Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 2.9e-277 958.0 501 100.0
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 2.0e-169 599.7 506 66.4
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 9.9e-169 597.4 503 67.4
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 1.5e-164 583.6 528 64.2
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 4.3e-156 555.4 500 64.6
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 1.0e-136 491.1 507 57.2
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 5.5e-127 458.8 500 53.8
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 1.3e-120 437.6 505 52.3
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 2.9e-120 436.4 505 53.7
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 1.1e-119 434.5 501 52.9
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 4.2e-119 432.6 505 52.9
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 8.0e-118 428.3 506 51.6
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 8.8e-117 424.9 504 52.0
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 9.7e-116 421.4 507 51.3
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 9.7e-116 421.4 502 51.2
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 1.3e-115 421.0 506 51.0
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 5.0e-112 409.1 538 48.3
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 5.0e-112 409.1 504 51.8
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 1.9e-111 407.1 503 51.5
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.0e-109 401.4 501 50.7
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 6.8e-109 398.7 502 52.2
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 2.6e-108 396.7 485 50.3
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.1e-106 391.3 510 50.4
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 3.8e-104 382.9 504 48.6
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 1.1e-103 381.3 501 48.1
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 6.6e-96 355.5 505 47.3
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 5.4e-90 335.9 396 52.3
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 1.7e-83 314.3 394 50.0
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 2.9e-83 313.5 491 45.4
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 5.1e-80 302.8 577 39.7
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 2.1e-78 297.4 509 42.6
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 1.4e-77 294.7 531 41.6
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 2.3e-77 293.9 395 48.4
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 3.1e-77 293.5 516 42.8
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 1.5e-76 291.2 515 42.7
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 5.8e-76 289.3 513 41.5
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 2.9e-75 287.0 491 41.5
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 3.7e-75 286.6 347 51.9
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 4.9e-75 286.2 498 42.8
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 6.4e-75 285.8 517 42.2
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 8.3e-75 285.4 503 40.8
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 4.1e-74 283.1 387 48.1
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 7.1e-74 282.3 490 42.0
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.2e-73 281.6 568 39.4
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 2.3e-72 277.3 567 39.2
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 3.9e-72 276.6 491 41.5
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 6.6e-72 275.8 498 41.2
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 1.5e-71 274.6 491 41.1
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 2.5e-71 273.9 491 43.4
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 3.3e-71 273.5 491 43.4
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 1.6e-70 271.2 506 38.7
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 1.4e-69 268.1 550 38.2
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 1.5e-68 264.6 491 40.7
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 2.9e-67 260.4 490 39.8
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 2.4e-66 257.3 492 41.3
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 5.1e-64 249.6 504 40.1
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 2.5e-63 247.3 500 39.8
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 3.3e-63 246.9 521 40.7
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 2.8e-62 243.8 506 38.3
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 2.8e-62 243.8 508 39.0
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 2.8e-62 243.8 368 45.7
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 1.4e-61 241.5 502 36.9
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 2.0e-60 237.7 514 37.4
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 2.3e-56 224.2 358 41.3
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 6.6e-56 222.6 495 35.8
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 1.3e-54 218.4 493 36.3
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 1.6e-54 218.0 492 38.0
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 2.8e-54 217.2 514 35.4
Eucgr.K02060 Eucalyptus grandis HOM05D005512 ORTHO05D006716 2.6e-52 210.7 319 42.9
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 2.9e-51 207.2 431 38.5
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 4.2e-50 203.4 439 36.2
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 5.4e-50 203.0 472 36.7
Psat3g034880 Pisum sativum HOM05D005512 ORTHO05D006716 9.3e-50 202.2 488 35.5
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 1.0e-48 198.7 503 34.8
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 1.0e-48 198.7 293 48.5
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 3.0e-48 197.2 495 35.8
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 2.8e-46 190.7 407 37.3
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.8e-45 188.0 397 37.0
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 1.1e-42 178.7 396 37.6
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 3.2e-42 177.2 386 34.5
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 1.6e-41 174.9 495 34.7
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 2.1e-41 174.5 369 33.9
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 2.1e-41 174.5 388 36.9
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 2.1e-41 174.5 388 36.9
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 1.8e-40 171.4 402 37.3
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 2.3e-40 171.0 336 41.4
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 3.0e-40 170.6 391 37.6
QL07p039646 Quercus lobata HOM05D005512 ORTHO05D006716 3.0e-40 170.6 334 37.7
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 9.6e-39 165.6 424 35.1
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 3.7e-38 163.7 489 32.9
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 2.6e-36 157.5 380 36.8
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 1.3e-35 155.2 503 32.0
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 2.9e-35 154.1 414 34.8
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 1.2e-33 148.7 377 36.3
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 4.6e-33 146.7 388 33.8
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 1.1e-31 142.1 213 46.9
ATR0820G165 Amborella trichopoda HOM05D005512 ORTHO05D006716 4.1e-29 133.7 336 32.7
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 1.1e-26 125.6 395 30.6
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 2.5e-26 124.4 277 36.5
Ca_08983_v3 Cicer arietinum L. HOM05D005512 ORTHO05D006716 7.2e-26 122.9 408 30.9
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 1.2e-25 122.1 429 28.7
Glyma.17G197300 Glycine max HOM05D005512 ORTHO05D006716 1.8e-24 118.2 146 50.0
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 3.7e-22 110.5 476 29.2
Glyma.19G084800 Glycine max HOM05D005512 ORTHO05D006716 1.8e-21 108.2 146 47.9
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 4.1e-21 107.1 339 31.0
Oeu040522.1 Olea europaea HOM05D005512 ORTHO05D006716 1.5e-20 105.1 400 30.5
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 1.7e-19 101.7 369 30.1
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 8.5e-19 99.4 228 38.6
Eucgr.K02061 Eucalyptus grandis HOM05D005512 ORTHO05D006716 1.9e-18 98.2 178 42.7
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 4.2e-18 97.1 311 34.7
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 1.0e-16 92.4 234 34.2
Sopen10g032880 Solanum pennellii HOM05D005512 ORTHO05D006716 6.7e-16 89.7 171 38.0
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 1.1e-15 89.0 129 48.1
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 1.1e-15 89.0 174 39.7
Actinidia02438 Actinidia chinensis HOM05D005512 ORTHO05D006716 2.0e-15 88.2 257 33.5
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 2.6e-15 87.8 83 61.4
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 5.7e-15 86.7 81 60.5
Zm00001eb406920 Zea mays HOM05D005512 ORTHO05D006716 3.1e-13 80.9 72 63.9
Atru.chr8.1591 Acer truncatum HOM05D005512 ORTHO05D006716 1.7e-11 75.1 57 64.9
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 2.9e-11 74.3 135 41.5
SalBow3G2059 Salvia bowleyana HOM05D005512 ORTHO05D006716 2.9e-11 74.3 235 28.5
unitig_22.g5122 Utricularia gibba HOM05D005512 ORTHO05D006716 2.9e-11 74.3 242 32.2
Pp3c14_6250 Physcomitrium patens HOM05D005512 ORTHO05D006716 1.1e-10 72.4 167 34.7
AagrBONN_evm.TU.Sc2ySwM_117.2312 Anthoceros agrestis HOM05D005512 ORTHO05D006716 6.7e-08 63.2 80 50.0
BcaC05g25849 Brassica carinata HOM05D005512 ORTHO05D006716 5.7e-07 60.1 133 39.1
Sc07g0005480 Simmondsia chinensis HOM05D005512 ORTHO05D006716 1.3e-06 58.9 171 37.4
SMO351G0354 Selaginella moellendorffii HOM05D005512 ORTHO05D006716 1.7e-06 58.5 136 38.2
Mapoly0016s0098 Marchantia polymorpha HOM05D005512 ORTHO05D006716 4.8e-06 57.0 126 38.1


User provided reference genes

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