Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G002200 Carya illinoinensis HOM05D004137 ORTHO05D004804 1.1e-36 156.0 75 100.0
Cfa016445 Carpinus fangiana HOM05D001721 ORTHO05D001804 3.8e-24 114.4 75 76.0
Haze_19423 Corylus avellana HOM05D004137 ORTHO05D004804 8.5e-24 113.2 75 76.0
Gohir.A12G175500 Gossypium hirsutum HOM05D004137 ORTHO05D004804 1.5e-15 85.9 81 58.0
ClCG10G013400 Citrullus lanatus HOM05D004137 ORTHO05D004804 1.9e-15 85.5 64 62.5
MELO3C026884.2 Cucumis melo HOM05D004137 ORTHO05D004804 4.2e-15 84.3 64 62.5
Potri.013G057832 Populus trichocarpa HOM05D004137 ORTHO05D004804 4.2e-15 84.3 78 55.1
Sed0004008 Sechium edule HOM05D004137 ORTHO05D004804 5.5e-15 84.0 64 62.5
Manes.08G144511 Manihot esculenta HOM05D004137 ORTHO05D004804 1.2e-14 82.8 79 58.2
Manes.09G141000 Manihot esculenta HOM05D004137 ORTHO05D004804 1.2e-14 82.8 83 55.4
Potri.013G057766 Populus trichocarpa HOM05D004137 ORTHO05D004804 1.6e-14 82.4 86 53.5
Prupe.7G004500 Prunus persica HOM05D004137 ORTHO05D004804 8.0e-14 80.1 61 63.9
Lsat_1_v5_gn_1_59720 Lactuca sativa HOM05D004137 ORTHO05D004804 1.0e-13 79.7 88 53.4
Migut.J01885 Erythranthe guttata HOM05D004137 ORTHO05D004804 1.4e-13 79.3 53 69.8
Cpa.g.sc51.119 Carica papaya HOM05D004137 ORTHO05D004804 4.0e-13 77.8 85 54.1
CAN.G960.46 Capsicum annuum HOM05D004137 ORTHO05D004804 8.8e-13 76.6 53 69.8
Gohir.D12G178750 Gossypium hirsutum HOM05D004137 ORTHO05D004804 1.5e-12 75.9 53 62.3
Ah.13g075420 Amaranthus hybridus HOM05D004137 ORTHO05D004804 2.0e-12 75.5 66 59.1
Gorai.008G191500 Gossypium raimondii HOM05D004137 ORTHO05D004804 2.0e-12 75.5 82 51.2
FvH4_4g27600 Fragaria vesca HOM05D004137 ORTHO05D004804 3.4e-12 74.7 52 69.2
Solyc10g078570.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 3.4e-12 74.7 53 67.9
PGSC0003DMG400008382 Solanum tuberosum HOM05D004137 ORTHO05D004804 3.4e-12 74.7 53 67.9
Cc06_g23020 Coffea canephora HOM05D004137 ORTHO05D004804 5.7e-12 73.9 55 61.8
Nn7g35858 Nelumbo nucifera HOM05D004137 ORTHO05D004804 5.7e-12 73.9 76 51.3
Ciclev10023092m.g Citrus clementina HOM05D004137 ORTHO05D004804 9.7e-12 73.2 52 63.5
VMungo1383G3601 Vigna mungo HOM05D001721 ORTHO05D001804 1.3e-11 72.8 52 69.2
vmacro20990 Vaccinium macrocarpon HOM05D004137 ORTHO05D004804 3.7e-11 71.2 87 49.4
Phvul.001G111100 Phaseolus vulgaris HOM05D004137 ORTHO05D004804 3.1e-10 68.2 52 65.4
Medtr7g085660 Medicago truncatula HOM05D004137 ORTHO05D004804 1.2e-09 66.2 44 72.7
Lalb_Chr14g0364521 Lupinus albus HOM05D004137 ORTHO05D004804 1.6e-09 65.9 67 55.2
ATR0737G017 Amborella trichopoda HOM05D004137 ORTHO05D004804 2.0e-09 65.5 87 49.4
Glyma.19G112300 Glycine max HOM05D004137 ORTHO05D004804 2.0e-09 65.5 48 66.7
Lj1g0005734 Lotus japonicus HOM05D004137 ORTHO05D004804 2.0e-09 65.5 46 65.2
BcaC05g29894 Brassica carinata HOM05D004137 ORTHO05D004804 3.5e-09 64.7 75 48.0
A05p43490 Brassica napus HOM05D004137 ORTHO05D004804 3.5e-09 64.7 75 48.0
BolC5t34968H Brassica oleracea HOM05D004137 ORTHO05D004804 3.5e-09 64.7 75 48.0
BraA05t23089Z Brassica rapa HOM05D004137 ORTHO05D004804 3.5e-09 64.7 75 48.0
BcaC05g30244 Brassica carinata HOM05D004137 ORTHO05D004804 7.7e-09 63.5 75 48.0
BcaC05g30291 Brassica carinata HOM05D004137 ORTHO05D004804 7.7e-09 63.5 75 48.0
TAR623G1005 Trochodendron aralioides HOM05D004137 ORTHO05D004804 7.7e-09 63.5 55 58.2
Nn2g15861 Nelumbo nucifera HOM05D004137 ORTHO05D004804 2.9e-08 61.6 53 54.7
QL01p003617 Quercus lobata HOM05D004137 ORTHO05D004804 5.0e-08 60.8 53 58.5
PGSC0003DMG400023737 Solanum tuberosum HOM05D004137 ORTHO05D004804 5.0e-08 60.8 79 44.3
Carub.0003s0313 Capsella rubella HOM05D004137 ORTHO05D004804 8.5e-08 60.1 53 52.8
CSS0017288 Camellia sinensis var. sinensis HOM05D004137 ORTHO05D004804 1.5e-07 59.3 53 52.8
MD11G1003200 Malus domestica HOM05D004137 ORTHO05D004804 5.5e-07 57.4 53 50.9
Haze_22939 Corylus avellana HOM05D004137 ORTHO05D004804 7.2e-07 57.0 64 50.0
Prupe.6G003100 Prunus persica HOM05D004137 ORTHO05D004804 1.2e-06 56.2 53 50.9
MD03G1003400 Malus domestica HOM05D004137 ORTHO05D004804 1.6e-06 55.8 53 49.1
Peaxi162Scf00003g04814 Petunia axillaris HOM05D004137 ORTHO05D004804 2.1e-06 55.5 35 74.3
CANSAT11G0501 Cannabis sativa HOM05D004137 ORTHO05D004804 2.7e-06 55.1 53 54.7


User provided reference genes

Program Settings