.4e-25 117.1 87 64.4
ClCG05G021800 Citrullus lanatus HOM05D004855 ORTHO05D005656 4.2e-24 114.8 85 62.4
Manes.10G061800 Manihot esculenta HOM05D004855 ORTHO05D005656 2.7e-23 112.1 87 56.3
Hund19922 Selenicereus undatus HOM05D004855 ORTHO05D005656 6.0e-23 110.9 86 57.0
Peaxi162Scf00153g00093 Petunia axillaris HOM05D004855 ORTHO05D005656 1.8e-22 109.4 65 80.0
unitig_749.g14301 Utricularia gibba HOM05D004855 ORTHO05D005656 3.0e-22 108.6 71 64.8
HPP92_016958 Vanilla planifolia HOM05D004855 ORTHO05D005656 5.6e-21 104.4 90 55.6
Pp3c2_28010 Physcomitrium patens HOM05D004855 ORTHO05D005656 6.2e-20 100.9 108 46.3
Psat3g176360 Pisum sativum HOM05D004855 ORTHO05D005656 3.1e-19 98.6 87 56.3
Zm00001eb121860 Zea mays HOM05D003776 ORTHO05D005656 6.9e-19 97.4 85 51.8
Mapoly0013s0016 Marchantia polymorpha HOM05D004855 ORTHO05D005656 1.5e-18 96.3 109 44.0
Peaxi162Scf00153g00101 Petunia axillaris HOM05D004855 ORTHO05D005656 2.6e-18 95.5 73 67.1
AagrBONN_evm.TU.Sc2ySwM_362.2757 Anthoceros agrestis HOM05D004855 ORTHO05D005656 3.4e-18 95.1 100 42.0
AagrBONN_evm.TU.Sc2ySwM_117.343 Anthoceros agrestis HOM05D004855 ORTHO05D005656 2.9e-17 92.0 100 41.0
SHI23843 Sapria himalayana HOM05D004855 ORTHO05D005656 4.2e-16 88.2 81 55.6
arahy.Tifrunner.gnm1.ann1.NID4K0 Arachis hypogaea HOM05D004855 ORTHO05D005656 2.7e-15 85.5 58 65.5
CBR_g41290 Chara braunii HOM05D004855 ORTHO05D005656 1.9e-13 79.3 111 41.4
FvH4_2g12760 Fragaria vesca HOM05D004855 ORTHO05D005656 7.4e-13 77.4 79 43.0
MCO11G135 Micromonas commoda HOM05D004855 ORTHO05D005656 2.8e-12 75.5 109 37.6
PRCOL_00005602 Prasinoderma coloniale HOM05D004855 ORTHO05D005656 4.0e-11 71.6 109 38.5
Zm00001eb007300 Zea mays HOM05D004855 ORTHO05D005656 2.5e-08 62.4 64 45.3
Zm00001eb198520 Zea mays HOM05D012833 ORTHO05D005656 2.5e-08 62.4 64 45.3
AUR62041784 Chenopodium quinoa HOM05D003690 ORTHO05D137882 1.0e-06 57.0 41 58.5


User provided reference genes

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