Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 8.6e-106 387.1 211 100.0
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 1.6e-72 276.6 202 78.7
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 4.0e-71 271.9 144 89.6
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 6.9e-71 271.2 210 75.2
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 4.4e-70 268.5 144 86.8
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 4.9e-69 265.0 211 74.9
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 4.9e-69 265.0 210 74.3
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 1.1e-68 263.8 144 86.8
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 1.1e-68 263.8 144 86.8
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 1.4e-68 263.5 141 86.5
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 1.4e-68 263.5 179 74.9
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 1.9e-68 263.1 141 87.2
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 1.9e-68 263.1 208 66.3
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 9.3e-68 260.8 167 77.2
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 9.3e-68 260.8 170 75.3
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 1.6e-67 260.0 144 84.7
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 3.5e-67 258.8 144 85.4
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 4.6e-67 258.5 213 65.7
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 6.0e-67 258.1 144 84.7
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 7.9e-67 257.7 209 67.0
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 1.3e-66 256.9 144 85.4
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 1.3e-66 256.9 200 73.5
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 2.3e-66 256.1 137 88.3
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 2.3e-66 256.1 210 67.1
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 3.0e-66 255.8 222 65.3
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 3.9e-66 255.4 212 65.1
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 3.9e-66 255.4 142 85.9
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 8.7e-66 254.2 182 77.5
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 1.5e-65 253.4 144 84.7
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 1.5e-65 253.4 143 83.9
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 1.9e-65 253.1 218 69.7
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 9.6e-65 250.8 179 70.9
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 1.3e-64 250.4 143 83.2
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 3.6e-64 248.8 175 71.4
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 3.6e-64 248.8 207 66.2
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 4.8e-64 248.4 170 73.5
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 1.4e-63 246.9 203 67.0
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 1.8e-63 246.5 207 65.2
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 1.8e-63 246.5 205 64.9
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 2.4e-63 246.1 145 80.0
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 3.1e-63 245.7 143 82.5
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 4.0e-63 245.4 207 64.3
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 5.3e-63 245.0 145 80.0
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 6.9e-63 244.6 144 79.2
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 9.0e-63 244.2 144 80.6
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 2.0e-62 243.0 180 67.8
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 2.6e-62 242.7 145 78.6
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 7.6e-62 241.1 174 70.7
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 7.6e-62 241.1 179 68.2
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 1.3e-61 240.4 144 77.8
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 2.9e-61 239.2 153 79.7
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.8e-61 238.8 219 61.6
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 4.9e-61 238.4 203 64.5
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 6.4e-61 238.0 137 81.8
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 8.4e-61 237.7 142 78.2
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.1e-60 237.3 140 80.7
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 2.4e-60 236.1 219 60.7
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 4.2e-60 235.3 184 66.3
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 7.1e-60 234.6 146 76.0
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 7.1e-60 234.6 137 79.6
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 7.1e-60 234.6 143 77.6
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 2.1e-59 233.0 137 78.8
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 6.0e-59 231.5 143 77.6
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 6.0e-59 231.5 143 77.6
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 7.9e-59 231.1 219 59.8
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.3e-58 229.6 219 63.0
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 3.0e-58 229.2 174 69.5
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 3.9e-58 228.8 143 76.9
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 5.1e-58 228.4 194 64.4
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 6.7e-58 228.0 143 76.2
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 2.5e-57 226.1 136 77.2
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 3.3e-57 225.7 141 76.6
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 4.3e-57 225.3 143 74.1
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 5.6e-57 224.9 136 76.5
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 7.4e-57 224.6 144 75.7
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 9.6e-57 224.2 141 75.2
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.3e-56 223.8 137 76.6
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 2.1e-56 223.0 137 78.1
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.7e-56 222.2 222 58.6
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 6.2e-56 221.5 144 72.9
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 2.4e-55 219.5 145 73.1
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 1.2e-54 217.2 146 71.2
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 3.4e-54 215.7 119 83.2
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 2.2e-53 213.0 206 58.7
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 1.4e-52 210.3 149 69.1
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 7.4e-49 198.0 270 47.0
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 9.0e-47 191.0 111 79.3
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 2.6e-46 189.5 218 49.1
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 1.7e-45 186.8 114 78.1
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 5.0e-45 185.3 110 77.3
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 2.1e-35 153.3 94 76.6
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 3.6e-35 152.5 94 73.4
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 2.5e-33 146.4 74 87.8
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 4.3e-33 145.6 93 72.0
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 5.7e-33 145.2 93 72.0
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 9.7e-33 144.4 78 87.2
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 1.3e-32 144.1 146 47.9
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 2.0e-30 136.7 163 44.8
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 6.7e-18 95.1 112 42.0
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.5e-12 76.6 120 48.3
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 2.8e-08 63.2 112 43.8
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 3.7e-08 62.8 94 50.0
THA.LOC104826924 Tarenaya hassleriana HOM05D002804 ORTHO05D003755 1.2e-06 57.8 31 87.1
CSS0044668 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.6e-06 57.4 95 47.4


User provided reference genes

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