Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 5.9e-112 407.5 204 100.0
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 9.3e-49 197.6 116 88.8
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 7.4e-46 188.0 125 78.4
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 1.6e-45 186.8 125 76.8
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 1.4e-44 183.7 116 78.4
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 1.8e-44 183.3 138 71.7
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 3.1e-44 182.6 116 77.6
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 4.1e-44 182.2 116 77.6
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.5e-43 180.3 114 78.1
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.5e-43 180.3 114 78.1
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 2.0e-43 179.9 158 62.0
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 2.6e-43 179.5 116 75.9
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 7.6e-43 177.9 116 75.9
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 1.3e-42 177.2 117 78.6
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 1.7e-42 176.8 114 78.1
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 1.7e-42 176.8 114 75.4
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 2.2e-42 176.4 132 68.9
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 3.8e-42 175.6 118 78.0
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 5.0e-42 175.3 138 64.5
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 5.0e-42 175.3 116 75.0
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 5.0e-42 175.3 114 79.8
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 8.5e-42 174.5 116 78.4
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 8.5e-42 174.5 114 76.3
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 1.1e-41 174.1 118 74.6
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 1.9e-41 173.3 115 73.9
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 1.9e-41 173.3 125 72.0
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 1.9e-41 173.3 114 77.2
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 1.9e-41 173.3 130 70.8
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 2.5e-41 172.9 116 73.3
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 3.2e-41 172.6 104 83.7
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 5.5e-41 171.8 127 68.5
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 5.5e-41 171.8 117 74.4
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 5.5e-41 171.8 116 74.1
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 5.5e-41 171.8 116 72.4
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 7.2e-41 171.4 119 68.9
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 9.3e-41 171.0 116 72.4
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 9.3e-41 171.0 117 74.4
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 1.2e-40 170.6 117 73.5
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.2e-40 170.6 119 68.9
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 1.2e-40 170.6 116 72.4
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.2e-40 170.6 103 80.6
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 1.6e-40 170.2 127 67.7
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 2.1e-40 169.9 125 68.8
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 2.1e-40 169.9 125 68.8
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 2.7e-40 169.5 104 79.8
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 2.7e-40 169.5 114 72.8
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 2.7e-40 169.5 128 65.6
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 2.7e-40 169.5 128 65.6
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 3.6e-40 169.1 125 68.0
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 3.6e-40 169.1 115 73.9
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 4.6e-40 168.7 116 73.3
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 4.6e-40 168.7 117 71.8
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 6.1e-40 168.3 137 62.8
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 6.1e-40 168.3 117 71.8
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 6.1e-40 168.3 128 64.1
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 1.0e-39 167.5 137 60.6
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 1.0e-39 167.5 136 62.5
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 1.0e-39 167.5 116 71.6
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 1.3e-39 167.2 164 59.1
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 2.3e-39 166.4 121 72.7
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 2.3e-39 166.4 129 65.1
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 3.0e-39 166.0 127 65.4
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 3.0e-39 166.0 127 65.4
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 3.0e-39 166.0 120 72.5
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 3.9e-39 165.6 127 67.7
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 3.9e-39 165.6 121 70.2
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 3.9e-39 165.6 150 60.0
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 3.9e-39 165.6 120 71.7
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 5.1e-39 165.2 124 68.5
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 8.7e-39 164.5 138 61.6
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 8.7e-39 164.5 116 68.1
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 8.7e-39 164.5 123 66.7
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 1.1e-38 164.1 103 73.8
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 4.3e-38 162.2 104 76.0
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 5.7e-38 161.8 114 73.7
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 7.4e-38 161.4 114 73.7
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.4e-38 161.4 114 73.7
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.4e-38 161.4 114 73.7
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.4e-38 161.4 114 73.7
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.4e-38 161.4 114 73.7
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 7.4e-38 161.4 104 76.9
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 1.3e-37 160.6 127 63.0
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 3.7e-37 159.1 116 69.0
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 3.7e-37 159.1 104 76.0
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 4.8e-37 158.7 104 75.0
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 1.8e-36 156.8 116 68.1
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 1.8e-36 156.8 104 74.0
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 2.4e-36 156.4 102 73.5
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 2.4e-36 156.4 102 74.5
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 2.4e-36 156.4 102 74.5
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 3.1e-36 156.0 102 71.6
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 4.1e-36 155.6 152 55.3
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 5.3e-36 155.2 103 71.8
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 5.3e-36 155.2 104 72.1
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 2.0e-35 153.3 104 71.2
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 4.5e-35 152.1 90 88.9
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 5.9e-35 151.8 104 74.0
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 5.9e-35 151.8 124 63.7
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 5.9e-35 151.8 124 62.1
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 2.2e-34 149.8 102 72.5
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 8.5e-34 147.9 88 81.8
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 1.9e-33 146.7 125 63.2
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 5.5e-33 145.2 116 62.9
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 2.1e-32 143.3 90 80.0
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 6.7e-31 138.3 121 62.8
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 1.5e-30 137.1 127 58.3
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 5.7e-30 135.2 125 57.6
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 1.3e-29 134.0 91 74.7
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 1.3e-29 134.0 102 57.8
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 2.4e-28 129.8 91 69.2
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 3.1e-28 129.4 105 62.9
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.0e-27 126.7 100 64.0
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 2.9e-26 122.9 102 55.9
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.4e-25 120.6 98 65.3
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 1.4e-25 120.6 100 62.0
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 9.4e-25 117.9 101 56.4
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 3.1e-20 102.8 139 40.3
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 7.0e-20 101.7 122 44.3
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 1.9e-17 93.6 128 38.3
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.2e-14 84.3 83 56.6
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 1.5e-14 84.0 98 42.9
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 1.8e-12 77.0 62 66.1
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 7.2e-09 65.1 61 52.5
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 1.5e-06 57.4 81 42.0
Manes.01G158400 Manihot esculenta HOM05D006312 ORTHO05D007843 2.6e-06 56.6 65 55.4


User provided reference genes

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