Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G014900 Carya illinoinensis HOM05D002970 ORTHO05D009571 4.3e-69 264.6 142 100.0
CiPaw.11G163100 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.9e-57 225.3 123 100.0
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 6.7e-54 214.2 120 95.8
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 1.8e-22 109.8 106 60.4
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 1.2e-21 107.1 118 57.6
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 2.6e-21 105.9 105 63.8
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 7.7e-18 94.4 123 51.2
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 6.5e-17 91.3 120 51.7
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 6.5e-17 91.3 120 51.7
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 1.9e-16 89.7 120 53.3
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 8.0e-15 84.3 125 49.6
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.0e-14 84.0 120 50.0
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 2.6e-13 79.3 114 45.6
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 6.3e-12 74.7 83 59.0
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 1.1e-11 73.9 128 41.4
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 5.4e-11 71.6 120 40.0
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 5.9e-10 68.2 132 43.9
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 1.0e-09 67.4 107 43.9
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 1.3e-09 67.0 112 42.9
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 1.3e-09 67.0 122 41.0
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 1.3e-09 67.0 128 42.2
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 2.3e-09 66.2 103 48.5
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 5.0e-09 65.1 113 43.4
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 6.6e-09 64.7 126 39.7
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 8.6e-09 64.3 114 41.2
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 1.5e-08 63.5 122 36.1
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 3.3e-08 62.4 184 34.8
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 5.6e-08 61.6 120 39.2
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 1.2e-07 60.5 94 46.8
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 1.2e-07 60.5 96 46.9
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.6e-07 60.1 134 41.0
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 2.1e-07 59.7 110 41.8
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.1e-07 59.7 120 37.5
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 1.4e-06 57.0 100 42.0
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 3.0e-06 55.8 117 38.5
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 4.0e-06 55.5 110 37.3
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 5.2e-06 55.1 101 37.6
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 8.9e-06 54.3 94 42.6


User provided reference genes

Program Settings