Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 1.4e-195 686.0 342 100.0
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 7.0e-158 560.8 342 81.9
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 7.0e-158 560.8 342 81.9
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 4.0e-153 545.0 342 80.1
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 3.4e-152 542.0 342 78.7
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 1.4e-134 483.4 343 71.1
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 1.6e-133 479.9 343 70.8
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 1.0e-132 477.2 343 70.0
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 2.3e-132 476.1 345 70.1
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 1.1e-131 473.8 349 68.8
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 4.3e-131 471.9 349 68.8
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 5.6e-131 471.5 350 68.6
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 2.1e-130 469.5 342 68.4
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 3.6e-130 468.8 342 71.1
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 4.7e-130 468.4 346 69.1
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 6.2e-130 468.0 353 67.1
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 2.4e-129 466.1 347 68.3
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 4.0e-129 465.3 343 68.8
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 2.6e-128 462.6 332 68.1
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 2.6e-128 462.6 297 72.7
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 2.6e-128 462.6 347 68.3
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 8.4e-127 457.6 357 64.7
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 3.2e-126 455.7 343 66.5
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 3.2e-126 455.7 299 74.6
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 5.4e-126 454.9 332 67.5
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 7.1e-126 454.5 342 65.2
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 1.6e-125 453.4 337 68.0
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 2.1e-125 453.0 321 73.8
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 1.3e-124 450.3 361 65.1
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 3.0e-124 449.1 342 64.3
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 3.9e-124 448.7 344 66.6
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 6.6e-124 448.0 345 65.5
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.1e-123 447.2 344 66.6
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 2.5e-123 446.0 354 65.5
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.5e-123 446.0 315 72.4
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 4.3e-123 445.3 347 66.3
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 7.3e-123 444.5 331 65.0
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 9.6e-123 444.1 343 64.7
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.3e-122 443.7 333 66.7
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 2.8e-122 442.6 339 66.4
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 4.8e-122 441.8 363 63.9
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 6.2e-122 441.4 344 64.5
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 6.2e-122 441.4 338 66.9
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 8.1e-122 441.0 338 66.3
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.4e-121 440.3 305 68.5
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 1.8e-121 439.9 347 64.3
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 5.3e-121 438.3 333 67.0
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 9.0e-121 437.6 344 64.0
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.0e-120 436.4 340 63.5
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 2.0e-120 436.4 344 64.0
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 3.4e-120 435.6 314 67.2
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 5.8e-120 434.9 338 64.2
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 5.8e-120 434.9 338 66.6
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 1.7e-119 433.3 340 63.2
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 1.7e-119 433.3 297 70.0
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 2.9e-119 432.6 304 68.4
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 2.9e-119 432.6 332 65.4
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 4.9e-119 431.8 311 71.1
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 4.9e-119 431.8 296 69.9
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 6.4e-119 431.4 348 63.5
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 2.4e-118 429.5 351 63.0
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 3.2e-118 429.1 332 63.0
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 7.1e-118 427.9 340 62.1
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 4.6e-117 425.2 310 68.1
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 7.9e-117 424.5 310 66.8
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 7.9e-117 424.5 335 66.6
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 6.7e-116 421.4 342 61.4
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 6.7e-116 421.4 342 63.7
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 8.7e-116 421.0 323 65.0
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.1e-115 420.6 302 68.2
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.1e-115 420.6 318 64.8
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 5.6e-115 418.3 318 64.5
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 4.8e-114 415.2 304 66.1
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 4.0e-113 412.1 339 61.4
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 5.3e-113 411.8 339 61.4
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 5.8e-112 408.3 348 62.4
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 7.6e-112 407.9 314 63.4
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 4.2e-110 402.1 338 60.7
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 1.2e-109 400.6 318 64.5
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 3.0e-108 396.0 321 60.7
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 1.1e-107 394.0 334 58.7
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 4.3e-107 392.1 298 65.1
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 7.4e-107 391.3 335 59.1
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 7.4e-107 391.3 335 59.1
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 7.4e-107 391.3 345 61.4
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 3.7e-106 389.0 343 60.3
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 3.1e-105 386.0 288 66.0
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 2.0e-104 383.3 329 59.9
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 4.9e-103 378.6 304 61.2
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 6.5e-103 378.3 215 80.0
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 9.3e-102 374.4 268 64.6
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 3.5e-101 372.5 248 72.6
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 1.0e-100 370.9 268 67.2
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 1.1e-99 367.5 308 61.4
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 3.1e-97 359.4 283 66.8
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 6.9e-97 358.2 325 57.5
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 2.9e-95 352.8 254 65.4
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 7.2e-94 348.2 347 53.6
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.7e-90 337.0 294 56.1
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 6.3e-90 335.1 252 69.4
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 1.2e-80 304.3 351 49.3
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 1.5e-67 260.8 303 43.2
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.3e-67 259.6 283 47.3
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 7.5e-67 258.5 378 39.9
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 5.3e-65 252.3 284 46.1
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.9e-63 246.5 224 59.8
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 2.5e-62 243.4 245 51.8
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.4e-60 237.7 224 56.7
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.3e-58 231.1 206 57.8
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 2.4e-57 226.9 248 42.7
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 6.6e-55 218.8 322 41.6
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.1e-49 201.4 273 41.8
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 1.3e-47 194.5 164 55.5
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.7e-42 177.6 367 34.6
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.9e-39 166.4 154 64.3
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.6e-32 144.4 114 57.0
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 7.8e-32 142.1 184 51.1
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 2.8e-21 107.1 115 49.6
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 1.1e-12 78.6 164 37.2
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 1.3e-10 71.6 41 78.0
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 8.4e-10 68.9 101 43.6
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 2.4e-09 67.4 34 85.3


User provided reference genes

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