Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 5.6e-92 340.9 169 100.0
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 9.1e-74 280.4 158 87.3
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 2.5e-71 272.3 158 84.8
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 1.6e-70 269.6 157 82.2
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 3.6e-70 268.5 157 81.5
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 7.4e-68 260.8 158 77.8
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 9.7e-68 260.4 158 76.6
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 3.7e-67 258.5 158 75.9
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 6.3e-67 257.7 168 74.4
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 1.4e-66 256.5 156 76.3
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 3.1e-66 255.4 166 72.9
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 3.1e-66 255.4 158 75.3
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 4.1e-66 255.0 151 81.5
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 4.1e-66 255.0 164 76.2
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 2.0e-65 252.7 158 75.3
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 3.5e-65 251.9 156 76.9
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 3.5e-65 251.9 156 73.1
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 4.5e-65 251.5 158 76.6
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 5.9e-65 251.1 152 79.6
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 7.7e-65 250.8 164 74.4
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 1.0e-64 250.4 161 75.2
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 1.0e-64 250.4 152 78.9
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 1.0e-64 250.4 156 75.0
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 1.3e-64 250.0 149 79.9
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 2.2e-64 249.2 152 75.0
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 2.2e-64 249.2 158 75.9
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 2.9e-64 248.8 155 74.2
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 2.9e-64 248.8 158 74.1
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 5.0e-64 248.1 152 77.6
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 6.5e-64 247.7 149 80.5
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 8.5e-64 247.3 158 74.1
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 1.4e-63 246.5 158 75.3
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 1.9e-63 246.1 156 72.4
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 1.9e-63 246.1 158 73.4
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 5.5e-63 244.6 158 73.4
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 5.5e-63 244.6 158 73.4
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 7.2e-63 244.2 158 69.6
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 7.2e-63 244.2 158 73.4
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 9.4e-63 243.8 155 75.5
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 1.2e-62 243.4 158 74.1
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 1.6e-62 243.0 158 72.2
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 3.6e-62 241.9 152 75.7
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 4.7e-62 241.5 160 70.6
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 4.7e-62 241.5 158 72.8
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 6.1e-62 241.1 156 73.1
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 6.1e-62 241.1 148 76.4
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 1.0e-61 240.4 149 74.5
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 1.0e-61 240.4 153 74.5
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 1.4e-61 240.0 158 70.9
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 1.8e-61 239.6 163 70.6
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 2.3e-61 239.2 150 74.0
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 3.0e-61 238.8 146 76.7
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 3.0e-61 238.8 152 75.0
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 3.9e-61 238.4 158 69.0
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 3.9e-61 238.4 158 69.6
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 3.9e-61 238.4 158 69.6
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 5.2e-61 238.0 153 73.9
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 5.2e-61 238.0 163 71.2
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 5.2e-61 238.0 158 73.4
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 5.2e-61 238.0 153 73.2
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 5.2e-61 238.0 157 74.5
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 6.7e-61 237.7 153 73.9
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 6.7e-61 237.7 153 73.2
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 1.1e-60 236.9 138 84.1
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 1.5e-60 236.5 156 69.9
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 2.0e-60 236.1 148 76.4
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 2.6e-60 235.7 161 67.1
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 2.6e-60 235.7 164 69.5
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 3.3e-60 235.3 158 69.0
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 3.3e-60 235.3 149 73.2
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 5.7e-60 234.6 154 71.4
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 1.7e-59 233.0 150 74.0
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 4.8e-59 231.5 149 73.2
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 4.8e-59 231.5 154 70.1
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 6.3e-59 231.1 153 72.5
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 1.8e-58 229.6 146 73.3
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 2.4e-58 229.2 152 70.4
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 4.1e-58 228.4 151 68.9
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 4.1e-58 228.4 154 69.5
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 9.1e-58 227.3 160 68.1
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 1.2e-57 226.9 165 66.7
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 1.2e-57 226.9 156 71.8
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 1.6e-57 226.5 162 63.6
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 3.5e-57 225.3 148 70.3
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 7.7e-57 224.2 160 70.0
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 1.9e-55 219.5 157 65.6
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 9.4e-55 217.2 148 71.6
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 2.1e-54 216.1 143 69.9
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 6.1e-54 214.5 146 70.5
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 2.3e-53 212.6 148 65.5
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 3.0e-53 212.2 148 69.6
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 3.0e-53 212.2 148 69.6
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 1.5e-52 209.9 163 65.6
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 1.5e-52 209.9 150 67.3
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 1.5e-52 209.9 157 65.6
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 1.5e-52 209.9 148 65.5
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 2.6e-52 209.1 150 67.3
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 3.3e-52 208.8 144 63.9
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 5.7e-52 208.0 157 65.0
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 1.3e-51 206.8 157 63.7
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 1.7e-51 206.5 157 63.7
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 2.8e-51 205.7 150 66.0
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 2.8e-51 205.7 150 66.0
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 4.8e-51 204.9 150 64.0
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 1.1e-50 203.8 156 64.1
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 1.4e-50 203.4 146 62.3
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 1.4e-50 203.4 150 63.3
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 2.4e-50 202.6 148 65.5
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 2.2e-48 196.1 147 61.2
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 2.9e-48 195.7 145 60.0
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 8.5e-48 194.1 127 71.7
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 1.6e-46 189.9 164 54.3
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 8.8e-45 184.1 157 60.5
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 1.2e-44 183.7 130 67.7
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 1.3e-43 180.3 122 71.3
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 1.2e-38 163.7 131 57.3
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 1.6e-38 163.3 99 73.7
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 2.1e-38 162.9 148 50.7
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 4.0e-37 158.7 116 68.1
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 5.2e-37 158.3 144 52.8
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 2.6e-36 156.0 144 50.7
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 4.4e-36 155.2 135 60.7
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 6.3e-35 151.4 144 50.7
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 8.3e-35 151.0 155 43.2
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 2.9e-32 142.5 143 52.4
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 1.5e-31 140.2 100 63.0
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 4.4e-28 128.6 145 46.2
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 4.9e-27 125.2 113 53.1
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 8.3e-27 124.4 142 45.8
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 7.0e-26 121.3 150 45.3
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 3.9e-24 115.5 151 41.1
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 3.1e-21 105.9 74 66.2
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 5.8e-20 101.7 84 52.4
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 3.7e-19 99.0 85 55.3


User provided reference genes

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