Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G178100 Carya illinoinensis HOM05D008295 ORTHO05D010471 2.5e-42 174.9 78 100.0
CiPaw.07G008800 Carya illinoinensis HOM05D008295 ORTHO05D010471 9.4e-34 146.4 78 87.2
Eucgr.H04400 Eucalyptus grandis HOM05D008295 ORTHO05D010471 5.5e-26 120.6 78 67.9
Manes.09G157700 Manihot esculenta HOM05D008295 ORTHO05D010471 3.6e-25 117.9 78 67.9
Potri.013G032700 Populus trichocarpa HOM05D008295 ORTHO05D010471 8.8e-24 113.2 78 65.4
TWI56G0380 Tripterygium wilfordii HOM05D008295 ORTHO05D010471 3.7e-22 107.8 78 59.0
PGR004G0687 Punica granatum HOM05D008295 ORTHO05D010471 3.1e-21 104.8 78 61.5
Sabra13G0032600 Salix brachista HOM05D008295 ORTHO05D010471 7.0e-21 103.6 80 61.2
Duzib106G0032 Durio zibethinus HOM05D008295 ORTHO05D010471 1.7e-19 99.0 78 57.7
QL04p009826 Quercus lobata HOM05D008295 ORTHO05D010471 6.6e-19 97.1 77 58.4
Sed0007183 Sechium edule HOM05D008295 ORTHO05D010471 2.5e-18 95.1 73 54.8
AL3G15280 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 5.4e-13 77.4 73 50.7
CSS0021153 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 1.6e-12 75.9 71 50.7
Actinidia30915 Actinidia chinensis HOM05D008295 ORTHO05D010471 2.9e-11 71.6 61 57.4
QL04p009829 Quercus lobata HOM05D008295 ORTHO05D010471 5.0e-11 70.9 49 53.1
CSS0043617 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 1.1e-10 69.7 61 49.2
AT3G04945 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 1.9e-10 68.9 70 44.3
CSS0023258 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 2.1e-09 65.5 67 49.3
BcaC05g29925 Brassica carinata HOM05D008295 ORTHO05D010471 8.0e-09 63.5 78 43.6
A05p42650 Brassica napus HOM05D008295 ORTHO05D010471 8.0e-09 63.5 78 43.6
C05p62320 Brassica napus HOM05D008295 ORTHO05D010471 8.0e-09 63.5 78 42.3
BolC5t34892H Brassica oleracea HOM05D008295 ORTHO05D010471 8.0e-09 63.5 78 43.6
BraA05t22988Z Brassica rapa HOM05D008295 ORTHO05D010471 8.0e-09 63.5 78 43.6
C05p62360 Brassica napus HOM05D008295 ORTHO05D010471 2.3e-08 62.0 78 42.3
C05p62380 Brassica napus HOM05D008295 ORTHO05D010471 2.3e-08 62.0 78 42.3
BolC5t34888H Brassica oleracea HOM05D008295 ORTHO05D010471 2.3e-08 62.0 73 43.8
A05p42640 Brassica napus HOM05D008295 ORTHO05D010471 3.1e-08 61.6 78 42.3
BraA05t22987Z Brassica rapa HOM05D008295 ORTHO05D010471 3.1e-08 61.6 78 42.3
BraA05t22989Z Brassica rapa HOM05D008295 ORTHO05D010471 3.1e-08 61.6 78 42.3
BcaC05g29923 Brassica carinata HOM05D008295 ORTHO05D010471 4.0e-08 61.2 78 41.0
BcaC05g29971 Brassica carinata HOM05D008295 ORTHO05D010471 4.0e-08 61.2 78 42.3
Thhalv10022226m.g Eutrema salsugineum HOM05D008295 ORTHO05D010471 4.0e-08 61.2 78 37.2
CARHR079250 Cardamine hirsuta HOM05D008295 ORTHO05D010471 5.2e-08 60.8 48 47.9
BcaB05g24460 Brassica carinata HOM05D008295 ORTHO05D010471 6.8e-08 60.5 71 42.3
TWI12G0056 Tripterygium wilfordii HOM05D008295 ORTHO05D010471 8.9e-08 60.1 69 33.3
A03p33940 Brassica napus HOM05D008295 ORTHO05D010471 1.2e-07 59.7 74 43.2
BraA03t12569Z Brassica rapa HOM05D008295 ORTHO05D010471 1.2e-07 59.7 74 43.2
BcaC01g04340 Brassica carinata HOM05D008295 ORTHO05D010471 1.5e-07 59.3 74 41.9
C03p41320 Brassica napus HOM05D008295 ORTHO05D010471 1.5e-07 59.3 74 41.9
BolC3t16414H Brassica oleracea HOM05D008295 ORTHO05D010471 1.5e-07 59.3 74 41.9
BcaC01g04341 Brassica carinata HOM05D008295 ORTHO05D010471 7.5e-07 57.0 74 40.5
A02p15960 Brassica napus HOM05D008295 ORTHO05D010471 7.5e-07 57.0 78 39.7
C03p41310 Brassica napus HOM05D008295 ORTHO05D010471 7.5e-07 57.0 74 40.5
C02p26540 Brassica napus HOM05D008295 ORTHO05D010471 9.8e-07 56.6 78 39.7
BcaB04g19287 Brassica carinata HOM05D008295 ORTHO05D010471 1.7e-06 55.8 48 47.9
A03p33930 Brassica napus HOM05D008295 ORTHO05D010471 1.7e-06 55.8 74 41.9
BraA03t12568Z Brassica rapa HOM05D008295 ORTHO05D010471 1.7e-06 55.8 74 41.9
BolC3t16413H Brassica oleracea HOM05D008295 ORTHO05D010471 2.9e-06 55.1 74 39.2


User provided reference genes

Program Settings